Click here to switch to the map view.

The map label for this gene is glnM [H]

Identifier: 158423695

GI number: 158423695

Start: 2384222

End: 2384899

Strand: Reverse

Name: glnM [H]

Synonym: AZC_2071

Alternate gene names: 158423695

Gene position: 2384899-2384222 (Counterclockwise)

Preceding gene: 158423696

Following gene: 158423694

Centisome position: 44.41

GC content: 63.13

Gene sequence:

>678_bases
TTGGCCCGCCATGGGGCACGCATGTCCGCCTTTCTCACCCAATCCTCCGAATATCTGCCCATCCTCATCAAGGGGCTGTG
GCTGACCATCGCCGTCACGACGCTGGCGCTGTGCCTGTCCACCGCCCTCGGTCTCGTCTGGGCGCTGCTGCGCACCTCCG
GCGTGCCGATGCTTGCCGCCCCCACGCGGGTGTTCGTGGAACTGGTGCGCGGCGTGCCGATCCTCGTCATCCTGTTCTAC
ATCTATTTCGTCATGCCGGACTTCGGCATCGATCTCTCCGCCTTCCAGGCCGGCGTCATCGGTCTCGCCCTCACCTATTC
CTGCTATATCGGCGAAACCTTCCGTGCCGGGATCGAGGCGGTCGACCGGGGGCAAGTGGAAGCGGCCAAGTCCATCGGCA
TGAAGCGCCCGCTCATGATGCGCCGGGTGATCCTGCCGCAGGCCTTCAAGATCGTGCTGCCGCCCTATGGCAACAACATC
GTCATGCTGCTGAAGGATTCCTCGCAGGTCTCGGTGATCTCGGTGGCCGAGCTGACCATGCAGGGCAAGATGCTGGCGTC
CTCCACCTTCAACAACATGACCATCTTCACGCTGGTGGCCCTGCTCTATCTGTGCCTCACGGTGCCGCTGAACATCGTGA
TGCGCCAGCTCGAACTGCGCCTGGGGAAAGCCCGATGA

Upstream 100 bases:

>100_bases
CGGCCTCTGATCGACAACGCGGGCGGCGCGCCGCGCCGTCCGTTCCCCGGCCCATCGCGCCGGCAAGTACAGGTGCCGCG
ACGGCCCGCCGTCGCATCCG

Downstream 100 bases:

>100_bases
TCCGCTTCGAGGACGTGCACAAGTCCTTCGGGAACCATGAGGTTCTGAAGGGCATCGATGCGGAGGTGGGCAAGGGGCAG
GTGGTCTGCCTCATCGGTCC

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MARHGARMSAFLTQSSEYLPILIKGLWLTIAVTTLALCLSTALGLVWALLRTSGVPMLAAPTRVFVELVRGVPILVILFY
IYFVMPDFGIDLSAFQAGVIGLALTYSCYIGETFRAGIEAVDRGQVEAAKSIGMKRPLMMRRVILPQAFKIVLPPYGNNI
VMLLKDSSQVSVISVAELTMQGKMLASSTFNNMTIFTLVALLYLCLTVPLNIVMRQLELRLGKAR

Sequences:

>Translated_225_residues
MARHGARMSAFLTQSSEYLPILIKGLWLTIAVTTLALCLSTALGLVWALLRTSGVPMLAAPTRVFVELVRGVPILVILFY
IYFVMPDFGIDLSAFQAGVIGLALTYSCYIGETFRAGIEAVDRGQVEAAKSIGMKRPLMMRRVILPQAFKIVLPPYGNNI
VMLLKDSSQVSVISVAELTMQGKMLASSTFNNMTIFTLVALLYLCLTVPLNIVMRQLELRLGKAR
>Mature_224_residues
ARHGARMSAFLTQSSEYLPILIKGLWLTIAVTTLALCLSTALGLVWALLRTSGVPMLAAPTRVFVELVRGVPILVILFYI
YFVMPDFGIDLSAFQAGVIGLALTYSCYIGETFRAGIEAVDRGQVEAAKSIGMKRPLMMRRVILPQAFKIVLPPYGNNIV
MLLKDSSQVSVISVAELTMQGKMLASSTFNNMTIFTLVALLYLCLTVPLNIVMRQLELRLGKAR

Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=35.7487922705314, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1787030, Length=207, Percent_Identity=35.7487922705314, Blast_Score=127, Evalue=5e-31,
Organism=Escherichia coli, GI1787087, Length=229, Percent_Identity=28.3842794759825, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI87082239, Length=211, Percent_Identity=30.8056872037915, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788646, Length=211, Percent_Identity=27.9620853080569, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1786874, Length=228, Percent_Identity=27.6315789473684, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=24.2857142857143, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=28.6384976525822, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788645, Length=205, Percent_Identity=30.2439024390244, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI48994930, Length=125, Percent_Identity=33.6, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24705; Mature: 24574

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARHGARMSAFLTQSSEYLPILIKGLWLTIAVTTLALCLSTALGLVWALLRTSGVPMLAA
CCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PTRVFVELVRGVPILVILFYIYFVMPDFGIDLSAFQAGVIGLALTYSCYIGETFRAGIEA
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDRGQVEAAKSIGMKRPLMMRRVILPQAFKIVLPPYGNNIVMLLKDSSQVSVISVAELTM
HHCCHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCEEHHHHHHHHH
QGKMLASSTFNNMTIFTLVALLYLCLTVPLNIVMRQLELRLGKAR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARHGARMSAFLTQSSEYLPILIKGLWLTIAVTTLALCLSTALGLVWALLRTSGVPMLAA
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PTRVFVELVRGVPILVILFYIYFVMPDFGIDLSAFQAGVIGLALTYSCYIGETFRAGIEA
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDRGQVEAAKSIGMKRPLMMRRVILPQAFKIVLPPYGNNIVMLLKDSSQVSVISVAELTM
HHCCHHHHHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCEEHHHHHHHHH
QGKMLASSTFNNMTIFTLVALLYLCLTVPLNIVMRQLELRLGKAR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7551042; 9384377 [H]