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The map label for this gene is lipA

Identifier: 158422755

GI number: 158422755

Start: 1257849

End: 1258262

Strand: Direct

Name: lipA

Synonym: AZC_1131

Alternate gene names: NA

Gene position: 1257849-1258262 (Clockwise)

Preceding gene: 158422754

Following gene: 158422756

Centisome position: 23.42

GC content: 69.81

Gene sequence:

>414_bases
ATGATCGCGCCGAAGGTCATCTGTGTGTCGTTCCTTGCCCTTGCGCTCGCCGGCTGCGTCAGCACGTCCGACGATGGGCC
CAAGGTCGCCTCGGCGCCGGCGCCCGTGGTGTCCACCTCGCCCGTGCTCGGCGTGACGGCGGGTTATGCCAATGCGCCGC
TGGACGAGACGGACAAGCAGCGCGCCTATGCCGCCGAAGTACAGGCGCTGGAATATGGCGGTCCCGGCAGCCCCGTGGGC
TGGAAGGGCGACAGCGGTGCCTACGGCACGGTCATTGCCGGCCCCGCGTATGCCCGGCCGGGCAATCCCCAGTGTCGAGA
CTACTCACATACCATTTATGTGCAGGGTCGGCCCCTGACGACCCGCGGGGTCGCCTGCCGGGCGGCGGACGGCACCTGGG
GCGCGCCAAGCTGA

Upstream 100 bases:

>100_bases
GGGGCGGTCCGCCGCAGGCAGGCCCCTCCGCTTTCTCGTAAATTTTGTATCCTGTGCGTGCTCCGGTCCGTCCGCCGGAG
ACCCGAGCGAAGGCTCAGCC

Downstream 100 bases:

>100_bases
CGCAGGGTCGCCCCACAGCGCCCAGTCTTCCGGCGGCTATCTAATGACGCTTGCGTGAGACGCCGTCGCTGCGAAGGCCC
GCGACGGAAAGCAGCGTTGC

Product: LipA protein

Products: NA

Alternate protein names: Outer Membrane Lipoprotein-Related Protein; 17 KDa Surface Antigen; LipA Protein; Outer Membrane Protein; Lipoic Acid Synthetase; Outer-Membranne Lipoprotein

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MIAPKVICVSFLALALAGCVSTSDDGPKVASAPAPVVSTSPVLGVTAGYANAPLDETDKQRAYAAEVQALEYGGPGSPVG
WKGDSGAYGTVIAGPAYARPGNPQCRDYSHTIYVQGRPLTTRGVACRAADGTWGAPS

Sequences:

>Translated_137_residues
MIAPKVICVSFLALALAGCVSTSDDGPKVASAPAPVVSTSPVLGVTAGYANAPLDETDKQRAYAAEVQALEYGGPGSPVG
WKGDSGAYGTVIAGPAYARPGNPQCRDYSHTIYVQGRPLTTRGVACRAADGTWGAPS
>Mature_137_residues
MIAPKVICVSFLALALAGCVSTSDDGPKVASAPAPVVSTSPVLGVTAGYANAPLDETDKQRAYAAEVQALEYGGPGSPVG
WKGDSGAYGTVIAGPAYARPGNPQCRDYSHTIYVQGRPLTTRGVACRAADGTWGAPS

Specific function: Unknown

COG id: COG4520

COG function: function code M; Surface antigen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13855; Mature: 13855

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPKVICVSFLALALAGCVSTSDDGPKVASAPAPVVSTSPVLGVTAGYANAPLDETDKQ
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCHH
RAYAAEVQALEYGGPGSPVGWKGDSGAYGTVIAGPAYARPGNPQCRDYSHTIYVQGRPLT
HHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCC
TRGVACRAADGTWGAPS
CCCEEEEECCCCCCCCC
>Mature Secondary Structure
MIAPKVICVSFLALALAGCVSTSDDGPKVASAPAPVVSTSPVLGVTAGYANAPLDETDKQ
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCHH
RAYAAEVQALEYGGPGSPVGWKGDSGAYGTVIAGPAYARPGNPQCRDYSHTIYVQGRPLT
HHHHHHHEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCC
TRGVACRAADGTWGAPS
CCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA