| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is mmlH [H]
Identifier: 158422731
GI number: 158422731
Start: 1235890
End: 1237176
Strand: Reverse
Name: mmlH [H]
Synonym: AZC_1107
Alternate gene names: 158422731
Gene position: 1237176-1235890 (Counterclockwise)
Preceding gene: 158422732
Following gene: 158422730
Centisome position: 23.04
GC content: 69.62
Gene sequence:
>1287_bases ATGTTCAGTTGGTTCCGCGAGATCGACGCCACCGAGCGCAAGACATTCTGGGCCTGCTTCGGCGGCTGGGCGCTCGATGC GCTCGACGTCCAGCTCTTCTCCCTCGTCATCCCGACGCTGCTTGCCCTCTGGCACATCAGCAAGGCCGATGCGGGCATGA TCACCAGCGTGACGCTCATCGCCTCGGCGCTGGGCGGCTGGGTCGGCGGGGCCATTTCGGACCGCATCGGCCGCGTGCGC GCCCTGCAGGTGATGATCCTGTGGTTCGCGCTCGCGACCTTCGCCTCCGCCTTCGCGCAGGATTACAACCAGCTCCTCGT GCTGAAAGCCTTGCAGGGCCTCGGCTTCGGCGGCGAATGGGCGGCCGGTGTCGCGCTCATGAGCGAGGCCATCCGCCCGA GCCACCGCGGCAAGGCGCTGGGCACCGTGCAGAGCGCCTGGGCCGTGGGCTGGGGCGCCTCGGTGCTGATCCAGACCAGC ATCTATTCCTTCGTGCCGCCGGAAATCGCCTGGCGCCTGCTGTTCGGCCTCGGCCTCATCCCGGCGATCCTCGTCATCTT CGTGCGCCGCCATGTGCCCGAGCCCGAGGCCTCGCCGGCCCGCGCGCCCAAGGCGCAGCAGGCGCGCACGCCGCTGCTCG GCATCTTCTCGCCGGACGTGCTGCGCGTCACGCTGGTGGGCCTTCTGCTCGGCACCGGCGCCCACGGCGGCTATTACGCG GTGACGAGCTGGCTGCCCACGTATCTCAAGACCGAGCGCCATCTCTCCACGCTGGGCACCGGCGCCTATCTGGCGGTCAT CATCGTCGCCTTCTTCTTCGGCTGCATCGCCGCCGCGCATCTGCTGGACCGCATCGGCCGCCGGCGCACGGTGGGCCTGT TCGCGCTCTCCTGCGTCATCGTCGTGCTGGCCTATGTGTTCCTGCCCATCGGCGACACCGCCATGCTGATCCTCGGCTTC CCGCTGGGCTTCTGCTCGGCCGGCATTCCGGCCAGCATGGGCGCGCTGTTCTCCGAGCTGTATCCGGGCGGCATCCGCGG CACCGGCGTCGGCTTCTGCTACAATGCCGGGCGCATCGTTTCCGCCATCTTCCCCTTCCTCGTCGGCCATCTGTCCGAGC AGATGTCGCTCGGCGCCGCCATCGGCATCGATGCAGCGGTGGCCTATGGCCTCGTGGTGGTGGCGGTGCTCATGCTACCC GAGACCAAGGCGGTGAAGCTCGACGCGGTGGACGCGCCCGGCGCGCCGGCCGGTGCGGGCGTGCGCTCGTCCGCCCCGGC GCAATGA
Upstream 100 bases:
>100_bases CGAGATCCGCTGAGCGGTCCGCCGCTCATTTTCGTTCGCAACCGTTCACGCAAGGCGCCAGCCGGCCGCAAGAGCCGCGC GGGCCTGCCGGAGGACACCC
Downstream 100 bases:
>100_bases GCCGCCGCGCATCCGGTCCCGCAACATGAACGAACCCCTCGACGGCCGGCGGCGTTCCGCCGGCCTGATGGCCATCGACA GCCACGCCCACATCTTCCGG
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MFSWFREIDATERKTFWACFGGWALDALDVQLFSLVIPTLLALWHISKADAGMITSVTLIASALGGWVGGAISDRIGRVR ALQVMILWFALATFASAFAQDYNQLLVLKALQGLGFGGEWAAGVALMSEAIRPSHRGKALGTVQSAWAVGWGASVLIQTS IYSFVPPEIAWRLLFGLGLIPAILVIFVRRHVPEPEASPARAPKAQQARTPLLGIFSPDVLRVTLVGLLLGTGAHGGYYA VTSWLPTYLKTERHLSTLGTGAYLAVIIVAFFFGCIAAAHLLDRIGRRRTVGLFALSCVIVVLAYVFLPIGDTAMLILGF PLGFCSAGIPASMGALFSELYPGGIRGTGVGFCYNAGRIVSAIFPFLVGHLSEQMSLGAAIGIDAAVAYGLVVVAVLMLP ETKAVKLDAVDAPGAPAGAGVRSSAPAQ
Sequences:
>Translated_428_residues MFSWFREIDATERKTFWACFGGWALDALDVQLFSLVIPTLLALWHISKADAGMITSVTLIASALGGWVGGAISDRIGRVR ALQVMILWFALATFASAFAQDYNQLLVLKALQGLGFGGEWAAGVALMSEAIRPSHRGKALGTVQSAWAVGWGASVLIQTS IYSFVPPEIAWRLLFGLGLIPAILVIFVRRHVPEPEASPARAPKAQQARTPLLGIFSPDVLRVTLVGLLLGTGAHGGYYA VTSWLPTYLKTERHLSTLGTGAYLAVIIVAFFFGCIAAAHLLDRIGRRRTVGLFALSCVIVVLAYVFLPIGDTAMLILGF PLGFCSAGIPASMGALFSELYPGGIRGTGVGFCYNAGRIVSAIFPFLVGHLSEQMSLGAAIGIDAAVAYGLVVVAVLMLP ETKAVKLDAVDAPGAPAGAGVRSSAPAQ >Mature_428_residues MFSWFREIDATERKTFWACFGGWALDALDVQLFSLVIPTLLALWHISKADAGMITSVTLIASALGGWVGGAISDRIGRVR ALQVMILWFALATFASAFAQDYNQLLVLKALQGLGFGGEWAAGVALMSEAIRPSHRGKALGTVQSAWAVGWGASVLIQTS IYSFVPPEIAWRLLFGLGLIPAILVIFVRRHVPEPEASPARAPKAQQARTPLLGIFSPDVLRVTLVGLLLGTGAHGGYYA VTSWLPTYLKTERHLSTLGTGAYLAVIIVAFFFGCIAAAHLLDRIGRRRTVGLFALSCVIVVLAYVFLPIGDTAMLILGF PLGFCSAGIPASMGALFSELYPGGIRGTGVGFCYNAGRIVSAIFPFLVGHLSEQMSLGAAIGIDAAVAYGLVVVAVLMLP ETKAVKLDAVDAPGAPAGAGVRSSAPAQ
