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The map label for this gene is fecI [H]

Identifier: 158422955

GI number: 158422955

Start: 1493813

End: 1494421

Strand: Direct

Name: fecI [H]

Synonym: AZC_1331

Alternate gene names: 158422955

Gene position: 1493813-1494421 (Clockwise)

Preceding gene: 158422954

Following gene: 158422956

Centisome position: 27.82

GC content: 66.83

Gene sequence:

>609_bases
GTGTTGTCGGACGCTTTCGTGTCACGTCCGCCAGCGCTGCAATCGCCGACAAGGGCCGGTTCCGCCTTGGCGGACGGCGC
TGGCGCGGCCGGAGGGTGGTGTTCAGTGGGCTGGGATCTTGCCGCATTGTTCAAGCAGCATGCGAAGGATATCGCGCAGG
CGCTGCGCAGGCGCGGCCTGACGGCGGACATGGCCGCCGACCTCACCCAGGACACGTTCGTCCGGGTTCTTGTGTCGCCG
CCAGCCGAAAGCGCCCCCGTGAACAATCCTGCCGCTTATCTCTTCCGGGTGGCCCGCAATCTTTCCATCGACCATCTGCG
GCGGGAGCGGCTGCTGAACCGCGTGGATCTTTGCCCCGATGGCTTCGCGGCAATCCTCGATCCATCGCCCTCGCAGGAGG
TCGTCGTCTACGACCGGCAGAAGCTTGCCCTGACCGCTGCTGCCCTGGCCGAGCTGCCGGAAAAGACACGGCGGGCCTTC
GAGCTGCACCGGATGGAGGAGATGACCGTCGCGGAGGTGGCGGCAGAGCTCGGCCTCTCCCGGTCGCGGGTTTGGGCGCT
TGTGCGGGATGCTTACGAGCATATCGACCTGCGGCTGAGCGGCCTCTGA

Upstream 100 bases:

>100_bases
GACTTGCCTGGTGAGCTCCGCCGCAGAAAGAAGTTGCTGCTTAGAATCTGTATAAATCATTGTTCTTGCGTAAGAATTTT
GATTTGGGCTAAGCCCCTCC

Downstream 100 bases:

>100_bases
GCGGCCGGCATCACGGCCGCTGAACAGTCGCGCGTGCCGTTCGTATGGTGATAGGAAGCTCCCGATCCTGCCGCGTCGGC
AGCCCGCCCGCACGAGGAAT

Product: FecI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLSDAFVSRPPALQSPTRAGSALADGAGAAGGWCSVGWDLAALFKQHAKDIAQALRRRGLTADMAADLTQDTFVRVLVSP
PAESAPVNNPAAYLFRVARNLSIDHLRRERLLNRVDLCPDGFAAILDPSPSQEVVVYDRQKLALTAAALAELPEKTRRAF
ELHRMEEMTVAEVAAELGLSRSRVWALVRDAYEHIDLRLSGL

Sequences:

>Translated_202_residues
MLSDAFVSRPPALQSPTRAGSALADGAGAAGGWCSVGWDLAALFKQHAKDIAQALRRRGLTADMAADLTQDTFVRVLVSP
PAESAPVNNPAAYLFRVARNLSIDHLRRERLLNRVDLCPDGFAAILDPSPSQEVVVYDRQKLALTAAALAELPEKTRRAF
ELHRMEEMTVAEVAAELGLSRSRVWALVRDAYEHIDLRLSGL
>Mature_202_residues
MLSDAFVSRPPALQSPTRAGSALADGAGAAGGWCSVGWDLAALFKQHAKDIAQALRRRGLTADMAADLTQDTFVRVLVSP
PAESAPVNNPAAYLFRVARNLSIDHLRRERLLNRVDLCPDGFAAILDPSPSQEVVVYDRQKLALTAAALAELPEKTRRAF
ELHRMEEMTVAEVAAELGLSRSRVWALVRDAYEHIDLRLSGL

Specific function: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor regulates the fec genes for iron dicitrate transport (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma-70 factor family. ECF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790746, Length=157, Percent_Identity=33.1210191082803, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014284
- InterPro:   IPR000838
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 22012; Mature: 22012

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDAFVSRPPALQSPTRAGSALADGAGAAGGWCSVGWDLAALFKQHAKDIAQALRRRGL
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TADMAADLTQDTFVRVLVSPPAESAPVNNPAAYLFRVARNLSIDHLRRERLLNRVDLCPD
CHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
GFAAILDPSPSQEVVVYDRQKLALTAAALAELPEKTRRAFELHRMEEMTVAEVAAELGLS
CCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSRVWALVRDAYEHIDLRLSGL
HHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MLSDAFVSRPPALQSPTRAGSALADGAGAAGGWCSVGWDLAALFKQHAKDIAQALRRRGL
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TADMAADLTQDTFVRVLVSPPAESAPVNNPAAYLFRVARNLSIDHLRRERLLNRVDLCPD
CHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
GFAAILDPSPSQEVVVYDRQKLALTAAALAELPEKTRRAFELHRMEEMTVAEVAAELGLS
CCEEEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSRVWALVRDAYEHIDLRLSGL
HHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254251; 7610040; 9278503; 8052622 [H]