| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422730
Identifier: 158422730
GI number: 158422730
Start: 1235013
End: 1235822
Strand: Reverse
Name: 158422730
Synonym: AZC_1106
Alternate gene names: NA
Gene position: 1235822-1235013 (Counterclockwise)
Preceding gene: 158422731
Following gene: 158422727
Centisome position: 23.01
GC content: 72.47
Gene sequence:
>810_bases ATGGCCATCGACAGCCACGCCCACATCTTCCGGCGCGACCTGCCGACCATTGCCGCCGCCCGCTACGTGCCGGCCTATGA CGCGCTGCCCGAGACCTATGCGGCCCTGCGGGCGGCCAACGGCTTTGCCGGCGGCGTGCTGGTGCAGCCGAGCTTCCTCG GTACGGACAATTCCTATCTGCTGGCCGCGATCGCTGCCGATCCCGACCATCTGCGCGGCATCGCCGTGGTGGCGCCGGAC TGCACCGAAGGGGCGATGCGCGGGCTTGCGGCTCAAGGCATCGCCGGCGTGCGGCTCAATCTGATCGGCCGGCCGGACCC GGATTTTGCCGATCCCGTCTGGCGCGCCTTCCTCGCGGCGGCGGCCCGCTGCGGTTTCCAGATCGAGGTGCAGGCGCAGG CCCGGCGGTATCCGCGCCTGCTGGCGGGGTTGCTGGAAAGCGACGTGCCGGCGGTGGTGGTGGACCATTTCGGCCTGCCG GACCCCGCCCTCGGCGTGAATGACCCCGGCTTGGCCGCCCTCATGCTGCTGGCTGCGCGCACGCCGCGCCTCTTCATGAA ACTCTCCGCGCCCTACCGCCTCGGGGGCGGCGATCCGCTGCCGCTGGCCGAGGCGGCCCGCGCCGCCTTTGGCGCCGGTC GCCTGATGATCGGCAGCGACTGGCCGCATACCCAGCACGAAAGCGAAGCCGACATCGCCGGCCTCAAGGCCCTCCTCGCC CGCGTCTTCCCGGCCCCCGAGCTGCCGCAGGTTCTCGGCGGCACCGCCGCCCGGCTGTTCGGCTTCCGGGCGCTTTTGGC CGCCGCCTGA
Upstream 100 bases:
>100_bases GCGGGCGTGCGCTCGTCCGCCCCGGCGCAATGAGCCGCCGCGCATCCGGTCCCGCAACATGAACGAACCCCTCGACGGCC GGCGGCGTTCCGCCGGCCTG
Downstream 100 bases:
>100_bases AACGGCGCGGGAGCGCCTTCAAAACCGCCGCACGCGCGGCGCCGGGGCGCGGGGGCCGAGGGCGAGCTGGGTGACGGCCC AGACGAGGGCGTCGAGCCGG
Product: metal-dependent hydrolase
Products: NA
Alternate protein names: Amidohydrolase; 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Dicarboxylic Acid Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Metal-Dependent Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MAIDSHAHIFRRDLPTIAAARYVPAYDALPETYAALRAANGFAGGVLVQPSFLGTDNSYLLAAIAADPDHLRGIAVVAPD CTEGAMRGLAAQGIAGVRLNLIGRPDPDFADPVWRAFLAAAARCGFQIEVQAQARRYPRLLAGLLESDVPAVVVDHFGLP DPALGVNDPGLAALMLLAARTPRLFMKLSAPYRLGGGDPLPLAEAARAAFGAGRLMIGSDWPHTQHESEADIAGLKALLA RVFPAPELPQVLGGTAARLFGFRALLAAA
Sequences:
>Translated_269_residues MAIDSHAHIFRRDLPTIAAARYVPAYDALPETYAALRAANGFAGGVLVQPSFLGTDNSYLLAAIAADPDHLRGIAVVAPD CTEGAMRGLAAQGIAGVRLNLIGRPDPDFADPVWRAFLAAAARCGFQIEVQAQARRYPRLLAGLLESDVPAVVVDHFGLP DPALGVNDPGLAALMLLAARTPRLFMKLSAPYRLGGGDPLPLAEAARAAFGAGRLMIGSDWPHTQHESEADIAGLKALLA RVFPAPELPQVLGGTAARLFGFRALLAAA >Mature_268_residues AIDSHAHIFRRDLPTIAAARYVPAYDALPETYAALRAANGFAGGVLVQPSFLGTDNSYLLAAIAADPDHLRGIAVVAPDC TEGAMRGLAAQGIAGVRLNLIGRPDPDFADPVWRAFLAAAARCGFQIEVQAQARRYPRLLAGLLESDVPAVVVDHFGLPD PALGVNDPGLAALMLLAARTPRLFMKLSAPYRLGGGDPLPLAEAARAAFGAGRLMIGSDWPHTQHESEADIAGLKALLAR VFPAPELPQVLGGTAARLFGFRALLAAA
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28182; Mature: 28051
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDSHAHIFRRDLPTIAAARYVPAYDALPETYAALRAANGFAGGVLVQPSFLGTDNSYL CCCCCHHHHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCEE LAAIAADPDHLRGIAVVAPDCTEGAMRGLAAQGIAGVRLNLIGRPDPDFADPVWRAFLAA EEEEECCHHHHCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHH AARCGFQIEVQAQARRYPRLLAGLLESDVPAVVVDHFGLPDPALGVNDPGLAALMLLAAR HHHCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHC TPRLFMKLSAPYRLGGGDPLPLAEAARAAFGAGRLMIGSDWPHTQHESEADIAGLKALLA CCCEEEEECCCEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHH RVFPAPELPQVLGGTAARLFGFRALLAAA HHCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AIDSHAHIFRRDLPTIAAARYVPAYDALPETYAALRAANGFAGGVLVQPSFLGTDNSYL CCCCHHHHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCEE LAAIAADPDHLRGIAVVAPDCTEGAMRGLAAQGIAGVRLNLIGRPDPDFADPVWRAFLAA EEEEECCHHHHCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHH AARCGFQIEVQAQARRYPRLLAGLLESDVPAVVVDHFGLPDPALGVNDPGLAALMLLAAR HHHCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHC TPRLFMKLSAPYRLGGGDPLPLAEAARAAFGAGRLMIGSDWPHTQHESEADIAGLKALLA CCCEEEEECCCEECCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHH RVFPAPELPQVLGGTAARLFGFRALLAAA HHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA