| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yuiH [H]
Identifier: 158423149
GI number: 158423149
Start: 1736311
End: 1737093
Strand: Direct
Name: yuiH [H]
Synonym: AZC_1525
Alternate gene names: 158423149
Gene position: 1736311-1737093 (Clockwise)
Preceding gene: 158423148
Following gene: 158423151
Centisome position: 32.33
GC content: 67.18
Gene sequence:
>783_bases GTGCGTGCGTACAAGGCTGCGCGCGCGACGCATGCTAGGATGGACCATGACTGGGAAACGCGCCGCTGCGCCGCAGTGCG CCCCGTGCGGGAGAGAGCCATGACCGACGTCCGCCCCGACGCGCCCGAAACGGCACCGGACCTGCCCGAGAGCAAGCTGA CCGCGACCAAGCAGAAATGGGCGCGGGAAGGCCGCTTCCTCACCGGGCGTGTCGCCCGGACGGGCGAGGACCGCCTGCCG CCCGGCCAGCATCTGGTGAAGGACTGGCCGGTCCTCGACCTTGGGCTGCAGCCCGAAGTCCCGCTGAACGCCTGGGCGCT GGACGTGGACGGCCTGGTGGCCCATCCCGCGCATTGGGACTGGTCTGCCTTCAAGGCGCAGCCGCAATCCGATCTCGTGA CGGACATCCATTGCGTCACCACCTGGTCGCGCTATGACAATCGCTGGGATGGCCTGCTCACCCGCGACCTCATGGCCATG GTGGAGCCGCTGCCGAGCGCGCGCTTCGTGGTGATGCATTCCTATGACGGCTACACCACCAACGTGCCCATCGAGGATTT CGCCGCCGAGGACGCCCTTCTGGCCCATTCCTGGGAGGGGCAACCGCTCACGCGCGCCCATGGAGGTCCGGTGCGGGTGG TGATCCCGCATCTTTATTTCTGGAAGAGCGCCAAGTGGGTGAAGCGCATCGAATTCATCCCTGCCGATCGGCTCGGCTTC TGGGAAGTGCGCGGCTATCACGAGCGCGGCGATCCCTGGACCGAGCAGCGCTATTCGGAGTGA
Upstream 100 bases:
>100_bases GACCATTCCGCCCGTCTGCGGTCCTACGAAATCCTGAGCACCCTCGATATCGCGGCGCCGGTGCCGGCCTTGTCCTGAGC GCTGCGTCCAGCCGCAAATC
Downstream 100 bases:
>100_bases GCGGGCGGCGCGGGTCGCGGAAGGTCAGGCGTTCACCGACCGGGCCGTGTCGAGGCCGGAGCGGGGCGTTTCGGGAGGCG CTCGCCTGGGAAGGTCCGGC
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRAYKAARATHARMDHDWETRRCAAVRPVRERAMTDVRPDAPETAPDLPESKLTATKQKWAREGRFLTGRVARTGEDRLP PGQHLVKDWPVLDLGLQPEVPLNAWALDVDGLVAHPAHWDWSAFKAQPQSDLVTDIHCVTTWSRYDNRWDGLLTRDLMAM VEPLPSARFVVMHSYDGYTTNVPIEDFAAEDALLAHSWEGQPLTRAHGGPVRVVIPHLYFWKSAKWVKRIEFIPADRLGF WEVRGYHERGDPWTEQRYSE
Sequences:
>Translated_260_residues MRAYKAARATHARMDHDWETRRCAAVRPVRERAMTDVRPDAPETAPDLPESKLTATKQKWAREGRFLTGRVARTGEDRLP PGQHLVKDWPVLDLGLQPEVPLNAWALDVDGLVAHPAHWDWSAFKAQPQSDLVTDIHCVTTWSRYDNRWDGLLTRDLMAM VEPLPSARFVVMHSYDGYTTNVPIEDFAAEDALLAHSWEGQPLTRAHGGPVRVVIPHLYFWKSAKWVKRIEFIPADRLGF WEVRGYHERGDPWTEQRYSE >Mature_260_residues MRAYKAARATHARMDHDWETRRCAAVRPVRERAMTDVRPDAPETAPDLPESKLTATKQKWAREGRFLTGRVARTGEDRLP PGQHLVKDWPVLDLGLQPEVPLNAWALDVDGLVAHPAHWDWSAFKAQPQSDLVTDIHCVTTWSRYDNRWDGLLTRDLMAM VEPLPSARFVVMHSYDGYTTNVPIEDFAAEDALLAHSWEGQPLTRAHGGPVRVVIPHLYFWKSAKWVKRIEFIPADRLGF WEVRGYHERGDPWTEQRYSE
Specific function: Unknown
COG id: COG2041
COG function: function code R; Sulfite oxidase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000572 [H]
Pfam domain/function: PF00174 Oxidored_molyb [H]
EC number: NA
Molecular weight: Translated: 29951; Mature: 29951
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAYKAARATHARMDHDWETRRCAAVRPVRERAMTDVRPDAPETAPDLPESKLTATKQKW CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH AREGRFLTGRVARTGEDRLPPGQHLVKDWPVLDLGLQPEVPLNAWALDVDGLVAHPAHWD HHCCCEEEEEEECCCCCCCCCCHHHHHCCCEEEECCCCCCCCCEEEEECCCEEECCCCCC WSAFKAQPQSDLVTDIHCVTTWSRYDNRWDGLLTRDLMAMVEPLPSARFVVMHSYDGYTT HHHHCCCCCCHHHHHHHEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEE NVPIEDFAAEDALLAHSWEGQPLTRAHGGPVRVVIPHLYFWKSAKWVKRIEFIPADRLGF CCCHHHHHCCCHHEEECCCCCCCCCCCCCCEEEEECCHHHHCCHHHHHHHHCCCCCCCCE WEVRGYHERGDPWTEQRYSE EEECCCCCCCCCHHHHCCCC >Mature Secondary Structure MRAYKAARATHARMDHDWETRRCAAVRPVRERAMTDVRPDAPETAPDLPESKLTATKQKW CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH AREGRFLTGRVARTGEDRLPPGQHLVKDWPVLDLGLQPEVPLNAWALDVDGLVAHPAHWD HHCCCEEEEEEECCCCCCCCCCHHHHHCCCEEEECCCCCCCCCEEEEECCCEEECCCCCC WSAFKAQPQSDLVTDIHCVTTWSRYDNRWDGLLTRDLMAMVEPLPSARFVVMHSYDGYTT HHHHCCCCCCHHHHHHHEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEE NVPIEDFAAEDALLAHSWEGQPLTRAHGGPVRVVIPHLYFWKSAKWVKRIEFIPADRLGF CCCHHHHHCCCHHEEECCCCCCCCCCCCCCEEEEECCHHHHCCHHHHHHHHCCCCCCCCE WEVRGYHERGDPWTEQRYSE EEECCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]