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The map label for this gene is ahpD

Identifier: 158422674

GI number: 158422674

Start: 1180185

End: 1180730

Strand: Reverse

Name: ahpD

Synonym: AZC_1050

Alternate gene names: 158422674

Gene position: 1180730-1180185 (Counterclockwise)

Preceding gene: 158422675

Following gene: 158422673

Centisome position: 21.99

GC content: 67.22

Gene sequence:

>546_bases
ATGAGCATCGAGGCGCTCAAGACCCAGCTTCCCGCTTTTGCGAAGGACGTGAAGCTCAACCTTTCCGCCCTGCCGCGGGA
GGACAGCCTGACCGAACAGCAGCTCTACGGGCTGCTGGTCGCCTGCGGCTACACCACGCGCAACGGCACGGTCGCGCAGG
CACTGGAGGCAGAGGCCGCCCCCCACCTTTCGCCGGCCGCGCTCGACGCGGCGAAGGCGGCGGCCTCCATCATGGCCATG
AACAACGTCTACTATCGATTTACGCATCTGGCCTCCAACAAGGCCTATGAGACCCTGCCGGCGAAGCTCCGCATGAGCGT
CATCGGCAATCCCGGCGTGGACAAGGTGGACTTCGAACTCTGGTCGCTCGCCGTCTCGGCCATGAACGGATGCGGCCGCT
GCATCGATGCCCATGAGGCGGTGCTGCGCGAGGCGGGCCTCAGCGAGGCCCAGATCCAGACGGCGGTGCGCGTCGGCGCC
ATCATCGCCTCCGCCGCGGTGGCCCTCGAGGCCGCCGGCGCGGGTTTTCCGGAAGCTGCGGAATAA

Upstream 100 bases:

>100_bases
CCGAAGGACACGCTGCGCGTGCTCGACGCCCTGCAGACGGACGAACTGTGCCCCTGCAACCGCGAGGTCGGCGGCGACGT
GCTGAAGGTGGCCTGAGCGG

Downstream 100 bases:

>100_bases
GCGCGGCCCTGCCTCCGTCCCCGCCGCCAGGGCTTCGGGGACGGATACCTTCAAAATTTGATCCAGATCAAAGCCGTCCG
TTGTCTCCGCGGTTTCCATT

Product: alkylhydroperoxidase

Products: NA

Alternate protein names: Alkylhydroperoxidase AhpD

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSIEALKTQLPAFAKDVKLNLSALPREDSLTEQQLYGLLVACGYTTRNGTVAQALEAEAAPHLSPAALDAAKAAASIMAM
NNVYYRFTHLASNKAYETLPAKLRMSVIGNPGVDKVDFELWSLAVSAMNGCGRCIDAHEAVLREAGLSEAQIQTAVRVGA
IIASAAVALEAAGAGFPEAAE

Sequences:

>Translated_181_residues
MSIEALKTQLPAFAKDVKLNLSALPREDSLTEQQLYGLLVACGYTTRNGTVAQALEAEAAPHLSPAALDAAKAAASIMAM
NNVYYRFTHLASNKAYETLPAKLRMSVIGNPGVDKVDFELWSLAVSAMNGCGRCIDAHEAVLREAGLSEAQIQTAVRVGA
IIASAAVALEAAGAGFPEAAE
>Mature_180_residues
SIEALKTQLPAFAKDVKLNLSALPREDSLTEQQLYGLLVACGYTTRNGTVAQALEAEAAPHLSPAALDAAKAAASIMAMN
NVYYRFTHLASNKAYETLPAKLRMSVIGNPGVDKVDFELWSLAVSAMNGCGRCIDAHEAVLREAGLSEAQIQTAVRVGAI
IASAAVALEAAGAGFPEAAE

Specific function: Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AhpD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AHPD_AZOC5 (A8HQP5)

Other databases:

- EMBL:   AP009384
- RefSeq:   YP_001523966.1
- ProteinModelPortal:   A8HQP5
- SMR:   A8HQP5
- GeneID:   5688393
- GenomeReviews:   AP009384_GR
- KEGG:   azc:AZC_1050
- HOGENOM:   HBG414634
- OMA:   PEYAKDL
- BioCyc:   ACAU438753:AZC_1050-MONOMER
- HAMAP:   MF_01676
- InterPro:   IPR004674
- InterPro:   IPR004675
- InterPro:   IPR003779
- TIGRFAMs:   TIGR00777
- TIGRFAMs:   TIGR00778

Pfam domain/function: PF02627 CMD

EC number: =1.11.1.15

Molecular weight: Translated: 18933; Mature: 18802

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: ACT_SITE 131-131 ACT_SITE 134-134

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEALKTQLPAFAKDVKLNLSALPREDSLTEQQLYGLLVACGYTTRNGTVAQALEAEAA
CCHHHHHHHHHHHHHHHEECHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
PHLSPAALDAAKAAASIMAMNNVYYRFTHLASNKAYETLPAKLRMSVIGNPGVDKVDFEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCHHHHHH
WSLAVSAMNGCGRCIDAHEAVLREAGLSEAQIQTAVRVGAIIASAAVALEAAGAGFPEAA
HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
E
C
>Mature Secondary Structure 
SIEALKTQLPAFAKDVKLNLSALPREDSLTEQQLYGLLVACGYTTRNGTVAQALEAEAA
CHHHHHHHHHHHHHHHEECHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
PHLSPAALDAAKAAASIMAMNNVYYRFTHLASNKAYETLPAKLRMSVIGNPGVDKVDFEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCHHHHHH
WSLAVSAMNGCGRCIDAHEAVLREAGLSEAQIQTAVRVGAIIASAAVALEAAGAGFPEAA
HHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA