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The map label for this gene is yliB [C]

Identifier: 158423495

GI number: 158423495

Start: 2142752

End: 2144329

Strand: Reverse

Name: yliB [C]

Synonym: AZC_1871

Alternate gene names: 158423495

Gene position: 2144329-2142752 (Counterclockwise)

Preceding gene: 158423496

Following gene: 158423494

Centisome position: 39.93

GC content: 59.51

Gene sequence:

>1578_bases
ATGCAGATCAACCGACGCGAAGCATTGATATGGTCCGCCGCCACGTTGCTGGCGACCACCCGCTCATCCCTGGCTCAGGG
ACGCAGAACGATCCGCATTGCGCCGCACGCCGCACTGCGGGTGCTCGATCCGGTGACCACGAGCGCCTACATCACGCGCA
ACCACGCTTATATGGTCTATGATACCCTTTTCTCGATCGACGCCGCTTATCGGCCGCAGCCTCAGATGGTCAAGGAGTGG
ACCGTCAGCGACGACCAGCTATCCTACACCTTCACGCTTCGGGAGGGCTTACTGTTCCACGATAATCGGCCGGTGACAGC
CGAGGATTGCGTGGCCTCCATTACGAGGTGGGCCAAGAAGGATGTGGTCGGCCTGCGCCTCGCATCCGCAATGTCCGACA
TCAGGCCCCTCGACGACAAAACCTTTCGTATCGCGCTGAAGACGCCATTCGGGCCGACTCTCGAGGCGATGGCCCGTCCG
AGCTCAATTCCGCTGTTCGTGATGCCGCGGCGCATCGCCGAACTGCCGCCGGATAAGCCGCTGGAGGAGGTCGTTGGATC
TGGACCGTTTCGCTTCATCGCTTCTGATTTCCGTCCCGGAGTCAGTTGGGCCTATGAACGTTTCGCCGATTACGTTCCTC
GTGCGGAGCCGCCGGACGGTCTCGCCGGAGGCAAGGTGGTGAAGGTGGACCGCGTGGAGGCGCTCTGGTTTCCCAGTAAG
CAGACGGCCATCAATGCCTTGGCCAAAGGCGAGATCGATCTGCTGGAAAACATGAATGCCGATCAGCGCTCGCTCTTAGA
CGGCGATCGCGGTGTCACGCTCCGCCGGCGCTTTGGCCCCATGGCGTCAACCATACGCTTCAACTGGGCCCAACCACCGT
TTGACAACCTCAAAGCCCGTCAGGCAGTTCAAGCGGTGGTGACACAGCAGGACTATATGGACGCCTCGATCGGCGATCCC
AAATCTTACCAAATATGTCCTGCTCTTTTTGGTTGCGGGACTCAGTTGGAAGTCGATGACGGTTTCCGTGACACAGGCAA
GCCTGACGTCAAAACGGCCCGCGCTCTTCTGAAGGAATCTGGCTACAAGGGCGAAAAGGTCGTCATCATCACCCCCGGCG
ACATCGCATCCTTTGCGCCGCTCGCGCCTCTGACCCAGCAGTTGCTGCAACAGATCGGCATGGCAAGCGAGATCCAGACC
ATGGAATGGAGCACCTTCCTTGCCAGGAGAGCAAAGCCGGGGCCAGTATCCGAAGGTGGTTGGAACATCGCCCATGCGGT
CTTTGATCGGCTCGACCTGATATCTCCGCTCGGCAACCCAAATTTCGATGCCCGAGGAAAGTCGGGATATAGCGGTTTCG
TCGACGATCCCGAGACCACTGATCTCAAAAATCAGTACGAGCGCGCGACCGATCCAGCTCGCCAGAAGGCGATCGCTGCC
GAACTCCAGAAGCGCGCGTACGACCTCGTCTTCTATATTCCGCTCGGCACGTATTACGACTACGAGGCTTTCCGCTCCAA
TGTCACCGGCTACGTGCCCGCACCCGTCATGGTGATGTGGGGAGTGACCAAGGCATGA

Upstream 100 bases:

>100_bases
GCGGCGGCAGCGCCCGGGCCGGCACCTCGTTCTGGCCGGATCCCCGTCGTGGACGGGTCTACTGAACAAATAAGGCCGGC
GGCCACCGAGGGGAATCATC

Downstream 100 bases:

>100_bases
TGACGCGCCTGATCGCCATGCGCATCGCCACCGTCCTTCCCGTTCTTCTCGTCGTAGCGACCATCGTTTTCGTACTCCTG
CGCCTCAGCCCCGGTGACCC

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MQINRREALIWSAATLLATTRSSLAQGRRTIRIAPHAALRVLDPVTTSAYITRNHAYMVYDTLFSIDAAYRPQPQMVKEW
TVSDDQLSYTFTLREGLLFHDNRPVTAEDCVASITRWAKKDVVGLRLASAMSDIRPLDDKTFRIALKTPFGPTLEAMARP
SSIPLFVMPRRIAELPPDKPLEEVVGSGPFRFIASDFRPGVSWAYERFADYVPRAEPPDGLAGGKVVKVDRVEALWFPSK
QTAINALAKGEIDLLENMNADQRSLLDGDRGVTLRRRFGPMASTIRFNWAQPPFDNLKARQAVQAVVTQQDYMDASIGDP
KSYQICPALFGCGTQLEVDDGFRDTGKPDVKTARALLKESGYKGEKVVIITPGDIASFAPLAPLTQQLLQQIGMASEIQT
MEWSTFLARRAKPGPVSEGGWNIAHAVFDRLDLISPLGNPNFDARGKSGYSGFVDDPETTDLKNQYERATDPARQKAIAA
ELQKRAYDLVFYIPLGTYYDYEAFRSNVTGYVPAPVMVMWGVTKA

Sequences:

>Translated_525_residues
MQINRREALIWSAATLLATTRSSLAQGRRTIRIAPHAALRVLDPVTTSAYITRNHAYMVYDTLFSIDAAYRPQPQMVKEW
TVSDDQLSYTFTLREGLLFHDNRPVTAEDCVASITRWAKKDVVGLRLASAMSDIRPLDDKTFRIALKTPFGPTLEAMARP
SSIPLFVMPRRIAELPPDKPLEEVVGSGPFRFIASDFRPGVSWAYERFADYVPRAEPPDGLAGGKVVKVDRVEALWFPSK
QTAINALAKGEIDLLENMNADQRSLLDGDRGVTLRRRFGPMASTIRFNWAQPPFDNLKARQAVQAVVTQQDYMDASIGDP
KSYQICPALFGCGTQLEVDDGFRDTGKPDVKTARALLKESGYKGEKVVIITPGDIASFAPLAPLTQQLLQQIGMASEIQT
MEWSTFLARRAKPGPVSEGGWNIAHAVFDRLDLISPLGNPNFDARGKSGYSGFVDDPETTDLKNQYERATDPARQKAIAA
ELQKRAYDLVFYIPLGTYYDYEAFRSNVTGYVPAPVMVMWGVTKA
>Mature_525_residues
MQINRREALIWSAATLLATTRSSLAQGRRTIRIAPHAALRVLDPVTTSAYITRNHAYMVYDTLFSIDAAYRPQPQMVKEW
TVSDDQLSYTFTLREGLLFHDNRPVTAEDCVASITRWAKKDVVGLRLASAMSDIRPLDDKTFRIALKTPFGPTLEAMARP
SSIPLFVMPRRIAELPPDKPLEEVVGSGPFRFIASDFRPGVSWAYERFADYVPRAEPPDGLAGGKVVKVDRVEALWFPSK
QTAINALAKGEIDLLENMNADQRSLLDGDRGVTLRRRFGPMASTIRFNWAQPPFDNLKARQAVQAVVTQQDYMDASIGDP
KSYQICPALFGCGTQLEVDDGFRDTGKPDVKTARALLKESGYKGEKVVIITPGDIASFAPLAPLTQQLLQQIGMASEIQT
MEWSTFLARRAKPGPVSEGGWNIAHAVFDRLDLISPLGNPNFDARGKSGYSGFVDDPETTDLKNQYERATDPARQKAIAA
ELQKRAYDLVFYIPLGTYYDYEAFRSNVTGYVPAPVMVMWGVTKA

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=519, Percent_Identity=23.5067437379576, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1789966, Length=478, Percent_Identity=25.1046025104602, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787762, Length=455, Percent_Identity=22.6373626373626, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1789887, Length=467, Percent_Identity=21.4132762312634, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58369; Mature: 58369

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQINRREALIWSAATLLATTRSSLAQGRRTIRIAPHAALRVLDPVTTSAYITRNHAYMVY
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCEEEECCCEEEEE
DTLFSIDAAYRPQPQMVKEWTVSDDQLSYTFTLREGLLFHDNRPVTAEDCVASITRWAKK
EHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEEECCEEEECCCCCCHHHHHHHHHHHHHH
DVVGLRLASAMSDIRPLDDKTFRIALKTPFGPTLEAMARPSSIPLFVMPRRIAELPPDKP
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHCCCCCCCEEEECHHHHCCCCCCC
LEEVVGSGPFRFIASDFRPGVSWAYERFADYVPRAEPPDGLAGGKVVKVDRVEALWFPSK
HHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECEEEEECCCH
QTAINALAKGEIDLLENMNADQRSLLDGDRGVTLRRRFGPMASTIRFNWAQPPFDNLKAR
HHHHHHHHCCCHHHHHCCCCCHHHHCCCCCCEEEHHHCCCCCCEEEECCCCCCHHHHHHH
QAVQAVVTQQDYMDASIGDPKSYQICPALFGCGTQLEVDDGFRDTGKPDVKTARALLKES
HHHHHHHHHHHHCCCCCCCCCCCEECHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHC
GYKGEKVVIITPGDIASFAPLAPLTQQLLQQIGMASEIQTMEWSTFLARRAKPGPVSEGG
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
WNIAHAVFDRLDLISPLGNPNFDARGKSGYSGFVDDPETTDLKNQYERATDPARQKAIAA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
ELQKRAYDLVFYIPLGTYYDYEAFRSNVTGYVPAPVMVMWGVTKA
HHHHHHEEEEEEEECCCCCCHHHHHCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MQINRREALIWSAATLLATTRSSLAQGRRTIRIAPHAALRVLDPVTTSAYITRNHAYMVY
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCEEEECCCEEEEE
DTLFSIDAAYRPQPQMVKEWTVSDDQLSYTFTLREGLLFHDNRPVTAEDCVASITRWAKK
EHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEEECCEEEECCCCCCHHHHHHHHHHHHHH
DVVGLRLASAMSDIRPLDDKTFRIALKTPFGPTLEAMARPSSIPLFVMPRRIAELPPDKP
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHCCCCCCCEEEECHHHHCCCCCCC
LEEVVGSGPFRFIASDFRPGVSWAYERFADYVPRAEPPDGLAGGKVVKVDRVEALWFPSK
HHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECEEEEECCCH
QTAINALAKGEIDLLENMNADQRSLLDGDRGVTLRRRFGPMASTIRFNWAQPPFDNLKAR
HHHHHHHHCCCHHHHHCCCCCHHHHCCCCCCEEEHHHCCCCCCEEEECCCCCCHHHHHHH
QAVQAVVTQQDYMDASIGDPKSYQICPALFGCGTQLEVDDGFRDTGKPDVKTARALLKES
HHHHHHHHHHHHCCCCCCCCCCCEECHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHC
GYKGEKVVIITPGDIASFAPLAPLTQQLLQQIGMASEIQTMEWSTFLARRAKPGPVSEGG
CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
WNIAHAVFDRLDLISPLGNPNFDARGKSGYSGFVDDPETTDLKNQYERATDPARQKAIAA
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
ELQKRAYDLVFYIPLGTYYDYEAFRSNVTGYVPAPVMVMWGVTKA
HHHHHHEEEEEEEECCCCCCHHHHHCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]