Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is yhbW [H]

Identifier: 158423148

GI number: 158423148

Start: 1735284

End: 1736288

Strand: Direct

Name: yhbW [H]

Synonym: AZC_1524

Alternate gene names: 158423148

Gene position: 1735284-1736288 (Clockwise)

Preceding gene: 158423146

Following gene: 158423149

Centisome position: 32.32

GC content: 67.86

Gene sequence:

>1005_bases
ATGACCAAGCTTTCCATTCTTGATCTTGCCCCCATTCCACAGGGCGCGACCGCTCGCGATGCGCTCCAGCGCAGCCTCGA
TCTTGCCCAGCATGCGGAAGGGTGGGGCTACAATCGCTTCTGGGTGGCCGAGCACCACAATATGGTGGGCATCGCCAGCG
CCGCGACCTCGGTCGTCATCGGCTATCTGGCCGACGGCACGCGGAAGATTCGCGTGGGTGCTGGCGGCATCATGCTGCCC
AATCATTCCCCACTGGTGATCGCCGAGCAGTTCGGCACGCTGGAGGCCCTCTATCCCGGTCGCATCGACCTCGGCCTCGG
TCGCGCGCCGGGCACCGACCAATGGACGATGCGCGCGTTGCGCCGCGATCCGCGCGCCGCCGACACCTTCCCGCAGGATG
TGCTGGAGCTTCAGGCCCTGCTCGGTCCGGCTCAGCCGGACCAGCGGCTGCGGGCGGTGCCCGGTACGGGTGCCGAGGTG
CCGCTCTGGATTCTCGGCTCCAGCCTCTTCGGTGCGCAGCTCGCCGGCATGCTGGGCCTGCCCTATGCCTTCGCCTCGCA
TTTCGCGCCGGAGCTTCTGATCCAGGCGCTGGACACCTATCGCGCCCGGTTCGAGCCTTCGCGCCAGTTGCAGAAGCCCC
ATGCGATGGTGGGCGTGCCGGTGGTGGTGGCGGAGACGGATGCCGAGGCGCGGCGCCTCTTCACCTCCACCCAGCAGAGC
TTCACCCACATGTTCCGCGGCACGCGCGGCCAGCTGCCCCCGCCCATCGACGATATCGAGACCTACTGGACGCCGATGGA
GAAGGTGCAGGTGCAGGGCATGCTCGGGCGGGCCATCGTCGGCGGGCCGGCGACCGTGGAAACCGGACTGAAGGCCCTCA
TCGCCGAGACGCAGGCGGACGAACTGATGGTGGCTTCCGCCATCTTCGACCATTCCGCCCGTCTGCGGTCCTACGAAATC
CTGAGCACCCTCGATATCGCGGCGCCGGTGCCGGCCTTGTCCTGA

Upstream 100 bases:

>100_bases
TGCAGGTTCGCGTGATTTTCGCAATTGCTTCGTCGCCCTTGCAAAACAGCGCCCGTGATCTGATCTGAAAGGAAAGCGGG
GGCTGGCGCGGGACCTTTCA

Downstream 100 bases:

>100_bases
GCGCTGCGTCCAGCCGCAAATCGTGCGTGCGTACAAGGCTGCGCGCGCGACGCATGCTAGGATGGACCATGACTGGGAAA
CGCGCCGCTGCGCCGCAGTG

Product: flavin dependant oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MTKLSILDLAPIPQGATARDALQRSLDLAQHAEGWGYNRFWVAEHHNMVGIASAATSVVIGYLADGTRKIRVGAGGIMLP
NHSPLVIAEQFGTLEALYPGRIDLGLGRAPGTDQWTMRALRRDPRAADTFPQDVLELQALLGPAQPDQRLRAVPGTGAEV
PLWILGSSLFGAQLAGMLGLPYAFASHFAPELLIQALDTYRARFEPSRQLQKPHAMVGVPVVVAETDAEARRLFTSTQQS
FTHMFRGTRGQLPPPIDDIETYWTPMEKVQVQGMLGRAIVGGPATVETGLKALIAETQADELMVASAIFDHSARLRSYEI
LSTLDIAAPVPALS

Sequences:

>Translated_334_residues
MTKLSILDLAPIPQGATARDALQRSLDLAQHAEGWGYNRFWVAEHHNMVGIASAATSVVIGYLADGTRKIRVGAGGIMLP
NHSPLVIAEQFGTLEALYPGRIDLGLGRAPGTDQWTMRALRRDPRAADTFPQDVLELQALLGPAQPDQRLRAVPGTGAEV
PLWILGSSLFGAQLAGMLGLPYAFASHFAPELLIQALDTYRARFEPSRQLQKPHAMVGVPVVVAETDAEARRLFTSTQQS
FTHMFRGTRGQLPPPIDDIETYWTPMEKVQVQGMLGRAIVGGPATVETGLKALIAETQADELMVASAIFDHSARLRSYEI
LSTLDIAAPVPALS
>Mature_333_residues
TKLSILDLAPIPQGATARDALQRSLDLAQHAEGWGYNRFWVAEHHNMVGIASAATSVVIGYLADGTRKIRVGAGGIMLPN
HSPLVIAEQFGTLEALYPGRIDLGLGRAPGTDQWTMRALRRDPRAADTFPQDVLELQALLGPAQPDQRLRAVPGTGAEVP
LWILGSSLFGAQLAGMLGLPYAFASHFAPELLIQALDTYRARFEPSRQLQKPHAMVGVPVVVAETDAEARRLFTSTQQSF
THMFRGTRGQLPPPIDDIETYWTPMEKVQVQGMLGRAIVGGPATVETGLKALIAETQADELMVASAIFDHSARLRSYEIL
STLDIAAPVPALS

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=318, Percent_Identity=57.8616352201258, Blast_Score=384, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 36101; Mature: 35970

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLSILDLAPIPQGATARDALQRSLDLAQHAEGWGYNRFWVAEHHNMVGIASAATSVVI
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHH
GYLADGTRKIRVGAGGIMLPNHSPLVIAEQFGTLEALYPGRIDLGLGRAPGTDQWTMRAL
HEECCCCEEEEECCCEEECCCCCCEEEEECCCCEEEECCCCEEECCCCCCCCHHHHHHHH
RRDPRAADTFPQDVLELQALLGPAQPDQRLRAVPGTGAEVPLWILGSSLFGAQLAGMLGL
HCCCCCCCCCHHHHHHHHHHHCCCCCCHHHEECCCCCCCCEEEEECCHHHHHHHHHHHCC
PYAFASHFAPELLIQALDTYRARFEPSRQLQKPHAMVGVPVVVAETDAEARRLFTSTQQS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEECCEEEEECCCHHHHHHHHHHHHH
FTHMFRGTRGQLPPPIDDIETYWTPMEKVQVQGMLGRAIVGGPATVETGLKALIAETQAD
HHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCHH
ELMVASAIFDHSARLRSYEILSTLDIAAPVPALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKLSILDLAPIPQGATARDALQRSLDLAQHAEGWGYNRFWVAEHHNMVGIASAATSVVI
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHH
GYLADGTRKIRVGAGGIMLPNHSPLVIAEQFGTLEALYPGRIDLGLGRAPGTDQWTMRAL
HEECCCCEEEEECCCEEECCCCCCEEEEECCCCEEEECCCCEEECCCCCCCCHHHHHHHH
RRDPRAADTFPQDVLELQALLGPAQPDQRLRAVPGTGAEVPLWILGSSLFGAQLAGMLGL
HCCCCCCCCCHHHHHHHHHHHCCCCCCHHHEECCCCCCCCEEEEECCHHHHHHHHHHHCC
PYAFASHFAPELLIQALDTYRARFEPSRQLQKPHAMVGVPVVVAETDAEARRLFTSTQQS
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEECCEEEEECCCHHHHHHHHHHHHH
FTHMFRGTRGQLPPPIDDIETYWTPMEKVQVQGMLGRAIVGGPATVETGLKALIAETQAD
HHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCHH
ELMVASAIFDHSARLRSYEILSTLDIAAPVPALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]