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=443, Percent_Identity=24.6049661399549, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI213021148, Length=446, Percent_Identity=22.4215246636771, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI87082404, Length=399, Percent_Identity=24.3107769423559, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI87082231, Length=207, Percent_Identity=28.5024154589372, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI87081723, Length=398, Percent_Identity=27.1356783919598, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI87082159, Length=397, Percent_Identity=28.9672544080605, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786229, Length=396, Percent_Identity=23.7373737373737, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1790550, Length=348, Percent_Identity=23.5632183908046, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1788942, Length=355, Percent_Identity=24.2253521126761, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI32564663, Length=433, Percent_Identity=24.0184757505774, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI19922874, Length=412, Percent_Identity=23.3009708737864, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45145; Mature: 45145
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSWFREIDATERKTFWACFGGWALDALDVQLFSLVIPTLLALWHISKADAGMITSVTLI CCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ASALGGWVGGAISDRIGRVRALQVMILWFALATFASAFAQDYNQLLVLKALQGLGFGGEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AAGVALMSEAIRPSHRGKALGTVQSAWAVGWGASVLIQTSIYSFVPPEIAWRLLFGLGLI HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH PAILVIFVRRHVPEPEASPARAPKAQQARTPLLGIFSPDVLRVTLVGLLLGTGAHGGYYA HHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHH VTSWLPTYLKTERHLSTLGTGAYLAVIIVAFFFGCIAAAHLLDRIGRRRTVGLFALSCVI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VVLAYVFLPIGDTAMLILGFPLGFCSAGIPASMGALFSELYPGGIRGTGVGFCYNAGRIV HHHHHHHHCCCCHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEECHHHHH SAIFPFLVGHLSEQMSLGAAIGIDAAVAYGLVVVAVLMLPETKAVKLDAVDAPGAPAGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC VRSSAPAQ CCCCCCCC >Mature Secondary Structure MFSWFREIDATERKTFWACFGGWALDALDVQLFSLVIPTLLALWHISKADAGMITSVTLI CCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH ASALGGWVGGAISDRIGRVRALQVMILWFALATFASAFAQDYNQLLVLKALQGLGFGGEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AAGVALMSEAIRPSHRGKALGTVQSAWAVGWGASVLIQTSIYSFVPPEIAWRLLFGLGLI HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH PAILVIFVRRHVPEPEASPARAPKAQQARTPLLGIFSPDVLRVTLVGLLLGTGAHGGYYA HHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHH VTSWLPTYLKTERHLSTLGTGAYLAVIIVAFFFGCIAAAHLLDRIGRRRTVGLFALSCVI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VVLAYVFLPIGDTAMLILGFPLGFCSAGIPASMGALFSELYPGGIRGTGVGFCYNAGRIV HHHHHHHHCCCCHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEECHHHHH SAIFPFLVGHLSEQMSLGAAIGIDAAVAYGLVVVAVLMLPETKAVKLDAVDAPGAPAGAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC VRSSAPAQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]