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The map label for this gene is cycH [H]

Identifier: 158422756

GI number: 158422756

Start: 1258394

End: 1259563

Strand: Direct

Name: cycH [H]

Synonym: AZC_1132

Alternate gene names: 158422756

Gene position: 1258394-1259563 (Clockwise)

Preceding gene: 158422755

Following gene: 158422757

Centisome position: 23.43

GC content: 73.76

Gene sequence:

>1170_bases
ATGATGTCCCTTCCGCTGTTCATCGCCTTTGCGCTGATGACCGCCGCCGCGGTCATGGCCGTGCTGTGGCCCCTGAGCCG
CAGGCGCGAGGCGCACAGCGAGCGCGAGGCGGACCTTGCGGTCTATCGCGACCAGCTCGCCGAGATCGGCCGCGATCAGG
CGGCCGGACGCCTGCCGGCCGAGCAGGCCGAAGCGGCCCGCATTGAGGTCAGCCGCCGAATCCTTGCCGCCGCGGGCACC
GCAGGGGCGGCTTCGCCTGCGGAAGCGAATGGCGTGCGCCGGCGCCGGCTCGCCGCCATCTTCGTGCTCATCCTGATTCC
CGTGGTGGCCGCCGGCATCTACGGCTTCACCGGCGCGCCGACCGTGCCGGGCGCACCTCTGGCCGCGCGCCTCACTGCGC
CCCCGGATGGCAACGACATCGCCATTCTCGTGCGGCGGGTGGAGGAGCATCTCGCCGCCAACCCCAATGACGGGCAGGGC
TATGAACTGCTCGCCCCCGTCTATGCCCGCATGGGCCGGCTCGACGACGCGGCGCGCGCCTATCGGCAGGCCATCCGCCT
GCTCGGCAACAGCGCCGAGCGGCAGGTGGCGCTCGGCGAGGTGCTGACGCTGGCCGCCAACGGCATGGTCACGCAGGAGG
CCGCGCAGGCCTTCGCCGCTGCCGCGGCGCTGGACCCGCAGTCGGTGAAGGCCCGCTATTTCCTCGGCCTCGCCGCCGAG
CAGGACGGGCGCAAGGCCGATGCCGCCGCCCTCTGGTCGAGCCTGCTCCAGAGCGCGCCGGCCGATGCGCCGTGGCGCCC
GATCGTCACGGCGGCGCTGGCGCGCGTGGGTGGCAGGGCCCCGTCCACCTCCGTCCTGCGCCTGCCGCAGCCCGCGACTC
CGGCGACGGCACCGGGCCCTTCCGCCGAGGACGTGGCCGCGGCTGCCCAGCAGACGCCGGAGCAGCGTTCCGCCATGATC
ATGGGCATGGTCTCGCGGCTGGAGGAGCGGCTCGCCGCCGATCCGAAGGATCTCGACGGCTGGCTGCGGCTCGCACGGGC
CTGGAGCGTGCTCGGCGACAAGACCAAGGCGGAGGCCGCGCTGCAATCTGCGCGCAAGGCCTTCGCCGATGATGCGGAGG
CGGGCCGTCGCCTCGATGCGGCGCGGCAGGAACTGGGGCTCGGGGGTTAG

Upstream 100 bases:

>100_bases
GGCGGCTATCTAATGACGCTTGCGTGAGACGCCGTCGCTGCGAAGGCCCGCGACGGAAAGCAGCGTTGCATTTCCGTCCT
GCTCCGATACGGCAGTTGTC

Downstream 100 bases:

>100_bases
GCTGCAACCAGCCGATGCAGGTCAAGGATCGGGCTGGAGAACTGCTGTATGAGGGCTGGAGCTTGGAGACGTTAAGACCG
TGACCCGTAAAAGCCGCCGC

Product: cytochrome c-type biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MMSLPLFIAFALMTAAAVMAVLWPLSRRREAHSEREADLAVYRDQLAEIGRDQAAGRLPAEQAEAARIEVSRRILAAAGT
AGAASPAEANGVRRRRLAAIFVLILIPVVAAGIYGFTGAPTVPGAPLAARLTAPPDGNDIAILVRRVEEHLAANPNDGQG
YELLAPVYARMGRLDDAARAYRQAIRLLGNSAERQVALGEVLTLAANGMVTQEAAQAFAAAAALDPQSVKARYFLGLAAE
QDGRKADAAALWSSLLQSAPADAPWRPIVTAALARVGGRAPSTSVLRLPQPATPATAPGPSAEDVAAAAQQTPEQRSAMI
MGMVSRLEERLAADPKDLDGWLRLARAWSVLGDKTKAEAALQSARKAFADDAEAGRRLDAARQELGLGG

