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The map label for this gene is intF [C]

Identifier: 158423151

GI number: 158423151

Start: 1738179

End: 1739594

Strand: Direct

Name: intF [C]

Synonym: AZC_1527

Alternate gene names: 158423151

Gene position: 1738179-1739594 (Clockwise)

Preceding gene: 158423149

Following gene: 158423152

Centisome position: 32.37

GC content: 61.72

Gene sequence:

>1416_bases
ATGGGCTACCAGATTGGGCTACCCGTGGGCTACCGGGAGGAATCGAAGGCGGCTCCGATGGGTCTGGACAGGCGCTATCT
CAAGAAGCATGGCAACCAATGGATTGTGGTCATCAAGGTGCCCGACAGGCTGCGCCACATCGTCGGAAAAGCGCATCTGA
AGGTCCCCTTGCACACGGACAGCCTCGCCATCGCCAACCGGGAGAAGTTCAGGATCGTCGCTGACATGAAGGCTCGGCTT
CAGCGGGCGGAGGAGCAACGCAAGAGCCGGGCCGGCCTTGTTTCAGATCCCCTTATTGAGGAGGCCCTTCAGTGGCGGGA
GAGCATTGCTGTTGCCGAGGCTGATCCCGGCCCCTTCATTTACGATGACGACGACGTGACCGAGGATGCGAGGGACGTCA
CCCTTTCTTTACTGCGTGATCGGGCCGAGGAGATCGCGCGGAAGGAGGGGCTTAAGAAGGCTGATGACTTTCATGCCATC
GCCAAGGGCAAGGCGACCCCAATCCTGCCGATGATCGACAAATGGTTGGCCGAGAGGCCAATGAAGCCACGACAGCAGAC
CGACTATCGCAGGGCGGCTCTCAAGTTCACCTCGTGGCTGACGGTGAAGAACGAGACGGCGGCCGTCGAGCGGATCACGA
GAAAGCTTGCCGGAAGGTACATCACGGAATCGTTCGTCGAGACCGGAGTGAACCCGCGCACCGCCAACAAGGACATCTCC
TGCCTTTCGTCCTTCTGGAAGTGGCTGGAGCGGAAAGGGCACGTCGAGGACAATGTCTGGGCGCGGCAGTCTCTGGCGAA
GCGTGAGCCTCCGAAGGCCGAAGCAAAGCGGCCCTACACAGATGACGAGATGAGGGCGCTGTTCGGTGGGGCGCCGAGCG
TTCTTCTTCGCGACATGATGGCGATTGCCGCACTCTCGGGGATGCGCGTGGAGGAGATTGCGCGGCTCACCGTCGCCGAC
ATCTTCAACGGCTGCTTCGACATCACCGAGGCCAAGACGAAGGCGGGCGTGCGCATGGTGCCAATTCATCCTGCGCTCGA
TGGCATCGTTTCCCGGCGGACGAAGGACAAGGCTCCATCCGCGCCGCTGTTCCCAGAGCTGCCGATCCCCAAGCCCGGTT
CACCCATCGAGCGGTCGCAGAAGGTGGTGAAGGCATTCACCGCATACCGGAGGAAGATTGGCGTGGACGATGTGCCGAAA
GCAGCCCGTCAGTCCCGCGTGGATTTTCACAGCTTCCGGCGCTGGTTCGTCACCAAGGCTGAGCAGGCCCATCAGCCTGT
TCACTTCATCGAGGCTCTGGTCGGTCATAAGAGGTCGGGCATGACCCTCGGGCGCTATTCGGAAGGGCCGCTCGTGCAGC
AGATGCGGGCTGTGGTGGAGGCGGTGCAGCTACCCACGGGCTGTCTGGTCGAGTGA

Upstream 100 bases:

>100_bases
TTGCGAAAGTGCGGAAGCTCTGGCTGGGGCGCCAGGAACATCAGGGTGAGAAGTGTCGAGGCGTTGAAAGCGTTGGAAAT
GTTGAATTTCAGGGCTTGAG

Downstream 100 bases:

>100_bases
ATGGCTTGGTGTCGGGGCGGTGGACCAGTGACGCTATCAGACGTAGCAGCGCAGGCTTGGGAGGCGCAACGGGCCATTCA
GCAGCTTCAGCCGCAGCCCT

Product: phage integrase

Products: NA

Alternate protein names: Phage Integrase; Phage Integrase Family Protein; Integrase; Site-Specific Recombinase Phage Integrase Family

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MGYQIGLPVGYREESKAAPMGLDRRYLKKHGNQWIVVIKVPDRLRHIVGKAHLKVPLHTDSLAIANREKFRIVADMKARL
QRAEEQRKSRAGLVSDPLIEEALQWRESIAVAEADPGPFIYDDDDVTEDARDVTLSLLRDRAEEIARKEGLKKADDFHAI
AKGKATPILPMIDKWLAERPMKPRQQTDYRRAALKFTSWLTVKNETAAVERITRKLAGRYITESFVETGVNPRTANKDIS
CLSSFWKWLERKGHVEDNVWARQSLAKREPPKAEAKRPYTDDEMRALFGGAPSVLLRDMMAIAALSGMRVEEIARLTVAD
IFNGCFDITEAKTKAGVRMVPIHPALDGIVSRRTKDKAPSAPLFPELPIPKPGSPIERSQKVVKAFTAYRRKIGVDDVPK
AARQSRVDFHSFRRWFVTKAEQAHQPVHFIEALVGHKRSGMTLGRYSEGPLVQQMRAVVEAVQLPTGCLVE

