| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yhbW [H]
Identifier: 158423148
GI number: 158423148
Start: 1735284
End: 1736288
Strand: Direct
Name: yhbW [H]
Synonym: AZC_1524
Alternate gene names: 158423148
Gene position: 1735284-1736288 (Clockwise)
Preceding gene: 158423146
Following gene: 158423149
Centisome position: 32.32
GC content: 67.86
Gene sequence:
>1005_bases ATGACCAAGCTTTCCATTCTTGATCTTGCCCCCATTCCACAGGGCGCGACCGCTCGCGATGCGCTCCAGCGCAGCCTCGA TCTTGCCCAGCATGCGGAAGGGTGGGGCTACAATCGCTTCTGGGTGGCCGAGCACCACAATATGGTGGGCATCGCCAGCG CCGCGACCTCGGTCGTCATCGGCTATCTGGCCGACGGCACGCGGAAGATTCGCGTGGGTGCTGGCGGCATCATGCTGCCC AATCATTCCCCACTGGTGATCGCCGAGCAGTTCGGCACGCTGGAGGCCCTCTATCCCGGTCGCATCGACCTCGGCCTCGG TCGCGCGCCGGGCACCGACCAATGGACGATGCGCGCGTTGCGCCGCGATCCGCGCGCCGCCGACACCTTCCCGCAGGATG TGCTGGAGCTTCAGGCCCTGCTCGGTCCGGCTCAGCCGGACCAGCGGCTGCGGGCGGTGCCCGGTACGGGTGCCGAGGTG CCGCTCTGGATTCTCGGCTCCAGCCTCTTCGGTGCGCAGCTCGCCGGCATGCTGGGCCTGCCCTATGCCTTCGCCTCGCA TTTCGCGCCGGAGCTTCTGATCCAGGCGCTGGACACCTATCGCGCCCGGTTCGAGCCTTCGCGCCAGTTGCAGAAGCCCC ATGCGATGGTGGGCGTGCCGGTGGTGGTGGCGGAGACGGATGCCGAGGCGCGGCGCCTCTTCACCTCCACCCAGCAGAGC TTCACCCACATGTTCCGCGGCACGCGCGGCCAGCTGCCCCCGCCCATCGACGATATCGAGACCTACTGGACGCCGATGGA GAAGGTGCAGGTGCAGGGCATGCTCGGGCGGGCCATCGTCGGCGGGCCGGCGACCGTGGAAACCGGACTGAAGGCCCTCA TCGCCGAGACGCAGGCGGACGAACTGATGGTGGCTTCCGCCATCTTCGACCATTCCGCCCGTCTGCGGTCCTACGAAATC CTGAGCACCCTCGATATCGCGGCGCCGGTGCCGGCCTTGTCCTGA
Upstream 100 bases:
>100_bases TGCAGGTTCGCGTGATTTTCGCAATTGCTTCGTCGCCCTTGCAAAACAGCGCCCGTGATCTGATCTGAAAGGAAAGCGGG GGCTGGCGCGGGACCTTTCA
Downstream 100 bases:
>100_bases GCGCTGCGTCCAGCCGCAAATCGTGCGTGCGTACAAGGCTGCGCGCGCGACGCATGCTAGGATGGACCATGACTGGGAAA CGCGCCGCTGCGCCGCAGTG
Product: flavin dependant oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTKLSILDLAPIPQGATARDALQRSLDLAQHAEGWGYNRFWVAEHHNMVGIASAATSVVIGYLADGTRKIRVGAGGIMLP NHSPLVIAEQFGTLEALYPGRIDLGLGRAPGTDQWTMRALRRDPRAADTFPQDVLELQALLGPAQPDQRLRAVPGTGAEV PLWILGSSLFGAQLAGMLGLPYAFASHFAPELLIQALDTYRARFEPSRQLQKPHAMVGVPVVVAETDAEARRLFTSTQQS FTHMFRGTRGQLPPPIDDIETYWTPMEKVQVQGMLGRAIVGGPATVETGLKALIAETQADELMVASAIFDHSARLRSYEI LSTLDIAAPVPALS
Sequences:
>Translated_334_residues MTKLSILDLAPIPQGATARDALQRSLDLAQHAEGWGYNRFWVAEHHNMVGIASAATSVVIGYLADGTRKIRVGAGGIMLP NHSPLVIAEQFGTLEALYPGRIDLGLGRAPGTDQWTMRALRRDPRAADTFPQDVLELQALLGPAQPDQRLRAVPGTGAEV PLWILGSSLFGAQLAGMLGLPYAFASHFAPELLIQALDTYRARFEPSRQLQKPHAMVGVPVVVAETDAEARRLFTSTQQS FTHMFRGTRGQLPPPIDDIETYWTPMEKVQVQGMLGRAIVGGPATVETGLKALIAETQADELMVASAIFDHSARLRSYEI LSTLDIAAPVPALS >Mature_333_residues TKLSILDLAPIPQGATARDALQRSLDLAQHAEGWGYNRFWVAEHHNMVGIASAATSVVIGYLADGTRKIRVGAGGIMLPN HSPLVIAEQFGTLEALYPGRIDLGLGRAPGTDQWTMRALRRDPRAADTFPQDVLELQALLGPAQPDQRLRAVPGTGAEVP LWILGSSLFGAQLAGMLGLPYAFASHFAPELLIQALDTYRARFEPSRQLQKPHAMVGVPVVVAETDAEARRLFTSTQQSF THMFRGTRGQLPPPIDDIETYWTPMEKVQVQGMLGRAIVGGPATVETGLKALIAETQADELMVASAIFDHSARLRSYEIL STLDIAAPVPALS
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=318, Percent_Identity=57.8616352201258, Blast_Score=384, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 36101; Mature: 35970
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLSILDLAPIPQGATARDALQRSLDLAQHAEGWGYNRFWVAEHHNMVGIASAATSVVI CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHH GYLADGTRKIRVGAGGIMLPNHSPLVIAEQFGTLEALYPGRIDLGLGRAPGTDQWTMRAL HEECCCCEEEEECCCEEECCCCCCEEEEECCCCEEEECCCCEEECCCCCCCCHHHHHHHH RRDPRAADTFPQDVLELQALLGPAQPDQRLRAVPGTGAEVPLWILGSSLFGAQLAGMLGL HCCCCCCCCCHHHHHHHHHHHCCCCCCHHHEECCCCCCCCEEEEECCHHHHHHHHHHHCC PYAFASHFAPELLIQALDTYRARFEPSRQLQKPHAMVGVPVVVAETDAEARRLFTSTQQS HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEECCEEEEECCCHHHHHHHHHHHHH FTHMFRGTRGQLPPPIDDIETYWTPMEKVQVQGMLGRAIVGGPATVETGLKALIAETQAD HHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCHH ELMVASAIFDHSARLRSYEILSTLDIAAPVPALS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TKLSILDLAPIPQGATARDALQRSLDLAQHAEGWGYNRFWVAEHHNMVGIASAATSVVI CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHH GYLADGTRKIRVGAGGIMLPNHSPLVIAEQFGTLEALYPGRIDLGLGRAPGTDQWTMRAL HEECCCCEEEEECCCEEECCCCCCEEEEECCCCEEEECCCCEEECCCCCCCCHHHHHHHH RRDPRAADTFPQDVLELQALLGPAQPDQRLRAVPGTGAEVPLWILGSSLFGAQLAGMLGL HCCCCCCCCCHHHHHHHHHHHCCCCCCHHHEECCCCCCCCEEEEECCHHHHHHHHHHHCC PYAFASHFAPELLIQALDTYRARFEPSRQLQKPHAMVGVPVVVAETDAEARRLFTSTQQS HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEECCEEEEECCCHHHHHHHHHHHHH FTHMFRGTRGQLPPPIDDIETYWTPMEKVQVQGMLGRAIVGGPATVETGLKALIAETQAD HHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCHH ELMVASAIFDHSARLRSYEILSTLDIAAPVPALS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]