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The map label for this gene is sufD [C]

Identifier: 158422670

GI number: 158422670

Start: 1174387

End: 1175721

Strand: Direct

Name: sufD [C]

Synonym: AZC_1046

Alternate gene names: 158422670

Gene position: 1174387-1175721 (Clockwise)

Preceding gene: 158422669

Following gene: 158422671

Centisome position: 21.87

GC content: 69.36

Gene sequence:

>1335_bases
GTGATGAACGCGCCCGTCGCCATCAAGACCGAAGCCGAACAGGGGCTGATCAGCGCTTTCGCGGCGGCTCAACCGACCCT
GCCGGGCGGGCCGGGCGTTTCCGCCGCGCGCCTCGCCGCCTTCGAGGCCTTCAACCGGGTGGGGCTGCCGCACCGGCGCG
TGGAAGCCTGGAAATATACCGACCTGCGCCGCCTGATGCGCGACGCCAAGCCGCTTGCGCCGCTGCCGGATGCCGCCGCC
AAGGCTGAGGCGGCCTCTGCCGGCGCGCTGCTGGCGGGCCTTGGCCTGCGGCGGCTCGTGGTGGTGGATGGCAGCTTGGC
GCCGGAGCTGTCCGATCTGGCGGATCTCGAACCCGGCCTTACCATCCGCCCCATGGCGGAGGTGTTCGGCGAGGACGGGC
CGCTGCTGCCGGACTCCTTGCGCGACGCATTGCCGGACGTGGAGCCCGCGCTGGCGCTCAATGCCGCCTTCGCTCGGGAT
GGCGTCTTCATCGGCGTCGCGCCGGGCGCGGTTGTCACGCGGCCGATCCATGTGGCCTTCATCACCACTGGCGATGCGCC
GCAAGCCGTCTTCAGCCGTTCGCGCGTTGTGCTGGGCGCTGAGGCGCAGCTGGCACTGGTGGAGACCCATGAGGCGAAGG
CCGGCGTCGAGCATCAGGTGAATGTCGCACTCGGCCTGCTGGTGGGTGACAAGGCACAGCTCGATCATGTGAAGGTGACG
GGCGAGGGCAGCGCCGTTCTCCATGTGGGCAGTCTGGTCGCGAGTGTCGGGGCGCAGGCGCGTTTCGGCTCGTGCGGCTT
CACCCTCGGCGGCGCCACGGTGCGCAACCAGCTCTATGTGCGCTTGGTCGGCGAGACGACAGAGCTGAACCTTGCCGGCG
CGAGCCTGCTCTGCGGCAAGCAGCATGCGGACACGGCGCTCTTCTTGACCCACGCAGCGCCGGGCAGCACCAGCCGCGAA
GTGTTCAAGGCGGTAGTGGACGACAAGGCCGAAGCAGCCTTCCAGGGCCGCATCACAGTGGAGCAGGCGGCGCAGCAGAC
GGACGCGCGGATGATGTCGCGCGCCCTGCTGCTCTCCGAGGAGGCCGAGGCCTATTCCAAGCCGGAGCTGGAAATCTTCG
CCGATGATGTCCAGTGCGGCCATGGCGCCACCGTGGGCACGCTGGATGAGCAGCTGAAATTCTATCTGAAGGCCCGCGGC
ATTCCCGCCAAGGAGGCGGAGGCGCTGCTGATCCAGGCCTTCATCGGCGAGGTGCTGGACGGCATCGCGCACGAGGGCGT
CCGCGAGGCGTTGACCGCCGCAACGGTGAGCTGGCTGGAGGCGCGCGGCGCATGA

Upstream 100 bases:

>100_bases
ACGTGCTGGCGGCGGGCCGCATCGTGGAAACCGGCGGCAAGGATCTGGCCCTCCAGCTCGAAGCTACCGGCTATGCGCAG
TATCAGCAGAGCGAGGCGGC

Downstream 100 bases:

>100_bases
ACATGCATCCTTCCGTCACGCCCCCGACCGTGCCCGCCCATCCGGCGGTGACCGGGGAGGCCTATGACGTGGCGCGCGTG
CGCGCGGATTTCCCCATCCT

Product: FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MMNAPVAIKTEAEQGLISAFAAAQPTLPGGPGVSAARLAAFEAFNRVGLPHRRVEAWKYTDLRRLMRDAKPLAPLPDAAA
KAEAASAGALLAGLGLRRLVVVDGSLAPELSDLADLEPGLTIRPMAEVFGEDGPLLPDSLRDALPDVEPALALNAAFARD
GVFIGVAPGAVVTRPIHVAFITTGDAPQAVFSRSRVVLGAEAQLALVETHEAKAGVEHQVNVALGLLVGDKAQLDHVKVT
GEGSAVLHVGSLVASVGAQARFGSCGFTLGGATVRNQLYVRLVGETTELNLAGASLLCGKQHADTALFLTHAAPGSTSRE
VFKAVVDDKAEAAFQGRITVEQAAQQTDARMMSRALLLSEEAEAYSKPELEIFADDVQCGHGATVGTLDEQLKFYLKARG
IPAKEAEALLIQAFIGEVLDGIAHEGVREALTAATVSWLEARGA

Sequences:

>Translated_444_residues
MMNAPVAIKTEAEQGLISAFAAAQPTLPGGPGVSAARLAAFEAFNRVGLPHRRVEAWKYTDLRRLMRDAKPLAPLPDAAA
KAEAASAGALLAGLGLRRLVVVDGSLAPELSDLADLEPGLTIRPMAEVFGEDGPLLPDSLRDALPDVEPALALNAAFARD
GVFIGVAPGAVVTRPIHVAFITTGDAPQAVFSRSRVVLGAEAQLALVETHEAKAGVEHQVNVALGLLVGDKAQLDHVKVT
GEGSAVLHVGSLVASVGAQARFGSCGFTLGGATVRNQLYVRLVGETTELNLAGASLLCGKQHADTALFLTHAAPGSTSRE
VFKAVVDDKAEAAFQGRITVEQAAQQTDARMMSRALLLSEEAEAYSKPELEIFADDVQCGHGATVGTLDEQLKFYLKARG
IPAKEAEALLIQAFIGEVLDGIAHEGVREALTAATVSWLEARGA
>Mature_444_residues
MMNAPVAIKTEAEQGLISAFAAAQPTLPGGPGVSAARLAAFEAFNRVGLPHRRVEAWKYTDLRRLMRDAKPLAPLPDAAA
KAEAASAGALLAGLGLRRLVVVDGSLAPELSDLADLEPGLTIRPMAEVFGEDGPLLPDSLRDALPDVEPALALNAAFARD
GVFIGVAPGAVVTRPIHVAFITTGDAPQAVFSRSRVVLGAEAQLALVETHEAKAGVEHQVNVALGLLVGDKAQLDHVKVT
GEGSAVLHVGSLVASVGAQARFGSCGFTLGGATVRNQLYVRLVGETTELNLAGASLLCGKQHADTALFLTHAAPGSTSRE
VFKAVVDDKAEAAFQGRITVEQAAQQTDARMMSRALLLSEEAEAYSKPELEIFADDVQCGHGATVGTLDEQLKFYLKARG
IPAKEAEALLIQAFIGEVLDGIAHEGVREALTAATVSWLEARGA

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=391, Percent_Identity=31.4578005115089, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI87081955, Length=317, Percent_Identity=22.397476340694, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46270; Mature: 46270

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNAPVAIKTEAEQGLISAFAAAQPTLPGGPGVSAARLAAFEAFNRVGLPHRRVEAWKYT
CCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
DLRRLMRDAKPLAPLPDAAAKAEAASAGALLAGLGLRRLVVVDGSLAPELSDLADLEPGL
HHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCC
TIRPMAEVFGEDGPLLPDSLRDALPDVEPALALNAAFARDGVFIGVAPGAVVTRPIHVAF
EEEEHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCEEECEEEEEE
ITTGDAPQAVFSRSRVVLGAEAQLALVETHEAKAGVEHQVNVALGLLVGDKAQLDHVKVT
EECCCCHHHHHCCCCEEEECCCEEEEEECCCHHCCCCEEEEEEEEEEECCCCCCCEEEEE
GEGSAVLHVGSLVASVGAQARFGSCGFTLGGATVRNQLYVRLVGETTELNLAGASLLCGK
CCCCEEEHHHHHHHHHCCCCCCCCCCEEECCHHHCCEEEEEEECCCEEEEECCCCEECCC
QHADTALFLTHAAPGSTSREVFKAVVDDKAEAAFQGRITVEQAAQQTDARMMSRALLLSE
CCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
EAEAYSKPELEIFADDVQCGHGATVGTLDEQLKFYLKARGIPAKEAEALLIQAFIGEVLD
HHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GIAHEGVREALTAATVSWLEARGA
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMNAPVAIKTEAEQGLISAFAAAQPTLPGGPGVSAARLAAFEAFNRVGLPHRRVEAWKYT
CCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
DLRRLMRDAKPLAPLPDAAAKAEAASAGALLAGLGLRRLVVVDGSLAPELSDLADLEPGL
HHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCC
TIRPMAEVFGEDGPLLPDSLRDALPDVEPALALNAAFARDGVFIGVAPGAVVTRPIHVAF
EEEEHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCEEEEECCCCEEECEEEEEE
ITTGDAPQAVFSRSRVVLGAEAQLALVETHEAKAGVEHQVNVALGLLVGDKAQLDHVKVT
EECCCCHHHHHCCCCEEEECCCEEEEEECCCHHCCCCEEEEEEEEEEECCCCCCCEEEEE
GEGSAVLHVGSLVASVGAQARFGSCGFTLGGATVRNQLYVRLVGETTELNLAGASLLCGK
CCCCEEEHHHHHHHHHCCCCCCCCCCEEECCHHHCCEEEEEEECCCEEEEECCCCEECCC
QHADTALFLTHAAPGSTSREVFKAVVDDKAEAAFQGRITVEQAAQQTDARMMSRALLLSE
CCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
EAEAYSKPELEIFADDVQCGHGATVGTLDEQLKFYLKARGIPAKEAEALLIQAFIGEVLD
HHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GIAHEGVREALTAATVSWLEARGA
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]