Sequences:

>Translated_471_residues
MGYQIGLPVGYREESKAAPMGLDRRYLKKHGNQWIVVIKVPDRLRHIVGKAHLKVPLHTDSLAIANREKFRIVADMKARL
QRAEEQRKSRAGLVSDPLIEEALQWRESIAVAEADPGPFIYDDDDVTEDARDVTLSLLRDRAEEIARKEGLKKADDFHAI
AKGKATPILPMIDKWLAERPMKPRQQTDYRRAALKFTSWLTVKNETAAVERITRKLAGRYITESFVETGVNPRTANKDIS
CLSSFWKWLERKGHVEDNVWARQSLAKREPPKAEAKRPYTDDEMRALFGGAPSVLLRDMMAIAALSGMRVEEIARLTVAD
IFNGCFDITEAKTKAGVRMVPIHPALDGIVSRRTKDKAPSAPLFPELPIPKPGSPIERSQKVVKAFTAYRRKIGVDDVPK
AARQSRVDFHSFRRWFVTKAEQAHQPVHFIEALVGHKRSGMTLGRYSEGPLVQQMRAVVEAVQLPTGCLVE
>Mature_470_residues
GYQIGLPVGYREESKAAPMGLDRRYLKKHGNQWIVVIKVPDRLRHIVGKAHLKVPLHTDSLAIANREKFRIVADMKARLQ
RAEEQRKSRAGLVSDPLIEEALQWRESIAVAEADPGPFIYDDDDVTEDARDVTLSLLRDRAEEIARKEGLKKADDFHAIA
KGKATPILPMIDKWLAERPMKPRQQTDYRRAALKFTSWLTVKNETAAVERITRKLAGRYITESFVETGVNPRTANKDISC
LSSFWKWLERKGHVEDNVWARQSLAKREPPKAEAKRPYTDDEMRALFGGAPSVLLRDMMAIAALSGMRVEEIARLTVADI
FNGCFDITEAKTKAGVRMVPIHPALDGIVSRRTKDKAPSAPLFPELPIPKPGSPIERSQKVVKAFTAYRRKIGVDDVPKA
ARQSRVDFHSFRRWFVTKAEQAHQPVHFIEALVGHKRSGMTLGRYSEGPLVQQMRAVVEAVQLPTGCLVE

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53158; Mature: 53027

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYQIGLPVGYREESKAAPMGLDRRYLKKHGNQWIVVIKVPDRLRHIVGKAHLKVPLHTD
CCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHEEEEECCC
SLAIANREKFRIVADMKARLQRAEEQRKSRAGLVSDPLIEEALQWRESIAVAEADPGPFI
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCCCCEE
YDDDDVTEDARDVTLSLLRDRAEEIARKEGLKKADDFHAIAKGKATPILPMIDKWLAERP
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCC
MKPRQQTDYRRAALKFTSWLTVKNETAAVERITRKLAGRYITESFVETGVNPRTANKDIS
CCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
CLSSFWKWLERKGHVEDNVWARQSLAKREPPKAEAKRPYTDDEMRALFGGAPSVLLRDMM
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
AIAALSGMRVEEIARLTVADIFNGCFDITEAKTKAGVRMVPIHPALDGIVSRRTKDKAPS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCC
APLFPELPIPKPGSPIERSQKVVKAFTAYRRKIGVDDVPKAARQSRVDFHSFRRWFVTKA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHH
EQAHQPVHFIEALVGHKRSGMTLGRYSEGPLVQQMRAVVEAVQLPTGCLVE
HHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GYQIGLPVGYREESKAAPMGLDRRYLKKHGNQWIVVIKVPDRLRHIVGKAHLKVPLHTD
CEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHHHHHHHHHEEEEECCC
SLAIANREKFRIVADMKARLQRAEEQRKSRAGLVSDPLIEEALQWRESIAVAEADPGPFI
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEECCCCCEE
YDDDDVTEDARDVTLSLLRDRAEEIARKEGLKKADDFHAIAKGKATPILPMIDKWLAERP
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCC
MKPRQQTDYRRAALKFTSWLTVKNETAAVERITRKLAGRYITESFVETGVNPRTANKDIS
CCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
CLSSFWKWLERKGHVEDNVWARQSLAKREPPKAEAKRPYTDDEMRALFGGAPSVLLRDMM
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
AIAALSGMRVEEIARLTVADIFNGCFDITEAKTKAGVRMVPIHPALDGIVSRRTKDKAPS
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCC
APLFPELPIPKPGSPIERSQKVVKAFTAYRRKIGVDDVPKAARQSRVDFHSFRRWFVTKA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHH
EQAHQPVHFIEALVGHKRSGMTLGRYSEGPLVQQMRAVVEAVQLPTGCLVE
HHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA