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The map label for this gene is dppB [C]

Identifier: 158423494

GI number: 158423494

Start: 2141811

End: 2142752

Strand: Reverse

Name: dppB [C]

Synonym: AZC_1870

Alternate gene names: 158423494

Gene position: 2142752-2141811 (Counterclockwise)

Preceding gene: 158423495

Following gene: 158423493

Centisome position: 39.9

GC content: 61.36

Gene sequence:

>942_bases
ATGACGCGCCTGATCGCCATGCGCATCGCCACCGTCCTTCCCGTTCTTCTCGTCGTAGCGACCATCGTTTTCGTACTCCT
GCGCCTCAGCCCCGGTGACCCCGCACAGGTGCTCGCTGGTGAAAATGCCACGCCTGAGGCTCTCTCTAATATCCGGCAGG
AGCTCGGCCTGGATCGATCCTTACCGGTGCAATACGTGACCTGGCTCGTCGAGATGGCTCATGGCAATTTCGGCACCTCA
GTCCTGTCCCGCGTGCCTGTCCTCACTCTGATCCGTGACAGGTTGGAACCGACGATGGTTCTCGCGCTGAGCGCGATCGT
CATCACCGTGCTCCTCGCCGTGCCCCTCGGAGCCTTAGCGGCGTGGCGGCACAATAGCTGGATCGACCGCGGGGTGATGG
TCTTGTCCGTCATCGGCTTTTCCGTCCCGGCCTTCGTCATCGGCTACGTGCTCATTCTGCTGCTGGCAGTTAAAACCGAT
CTGTTTCCGGTGCAGGGATATGTCAGTCCGCTCTCAGATCCCGTGGCGGCGGCGCGGCACCTGTTCCTGCCTTCCGTCAC
CCTAGCGCTGGTCTTCATGGCTCTGATCGCACGCGTCACCCGCTCGAGCGTGCTCGAGGTGCTCGGAGAGGATTTCGTGC
GGACGGCGCGAGCGAAAGGCAACCGGCCCACACGTGTGCTATGGCGGCACGTCCTACCTAATGCCGCGGTGCCGATCATC
ACAGTTGTCGGCCTTGGCCTCGCTTTGCTCATCAGCGGCGTCGTCGTTACGGAAAGCGTGTTCAACATCCCCGGAGTTGG
CCGGTTGACGATCGACGCGATCCTCGCCCGCGATTACCCGGTGGTCCAGGGCCTGATGCTGTTCTTCGCCTCCATATTCA
TCGGCGTGAATCTGTTGATCGACATTGCTTACGTGATCGTCGATCCCCGCATCCGCTATTGA

Upstream 100 bases:

>100_bases
TTCCGCTCGGCACGTATTACGACTACGAGGCTTTCCGCTCCAATGTCACCGGCTACGTGCCCGCACCCGTCATGGTGATG
TGGGGAGTGACCAAGGCATG

Downstream 100 bases:

>100_bases
GGGCCTACCCATGTCCGCTATCGGGAGCATGCAATCCCATGCCCGTCGCCTGCGCTTGGGTGAGCTGCTCGCCAACCCTG
CGCTCCTGTTCGGCGGCACG

Product: binding-protein-dependent transporters inner membrane component

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MTRLIAMRIATVLPVLLVVATIVFVLLRLSPGDPAQVLAGENATPEALSNIRQELGLDRSLPVQYVTWLVEMAHGNFGTS
VLSRVPVLTLIRDRLEPTMVLALSAIVITVLLAVPLGALAAWRHNSWIDRGVMVLSVIGFSVPAFVIGYVLILLLAVKTD
LFPVQGYVSPLSDPVAAARHLFLPSVTLALVFMALIARVTRSSVLEVLGEDFVRTARAKGNRPTRVLWRHVLPNAAVPII
TVVGLGLALLISGVVVTESVFNIPGVGRLTIDAILARDYPVVQGLMLFFASIFIGVNLLIDIAYVIVDPRIRY

Sequences:

>Translated_313_residues
MTRLIAMRIATVLPVLLVVATIVFVLLRLSPGDPAQVLAGENATPEALSNIRQELGLDRSLPVQYVTWLVEMAHGNFGTS
VLSRVPVLTLIRDRLEPTMVLALSAIVITVLLAVPLGALAAWRHNSWIDRGVMVLSVIGFSVPAFVIGYVLILLLAVKTD
LFPVQGYVSPLSDPVAAARHLFLPSVTLALVFMALIARVTRSSVLEVLGEDFVRTARAKGNRPTRVLWRHVLPNAAVPII
TVVGLGLALLISGVVVTESVFNIPGVGRLTIDAILARDYPVVQGLMLFFASIFIGVNLLIDIAYVIVDPRIRY
>Mature_312_residues
TRLIAMRIATVLPVLLVVATIVFVLLRLSPGDPAQVLAGENATPEALSNIRQELGLDRSLPVQYVTWLVEMAHGNFGTSV
LSRVPVLTLIRDRLEPTMVLALSAIVITVLLAVPLGALAAWRHNSWIDRGVMVLSVIGFSVPAFVIGYVLILLLAVKTDL
FPVQGYVSPLSDPVAAARHLFLPSVTLALVFMALIARVTRSSVLEVLGEDFVRTARAKGNRPTRVLWRHVLPNAAVPIIT
VVGLGLALLISGVVVTESVFNIPGVGRLTIDAILARDYPVVQGLMLFFASIFIGVNLLIDIAYVIVDPRIRY

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=38.5756676557863, Blast_Score=235, Evalue=3e-63,
Organism=Escherichia coli, GI1787053, Length=314, Percent_Identity=39.4904458598726, Blast_Score=233, Evalue=2e-62,
Organism=Escherichia coli, GI1789888, Length=315, Percent_Identity=37.4603174603175, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1787497, Length=315, Percent_Identity=33.6507936507937, Blast_Score=188, Evalue=4e-49,
Organism=Escherichia coli, GI1787761, Length=315, Percent_Identity=38.4126984126984, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1788504, Length=354, Percent_Identity=27.9661016949153, Blast_Score=144, Evalue=8e-36,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=28.2051282051282, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33871; Mature: 33740

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLIAMRIATVLPVLLVVATIVFVLLRLSPGDPAQVLAGENATPEALSNIRQELGLDRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCC
LPVQYVTWLVEMAHGNFGTSVLSRVPVLTLIRDRLEPTMVLALSAIVITVLLAVPLGALA
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AWRHNSWIDRGVMVLSVIGFSVPAFVIGYVLILLLAVKTDLFPVQGYVSPLSDPVAAARH
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHH
LFLPSVTLALVFMALIARVTRSSVLEVLGEDFVRTARAKGNRPTRVLWRHVLPNAAVPII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
TVVGLGLALLISGVVVTESVFNIPGVGRLTIDAILARDYPVVQGLMLFFASIFIGVNLLI
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DIAYVIVDPRIRY
HHHHHHCCCCCCC
>Mature Secondary Structure 
TRLIAMRIATVLPVLLVVATIVFVLLRLSPGDPAQVLAGENATPEALSNIRQELGLDRS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCC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HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]