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The map label for this gene is nrdR

Identifier: 158422886

GI number: 158422886

Start: 1412901

End: 1413422

Strand: Direct

Name: nrdR

Synonym: AZC_1262

Alternate gene names: 158422886

Gene position: 1412901-1413422 (Clockwise)

Preceding gene: 158422885

Following gene: 158422887

Centisome position: 26.31

GC content: 66.86

Gene sequence:

>522_bases
ATGCGGTGCCCCTATTGCGGCAGTCTCGACACCCAGGTGAAGGACAGCCGCCCCACCGAGGACAACACCGCCATCCGCCG
CCGCCGGGTCTGCCCGGATTGCGGCGGGCGGTTCACCACCTTCGAGCGCGTGCAGTTGCGCGAACTGATGGTGGTGAAGC
GCTCGGGCCGCCGCGTGCCCTTCGATCGCGACAAGCTCGCCCGGTCCGTGGAAATCGCCCTGCGCAAGCGTCCGGTCGAG
ACCGAGCGCGTGGAGCGGATGCTCTCCGGCCTCGTGCGGCAGCTGGAGAGCCTCGGGGATACGGAGATCACCTCCGAGAC
CATCGGCGAGATGGTGATGGAGGGTCTGAAGCAGATCGACGACGTGGCTTATGTCCGCTTCGCCTCCGTCTATCGCAATT
TCCGTGAGGCGCGCGATTTCGAGAGCCTGCTGGACGAATTGCAGCTCGGCGAGCGCAAGGCGGAGGCGCTGGCCAAGCTG
AAGCGCGCGGACCGCACAGCGTCCGAAAGCGAACCGGAGTAG

Upstream 100 bases:

>100_bases
CCCGCTCCGGCGACTGCCGGGGCAGGCCCCGTTTGGCAGCGCGCGGGTCATCGGCCCGCGCGCTTTTCGTCCGATCCCGT
GCGGCAAGGGACAGGTCTTC

Downstream 100 bases:

>100_bases
GGGCCATGAGCGCTGCTGCGGTGGGCCTTGGCCGGGCCGGCGTCTTCTCGCCCGAGGAAGACGAGGCCCTGATGGCGGAG
GCGCTGGCGGTCGGCCAGCT

Product: ATP cone domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRCPYCGSLDTQVKDSRPTEDNTAIRRRRVCPDCGGRFTTFERVQLRELMVVKRSGRRVPFDRDKLARSVEIALRKRPVE
TERVERMLSGLVRQLESLGDTEITSETIGEMVMEGLKQIDDVAYVRFASVYRNFREARDFESLLDELQLGERKAEALAKL
KRADRTASESEPE

Sequences:

>Translated_173_residues
MRCPYCGSLDTQVKDSRPTEDNTAIRRRRVCPDCGGRFTTFERVQLRELMVVKRSGRRVPFDRDKLARSVEIALRKRPVE
TERVERMLSGLVRQLESLGDTEITSETIGEMVMEGLKQIDDVAYVRFASVYRNFREARDFESLLDELQLGERKAEALAKL
KRADRTASESEPE
>Mature_173_residues
MRCPYCGSLDTQVKDSRPTEDNTAIRRRRVCPDCGGRFTTFERVQLRELMVVKRSGRRVPFDRDKLARSVEIALRKRPVE
TERVERMLSGLVRQLESLGDTEITSETIGEMVMEGLKQIDDVAYVRFASVYRNFREARDFESLLDELQLGERKAEALAKL
KRADRTASESEPE

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=140, Percent_Identity=45.7142857142857, Blast_Score=127, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_AZOC5 (A8I0I5)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001524178.1
- GeneID:   5690575
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_1262
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- BioCyc:   ACAU438753:AZC_1262-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 19989; Mature: 19989

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCPYCGSLDTQVKDSRPTEDNTAIRRRRVCPDCGGRFTTFERVQLRELMVVKRSGRRVP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
FDRDKLARSVEIALRKRPVETERVERMLSGLVRQLESLGDTEITSETIGEMVMEGLKQID
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DVAYVRFASVYRNFREARDFESLLDELQLGERKAEALAKLKRADRTASESEPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRCPYCGSLDTQVKDSRPTEDNTAIRRRRVCPDCGGRFTTFERVQLRELMVVKRSGRRVP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
FDRDKLARSVEIALRKRPVETERVERMLSGLVRQLESLGDTEITSETIGEMVMEGLKQID
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
DVAYVRFASVYRNFREARDFESLLDELQLGERKAEALAKLKRADRTASESEPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA