| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is fecR [H]
Identifier: 158422956
GI number: 158422956
Start: 1494526
End: 1495482
Strand: Direct
Name: fecR [H]
Synonym: AZC_1332
Alternate gene names: 158422956
Gene position: 1494526-1495482 (Clockwise)
Preceding gene: 158422955
Following gene: 158422957
Centisome position: 27.83
GC content: 68.86
Gene sequence:
>957_bases ATGAGCGAAGCACCGGAAGAGCGCCTGCTGTTTCGGGAAGCCGCCGATCTGGCCATCCGCCTGCAGAATGACCCCGCCAA CCCGGTCGCGCTCGACATGGTTCGCGCCTGGTCCGCCCGCAGCCCCAGGCATGCCGCGGCCTGGGCGCGCGTCGCGCAGA TCCACGGCATGACCGGCAAGATCCTCGGCGACCAGCGGAAGACCGCCGATGGCCACGGCGGGCTGACACGGCGCATGGTG ATCCTGGGTGGCATGATCGGCCTCGGTGCTGCGGCCGCGGGCACATGGCTGGGTCCGCAGGCCATCCGGCATGCCCGTGC GGACGCATCGACCTCTACGGCCGAAATCCGGCGGGTGGTGCTCGCCGATGGCAGCGTGATCACCCTCGGCCCGGACAGCA CGGTGGCCGTCCATTTCTCGGAAGCCCGGCGGGAGATCGTACTCCTCGATGGAATGGCCTTCTTCGAGGTCGCGCGAGAC CCGGCACGGCCTTTCACCGTCCTGTCGGGATCGGTGTCCGTGACGGCGATCGGCACGGCGTTCGATGTGTCCAGCGACGG GGGGTACATCTCCGTGTCCGTCGACCATGGGATCGTGGAGGTCCACGCGCCGAATGCGTCGCTCAGCCCCGGCGAGCGCC TGAATGTCGGCGATTGGATCACACTCGATCCGTCCTTGCACAAGGTGGCCCGCGGCGTGCGCGAGGCGTCCCAGATCGCC GCCTGGCGCGAGGGCATGCTCATCGCCGAGCAGGAGACCGTCTCGGCGATGGTCGCCAAGATCGCCCGCTGGCAGGCCGG TCCCGTCATGCTCGCGGACCCCTTCCTTGGATCGCGCGTCGTGAGTGGGGTGTTCGACCTGAGCAACCCCCTCCGCGCCA TTGAGGCGGTGGTCCGTCCGTTCGGCGCCAAGGTGCGCCAGCTGGGGTCGTTTGCGACGGTGATTTCTCCCGTCTGA
Upstream 100 bases:
>100_bases CCGGCATCACGGCCGCTGAACAGTCGCGCGTGCCGTTCGTATGGTGATAGGAAGCTCCCGATCCTGCCGCGTCGGCAGCC CGCCCGCACGAGGAATGCCC
Downstream 100 bases:
>100_bases CAAAAAGGCGACGAGAACGCAGGAGATTCCGGAGCCCCGTTCGTAAGCCCTAATAGGGGCTCAAGCGACCAGCGATGTGC AGACGCCAGCCCTCCTGTGA
Product: FecR protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSEAPEERLLFREAADLAIRLQNDPANPVALDMVRAWSARSPRHAAAWARVAQIHGMTGKILGDQRKTADGHGGLTRRMV ILGGMIGLGAAAAGTWLGPQAIRHARADASTSTAEIRRVVLADGSVITLGPDSTVAVHFSEARREIVLLDGMAFFEVARD PARPFTVLSGSVSVTAIGTAFDVSSDGGYISVSVDHGIVEVHAPNASLSPGERLNVGDWITLDPSLHKVARGVREASQIA AWREGMLIAEQETVSAMVAKIARWQAGPVMLADPFLGSRVVSGVFDLSNPLRAIEAVVRPFGAKVRQLGSFATVISPV
Sequences:
>Translated_318_residues MSEAPEERLLFREAADLAIRLQNDPANPVALDMVRAWSARSPRHAAAWARVAQIHGMTGKILGDQRKTADGHGGLTRRMV ILGGMIGLGAAAAGTWLGPQAIRHARADASTSTAEIRRVVLADGSVITLGPDSTVAVHFSEARREIVLLDGMAFFEVARD PARPFTVLSGSVSVTAIGTAFDVSSDGGYISVSVDHGIVEVHAPNASLSPGERLNVGDWITLDPSLHKVARGVREASQIA AWREGMLIAEQETVSAMVAKIARWQAGPVMLADPFLGSRVVSGVFDLSNPLRAIEAVVRPFGAKVRQLGSFATVISPV >Mature_317_residues SEAPEERLLFREAADLAIRLQNDPANPVALDMVRAWSARSPRHAAAWARVAQIHGMTGKILGDQRKTADGHGGLTRRMVI LGGMIGLGAAAAGTWLGPQAIRHARADASTSTAEIRRVVLADGSVITLGPDSTVAVHFSEARREIVLLDGMAFFEVARDP ARPFTVLSGSVSVTAIGTAFDVSSDGGYISVSVDHGIVEVHAPNASLSPGERLNVGDWITLDPSLHKVARGVREASQIAA WREGMLIAEQETVSAMVAKIARWQAGPVMLADPFLGSRVVSGVFDLSNPLRAIEAVVRPFGAKVRQLGSFATVISPV
Specific function: Regulation of iron dicitrate transport. In the absence of citrate fecR inactivates fecI. FecR is probably a sensor that recognizes iron dicitrate in the periplasm [H]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790745, Length=287, Percent_Identity=25.7839721254355, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006860 - InterPro: IPR012373 [H]
Pfam domain/function: PF04773 FecR [H]
EC number: NA
Molecular weight: Translated: 33674; Mature: 33543
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAPEERLLFREAADLAIRLQNDPANPVALDMVRAWSARSPRHAAAWARVAQIHGMTGK CCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCE ILGDQRKTADGHGGLTRRMVILGGMIGLGAAAAGTWLGPQAIRHARADASTSTAEIRRVV EECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHCCCCCCHHHHEEEE LADGSVITLGPDSTVAVHFSEARREIVLLDGMAFFEVARDPARPFTVLSGSVSVTAIGTA EECCCEEEECCCCEEEEEEHHCCCEEEEECCHHHHHHHCCCCCCEEEEECCEEEEEEEEE FDVSSDGGYISVSVDHGIVEVHAPNASLSPGERLNVGDWITLDPSLHKVARGVREASQIA EEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH AWREGMLIAEQETVSAMVAKIARWQAGPVMLADPFLGSRVVSGVFDLSNPLRAIEAVVRP HHHCCEEEEHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHH FGAKVRQLGSFATVISPV HHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEAPEERLLFREAADLAIRLQNDPANPVALDMVRAWSARSPRHAAAWARVAQIHGMTGK CCCCHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCE ILGDQRKTADGHGGLTRRMVILGGMIGLGAAAAGTWLGPQAIRHARADASTSTAEIRRVV EECCCCCCCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHCCCCCCHHHHEEEE LADGSVITLGPDSTVAVHFSEARREIVLLDGMAFFEVARDPARPFTVLSGSVSVTAIGTA EECCCEEEECCCCEEEEEEHHCCCEEEEECCHHHHHHHCCCCCCEEEEECCEEEEEEEEE FDVSSDGGYISVSVDHGIVEVHAPNASLSPGERLNVGDWITLDPSLHKVARGVREASQIA EEECCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHH AWREGMLIAEQETVSAMVAKIARWQAGPVMLADPFLGSRVVSGVFDLSNPLRAIEAVVRP HHHCCEEEEHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHH FGAKVRQLGSFATVISPV HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254251; 7610040; 9278503 [H]