| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is fcuA [H]
Identifier: 158422957
GI number: 158422957
Start: 1495598
End: 1498078
Strand: Direct
Name: fcuA [H]
Synonym: AZC_1333
Alternate gene names: 158422957
Gene position: 1495598-1498078 (Clockwise)
Preceding gene: 158422956
Following gene: 158422960
Centisome position: 27.85
GC content: 62.8
Gene sequence:
>2481_bases TTGGACATGCAGCCGGGGTCTGGGACAAGGGGTTTCGCCAGCGTTGGCCGGAAGGTGATGATCGCCACGCTGCTCGCGAC CACCGCGCTTCTGGTGGAGGGAGCGCGCAGCGGAAGCGGTGCCCGCGCGCAGGCCGGTGTCCAAACCACCTTCAACATTC CCGCCGGCCCATTGAGCCGAGCCCTTGCGGCCTTCGGGCGGCAATCGGGCACGCAGGTTTCCTACGAAGCCGCGATCGCG AACGGCAAGACCTCGCCCGGGTTCCAGGGAACCGCGACGCGCGAGCAGGTGATCGCACAGCTTCTCCAAGGGTCGGGGCT CGTCTACTCCTTTTCCGACGCGACGAACGTCCTGATCACCCGGCCGCGCCCCGTCAGCGCGACCACGGCGAGCGATGGCT CGCTTCTCCTCGATACGATCAATGTGGAAGGGCAGGGGATCAACGATTGGGATGCCCCGCCGTCCTATGCCGGGGGGCAG GTCGCAACGGGCGCGCGGCTCGGAATCCTCGGAAATGTCAGCATCATGGACGCGCCCTTCAGCGTCACCAGCTACACGTC CAAGCTGATCCAGGAGCAGCAGGCCGTGACGGTGGCCGACGTGGTGGCGAATGATCCGTCCGTGCGGGTCTTCACCAACG GCATCAGTTCCTCCGCCGGCGCGGGTGAAGTCTTCTTCATCCGCGGCTTCAGCGTCACCAACCAGAGCATCCTGATTGAC GGCTACGGTGGGATTTCTCCCGATCGCCTCATCCCGGTGGAAACCATGGAGCGTGTGGAGGTGCTGAAGGGCCCGAACGC GCTTCTGACGGGCTACACCCAATATGGTTCCCTTGGCGGGTCGATCAATGTGGTTCCCAAGCGCGCAACGGACGAGCCGA TCACGCGCTTGACCGGCAGCTATATTTCCGATGGCCAGCTCGGCACCCAGATCGATTGGGGAAGGCGTTTCGGTCCCAAC AAGGAATGGGGCGTGCGGGTCAACGGCATCTTCACGGACGGGGACACGTCCGTGGACGGCCAGTCCGCCCGCCTCGGGAC CGGCACCCTTGCGCTGGACTACCGCGGAGCGGACCTGCGTGCGAGCCTTGATGCCGGATATATCAGCCAGAAGACCTATG CTCCGACCGGCGCGGCCGGCTTCGGCTTTGTCTCGGACATCGCCATCCCGCGCGCGCCGGACGCCAGCAAGCAGATCTAC CAAAGCTGGGAGTATTCCGGCACGAACACCGCCTATGCGCTCGGCAAGTTCGAGTATGACATCAACTCAGCTTGGACGGT CTATGGCGGGATCGGCGGCAGCACCTACAGGCAATCGATGCTGTCCACGGACATCCTTGTGGTCGATCCGGCGGGGAATG CAACGGCCACGGCCTATTACAGCCCCATCAACGGCAATTCGACCTCCGCTCAGGCGGGCATTCGCGGGGAGTTCGCGACC GGCCCCATCGGACACAAGATCAATCTCAACACCTCATACCTGTACCAGTCCCTGAATCAGGAAAGCAACTATTACGGCTT CTACGCCTTCGACACGAATATCTACAACGCCCCGACCGTCGCTCGCCCCTCGACCTTCGGATTCAGCGACGACCCGCCGA GATACTGGAATATTAACGCACCTGCCGTCACCCTGACGGACACGCTCTCGATCCTTGACGAGCGCGTCCTCTTTACTGCC GGGGTACGCTATCAGCAGATCAAGGTGGATGTGTTCAATCCCGATGGAAGCATCTCGCAGGCCTATGATGAACAGGCGGT CACTCCCGCCTTCGGCCTCGTGCTGAAGCCCTTCGACCGGATGTCGCTGTACGCCAACTACATCCAGGGCCTCCAGCAGG GACCGATCGCCTATCAGGGCACGGTGAATGCCGGCGAGGTGTTCCCGCCGATGATGACGGAGCAGGTGGAGGCCGGCATC AAGTATGATTTCGGCGCCTTCACCGCCACCGCCAGCATTTTCCAGATCACCAAGCCCAGCAGCATCATCTCGACCAATGC AGCGGGCGAGTCCGTCTTCAGCGTCAATGGCGAACAACGCAACCGGGGCGTGGAGGTCAACGTCTTCGGCGAGCTTTCGA GGGGGCTGCGTCTCCTCGGCGGCGTCGCCTACACGCAAGGCACGCTGACCCAGACCGCGGACCGGCTCTATGACGGCAAC GCCGCGGTCGGCGTACCCAACTGGCAGACCAATATCGGCATCGAATGGGATCCGGAACCGGTTGCCGGCCTCACCTTATG GGGCCGGATGCTGGCCACCAGTTCCCAATATGTGAACCAGGCGAACACCCAGCAGATCCCGAGCTGGATCCGCTTCGATC TCGGGACGCAGTACAAGACGCACGCATTCGGTAATCCACTCGCCTTGCGTTTCGCGGTGGAGAACGTCTTCGACAAGAGC TACTGGGCGGCCGTGAACGATGGGTGGGTCTCGACCGGGCTTCCGAGAACCTTCAAGTTCTCGGCCGTGATGGACTTCTG A
Upstream 100 bases:
>100_bases AACGCAGGAGATTCCGGAGCCCCGTTCGTAAGCCCTAATAGGGGCTCAAGCGACCAGCGATGTGCAGACGCCAGCCCTCC TGTGAAAGCGACGGAGAGGC
Downstream 100 bases:
>100_bases GGCTGGAGCCGGCCATGCGCCCCGGCGGCGCATGGCTTGGCCGCGAGGACGGCATGGACGCCCCAAGCTCATCCATGCCG ATCGGGCGGCGACGACGCCC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 826; Mature: 826
Protein sequence:
>826_residues MDMQPGSGTRGFASVGRKVMIATLLATTALLVEGARSGSGARAQAGVQTTFNIPAGPLSRALAAFGRQSGTQVSYEAAIA NGKTSPGFQGTATREQVIAQLLQGSGLVYSFSDATNVLITRPRPVSATTASDGSLLLDTINVEGQGINDWDAPPSYAGGQ VATGARLGILGNVSIMDAPFSVTSYTSKLIQEQQAVTVADVVANDPSVRVFTNGISSSAGAGEVFFIRGFSVTNQSILID GYGGISPDRLIPVETMERVEVLKGPNALLTGYTQYGSLGGSINVVPKRATDEPITRLTGSYISDGQLGTQIDWGRRFGPN KEWGVRVNGIFTDGDTSVDGQSARLGTGTLALDYRGADLRASLDAGYISQKTYAPTGAAGFGFVSDIAIPRAPDASKQIY QSWEYSGTNTAYALGKFEYDINSAWTVYGGIGGSTYRQSMLSTDILVVDPAGNATATAYYSPINGNSTSAQAGIRGEFAT GPIGHKINLNTSYLYQSLNQESNYYGFYAFDTNIYNAPTVARPSTFGFSDDPPRYWNINAPAVTLTDTLSILDERVLFTA GVRYQQIKVDVFNPDGSISQAYDEQAVTPAFGLVLKPFDRMSLYANYIQGLQQGPIAYQGTVNAGEVFPPMMTEQVEAGI KYDFGAFTATASIFQITKPSSIISTNAAGESVFSVNGEQRNRGVEVNVFGELSRGLRLLGGVAYTQGTLTQTADRLYDGN AAVGVPNWQTNIGIEWDPEPVAGLTLWGRMLATSSQYVNQANTQQIPSWIRFDLGTQYKTHAFGNPLALRFAVENVFDKS YWAAVNDGWVSTGLPRTFKFSAVMDF
Sequences:
>Translated_826_residues MDMQPGSGTRGFASVGRKVMIATLLATTALLVEGARSGSGARAQAGVQTTFNIPAGPLSRALAAFGRQSGTQVSYEAAIA NGKTSPGFQGTATREQVIAQLLQGSGLVYSFSDATNVLITRPRPVSATTASDGSLLLDTINVEGQGINDWDAPPSYAGGQ VATGARLGILGNVSIMDAPFSVTSYTSKLIQEQQAVTVADVVANDPSVRVFTNGISSSAGAGEVFFIRGFSVTNQSILID GYGGISPDRLIPVETMERVEVLKGPNALLTGYTQYGSLGGSINVVPKRATDEPITRLTGSYISDGQLGTQIDWGRRFGPN KEWGVRVNGIFTDGDTSVDGQSARLGTGTLALDYRGADLRASLDAGYISQKTYAPTGAAGFGFVSDIAIPRAPDASKQIY QSWEYSGTNTAYALGKFEYDINSAWTVYGGIGGSTYRQSMLSTDILVVDPAGNATATAYYSPINGNSTSAQAGIRGEFAT GPIGHKINLNTSYLYQSLNQESNYYGFYAFDTNIYNAPTVARPSTFGFSDDPPRYWNINAPAVTLTDTLSILDERVLFTA GVRYQQIKVDVFNPDGSISQAYDEQAVTPAFGLVLKPFDRMSLYANYIQGLQQGPIAYQGTVNAGEVFPPMMTEQVEAGI KYDFGAFTATASIFQITKPSSIISTNAAGESVFSVNGEQRNRGVEVNVFGELSRGLRLLGGVAYTQGTLTQTADRLYDGN AAVGVPNWQTNIGIEWDPEPVAGLTLWGRMLATSSQYVNQANTQQIPSWIRFDLGTQYKTHAFGNPLALRFAVENVFDKS YWAAVNDGWVSTGLPRTFKFSAVMDF >Mature_826_residues MDMQPGSGTRGFASVGRKVMIATLLATTALLVEGARSGSGARAQAGVQTTFNIPAGPLSRALAAFGRQSGTQVSYEAAIA NGKTSPGFQGTATREQVIAQLLQGSGLVYSFSDATNVLITRPRPVSATTASDGSLLLDTINVEGQGINDWDAPPSYAGGQ VATGARLGILGNVSIMDAPFSVTSYTSKLIQEQQAVTVADVVANDPSVRVFTNGISSSAGAGEVFFIRGFSVTNQSILID GYGGISPDRLIPVETMERVEVLKGPNALLTGYTQYGSLGGSINVVPKRATDEPITRLTGSYISDGQLGTQIDWGRRFGPN KEWGVRVNGIFTDGDTSVDGQSARLGTGTLALDYRGADLRASLDAGYISQKTYAPTGAAGFGFVSDIAIPRAPDASKQIY QSWEYSGTNTAYALGKFEYDINSAWTVYGGIGGSTYRQSMLSTDILVVDPAGNATATAYYSPINGNSTSAQAGIRGEFAT GPIGHKINLNTSYLYQSLNQESNYYGFYAFDTNIYNAPTVARPSTFGFSDDPPRYWNINAPAVTLTDTLSILDERVLFTA GVRYQQIKVDVFNPDGSISQAYDEQAVTPAFGLVLKPFDRMSLYANYIQGLQQGPIAYQGTVNAGEVFPPMMTEQVEAGI KYDFGAFTATASIFQITKPSSIISTNAAGESVFSVNGEQRNRGVEVNVFGELSRGLRLLGGVAYTQGTLTQTADRLYDGN AAVGVPNWQTNIGIEWDPEPVAGLTLWGRMLATSSQYVNQANTQQIPSWIRFDLGTQYKTHAFGNPLALRFAVENVFDKS YWAAVNDGWVSTGLPRTFKFSAVMDF
Specific function: Receptor for the hydroxamate siderophore, ferrichrome. Binds also to most other ferrichrome derivatives except enantio ferrichrome and ferric rhodotorulate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=263, Percent_Identity=26.9961977186312, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1787024, Length=737, Percent_Identity=22.5237449118046, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 88121; Mature: 88121
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMQPGSGTRGFASVGRKVMIATLLATTALLVEGARSGSGARAQAGVQTTFNIPAGPLSR CCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHH ALAAFGRQSGTQVSYEAAIANGKTSPGFQGTATREQVIAQLLQGSGLVYSFSDATNVLIT HHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEE RPRPVSATTASDGSLLLDTINVEGQGINDWDAPPSYAGGQVATGARLGILGNVSIMDAPF CCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEECCEEEEEEECCEEECCCC SVTSYTSKLIQEQQAVTVADVVANDPSVRVFTNGISSSAGAGEVFFIRGFSVTNQSILID CHHHHHHHHHHHHHHEEEEHHHCCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCEEEEE GYGGISPDRLIPVETMERVEVLKGPNALLTGYTQYGSLGGSINVVPKRATDEPITRLTGS CCCCCCCCCEECHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEEEEECCCCCCHHHHHCCC YISDGQLGTQIDWGRRFGPNKEWGVRVNGIFTDGDTSVDGQSARLGTGTLALDYRGADLR CCCCCCCCCEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCEEEEEECCCCEE ASLDAGYISQKTYAPTGAAGFGFVSDIAIPRAPDASKQIYQSWEYSGTNTAYALGKFEYD EECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEE INSAWTVYGGIGGSTYRQSMLSTDILVVDPAGNATATAYYSPINGNSTSAQAGIRGEFAT CCCEEEEEECCCCHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC GPIGHKINLNTSYLYQSLNQESNYYGFYAFDTNIYNAPTVARPSTFGFSDDPPRYWNINA CCCCCEEECCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCC PAVTLTDTLSILDERVLFTAGVRYQQIKVDVFNPDGSISQAYDEQAVTPAFGLVLKPFDR CEEEEHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHCCCCHHHHHHCCCHHH MSLYANYIQGLQQGPIAYQGTVNAGEVFPPMMTEQVEAGIKYDFGAFTATASIFQITKPS HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHCCCEECCCHHHHEEEEEEECCCC SIISTNAAGESVFSVNGEQRNRGVEVNVFGELSRGLRLLGGVAYTQGTLTQTADRLYDGN CEEECCCCCCEEEEECCCHHCCCEEEEEHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCC AAVGVPNWQTNIGIEWDPEPVAGLTLWGRMLATSSQYVNQANTQQIPSWIRFDLGTQYKT EEEECCCCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHHCCCHHHCCHHEEECCCCCEEE HAFGNPLALRFAVENVFDKSYWAAVNDGWVSTGLPRTFKFSAVMDF CCCCCCEEEEEEHHHHHCCHHEEEECCCEECCCCCCEEEEEEEECC >Mature Secondary Structure MDMQPGSGTRGFASVGRKVMIATLLATTALLVEGARSGSGARAQAGVQTTFNIPAGPLSR CCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHH ALAAFGRQSGTQVSYEAAIANGKTSPGFQGTATREQVIAQLLQGSGLVYSFSDATNVLIT HHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEE RPRPVSATTASDGSLLLDTINVEGQGINDWDAPPSYAGGQVATGARLGILGNVSIMDAPF CCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEECCEEEEEEECCEEECCCC SVTSYTSKLIQEQQAVTVADVVANDPSVRVFTNGISSSAGAGEVFFIRGFSVTNQSILID CHHHHHHHHHHHHHHEEEEHHHCCCCCEEEEECCCCCCCCCCEEEEEEEEEECCCEEEEE GYGGISPDRLIPVETMERVEVLKGPNALLTGYTQYGSLGGSINVVPKRATDEPITRLTGS CCCCCCCCCEECHHHHHHHHHHCCCCCEEEEEHHHCCCCCEEEEEECCCCCCHHHHHCCC YISDGQLGTQIDWGRRFGPNKEWGVRVNGIFTDGDTSVDGQSARLGTGTLALDYRGADLR CCCCCCCCCEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCEEEEEECCCCEE ASLDAGYISQKTYAPTGAAGFGFVSDIAIPRAPDASKQIYQSWEYSGTNTAYALGKFEYD EECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEE INSAWTVYGGIGGSTYRQSMLSTDILVVDPAGNATATAYYSPINGNSTSAQAGIRGEFAT CCCEEEEEECCCCHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC GPIGHKINLNTSYLYQSLNQESNYYGFYAFDTNIYNAPTVARPSTFGFSDDPPRYWNINA CCCCCEEECCHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCC PAVTLTDTLSILDERVLFTAGVRYQQIKVDVFNPDGSISQAYDEQAVTPAFGLVLKPFDR CEEEEHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHCCCCHHHHHHCCCHHH MSLYANYIQGLQQGPIAYQGTVNAGEVFPPMMTEQVEAGIKYDFGAFTATASIFQITKPS HHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHCCCEECCCHHHHEEEEEEECCCC SIISTNAAGESVFSVNGEQRNRGVEVNVFGELSRGLRLLGGVAYTQGTLTQTADRLYDGN CEEECCCCCCEEEEECCCHHCCCEEEEEHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCC AAVGVPNWQTNIGIEWDPEPVAGLTLWGRMLATSSQYVNQANTQQIPSWIRFDLGTQYKT EEEECCCCCCCCCEEECCCCCCHHHHHHHHHHCCHHHHHCCCHHHCCHHEEECCCCCEEE HAFGNPLALRFAVENVFDKSYWAAVNDGWVSTGLPRTFKFSAVMDF CCCCCCEEEEEEHHHHHCCHHEEEECCCEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8384682 [H]