Sequences:

>Translated_389_residues
MMSLPLFIAFALMTAAAVMAVLWPLSRRREAHSEREADLAVYRDQLAEIGRDQAAGRLPAEQAEAARIEVSRRILAAAGT
AGAASPAEANGVRRRRLAAIFVLILIPVVAAGIYGFTGAPTVPGAPLAARLTAPPDGNDIAILVRRVEEHLAANPNDGQG
YELLAPVYARMGRLDDAARAYRQAIRLLGNSAERQVALGEVLTLAANGMVTQEAAQAFAAAAALDPQSVKARYFLGLAAE
QDGRKADAAALWSSLLQSAPADAPWRPIVTAALARVGGRAPSTSVLRLPQPATPATAPGPSAEDVAAAAQQTPEQRSAMI
MGMVSRLEERLAADPKDLDGWLRLARAWSVLGDKTKAEAALQSARKAFADDAEAGRRLDAARQELGLGG
>Mature_389_residues
MMSLPLFIAFALMTAAAVMAVLWPLSRRREAHSEREADLAVYRDQLAEIGRDQAAGRLPAEQAEAARIEVSRRILAAAGT
AGAASPAEANGVRRRRLAAIFVLILIPVVAAGIYGFTGAPTVPGAPLAARLTAPPDGNDIAILVRRVEEHLAANPNDGQG
YELLAPVYARMGRLDDAARAYRQAIRLLGNSAERQVALGEVLTLAANGMVTQEAAQAFAAAAALDPQSVKARYFLGLAAE
QDGRKADAAALWSSLLQSAPADAPWRPIVTAALARVGGRAPSTSVLRLPQPATPATAPGPSAEDVAAAAQQTPEQRSAMI
MGMVSRLEERLAADPKDLDGWLRLARAWSVLGDKTKAEAALQSARKAFADDAEAGRRLDAARQELGLGG

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40832; Mature: 40832

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSLPLFIAFALMTAAAVMAVLWPLSRRREAHSEREADLAVYRDQLAEIGRDQAAGRLPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCH
EQAEAARIEVSRRILAAAGTAGAASPAEANGVRRRRLAAIFVLILIPVVAAGIYGFTGAP
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TVPGAPLAARLTAPPDGNDIAILVRRVEEHLAANPNDGQGYELLAPVYARMGRLDDAARA
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
YRQAIRLLGNSAERQVALGEVLTLAANGMVTQEAAQAFAAAAALDPQSVKARYFLGLAAE
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEECCC
QDGRKADAAALWSSLLQSAPADAPWRPIVTAALARVGGRAPSTSVLRLPQPATPATAPGP
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCC
SAEDVAAAAQQTPEQRSAMIMGMVSRLEERLAADPKDLDGWLRLARAWSVLGDKTKAEAA
CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
LQSARKAFADDAEAGRRLDAARQELGLGG
HHHHHHHHHCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMSLPLFIAFALMTAAAVMAVLWPLSRRREAHSEREADLAVYRDQLAEIGRDQAAGRLPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCH
EQAEAARIEVSRRILAAAGTAGAASPAEANGVRRRRLAAIFVLILIPVVAAGIYGFTGAP
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TVPGAPLAARLTAPPDGNDIAILVRRVEEHLAANPNDGQGYELLAPVYARMGRLDDAARA
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
YRQAIRLLGNSAERQVALGEVLTLAANGMVTQEAAQAFAAAAALDPQSVKARYFLGLAAE
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHEEECCC
QDGRKADAAALWSSLLQSAPADAPWRPIVTAALARVGGRAPSTSVLRLPQPATPATAPGP
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCC
SAEDVAAAAQQTPEQRSAMIMGMVSRLEERLAADPKDLDGWLRLARAWSVLGDKTKAEAA
CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHH
LQSARKAFADDAEAGRRLDAARQELGLGG
HHHHHHHHHCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8231805; 12597275 [H]