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The map label for this gene is sufC [C]

Identifier: 158422669

GI number: 158422669

Start: 1173608

End: 1174390

Strand: Direct

Name: sufC [C]

Synonym: AZC_1045

Alternate gene names: 158422669

Gene position: 1173608-1174390 (Clockwise)

Preceding gene: 158422668

Following gene: 158422670

Centisome position: 21.86

GC content: 65.01

Gene sequence:

>783_bases
TTGCAAGGCGAGGACTTCGTGATGACCGCTCTCCTGGAAATCCGCGACCTCAAGGCCGAAGTGGCCGGGCGCCAGATCCT
CAACGGGCTGAACCTCACCGTGAATGCGGGCGAGATCCACGCCATCATGGGGCCGAACGGAGCGGGCAAGTCCACGCTCT
CTTATGTGCTTTCCGGCAAGCCGGGCTATGAGATCACCGGCGGCGAGGTCTTCCTCAATGGCGAGGATCTCCTGGCCATG
GAGGCGGACGAGCGGGCCGCCAAGGGCCTTTTCCTCGCCTTCCAGTATCCGCTGGAAATCCCCGGCGTCGCGACCCTCAC
CTTCCTGCGCACGGCGCTCAATGCCCAGCGCCGCAAGCGGGGCGAGGAGGAATTGTCCTCGCCCGATTTCATGAAGAAGG
TGCGCGAGCTGTCGAAGAAGCTCGGCATCGATCCGGACATGCTGCGCCGGCCGGTGAATGTCGGCTTCTCCGGTGGCGAG
AAGAAGCGCAACGAGACCCTTCAGATGGCGCTGCTGGAGCCGCGCCTGTGCGTGCTGGACGAGACCGACTCCGGCCTCGA
CATCGACGCGCTGAAGGTGGTGGCGAATGGCGTCAACCAGCTGCGCGCCGCTGAGCGGGGGATGATCGTCATCACCCACT
ACCAGCGCCTGCTCGATTACATCGTGCCCGACGTGGTGCACGTGCTGGCGGCGGGCCGCATCGTGGAAACCGGCGGCAAG
GATCTGGCCCTCCAGCTCGAAGCTACCGGCTATGCGCAGTATCAGCAGAGCGAGGCGGCGTGA

Upstream 100 bases:

>100_bases
GAGGTGCTCCAGCAGCTCCCCATGGAATTCGCGGTGGAGGCGCAGAAGCTCATCTCCATCTCGCTCGAAGGCAGCGTCGG
CTGACCTGTCGCTTCTCCAA

Downstream 100 bases:

>100_bases
TGAACGCGCCCGTCGCCATCAAGACCGAAGCCGAACAGGGGCTGATCAGCGCTTTCGCGGCGGCTCAACCGACCCTGCCG
GGCGGGCCGGGCGTTTCCGC

Product: FeS assembly ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MQGEDFVMTALLEIRDLKAEVAGRQILNGLNLTVNAGEIHAIMGPNGAGKSTLSYVLSGKPGYEITGGEVFLNGEDLLAM
EADERAAKGLFLAFQYPLEIPGVATLTFLRTALNAQRRKRGEEELSSPDFMKKVRELSKKLGIDPDMLRRPVNVGFSGGE
KKRNETLQMALLEPRLCVLDETDSGLDIDALKVVANGVNQLRAAERGMIVITHYQRLLDYIVPDVVHVLAAGRIVETGGK
DLALQLEATGYAQYQQSEAA

Sequences:

>Translated_260_residues
MQGEDFVMTALLEIRDLKAEVAGRQILNGLNLTVNAGEIHAIMGPNGAGKSTLSYVLSGKPGYEITGGEVFLNGEDLLAM
EADERAAKGLFLAFQYPLEIPGVATLTFLRTALNAQRRKRGEEELSSPDFMKKVRELSKKLGIDPDMLRRPVNVGFSGGE
KKRNETLQMALLEPRLCVLDETDSGLDIDALKVVANGVNQLRAAERGMIVITHYQRLLDYIVPDVVHVLAAGRIVETGGK
DLALQLEATGYAQYQQSEAA
>Mature_260_residues
MQGEDFVMTALLEIRDLKAEVAGRQILNGLNLTVNAGEIHAIMGPNGAGKSTLSYVLSGKPGYEITGGEVFLNGEDLLAM
EADERAAKGLFLAFQYPLEIPGVATLTFLRTALNAQRRKRGEEELSSPDFMKKVRELSKKLGIDPDMLRRPVNVGFSGGE
KKRNETLQMALLEPRLCVLDETDSGLDIDALKVVANGVNQLRAAERGMIVITHYQRLLDYIVPDVVHVLAAGRIVETGGK
DLALQLEATGYAQYQQSEAA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42741659, Length=241, Percent_Identity=29.4605809128631, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787972, Length=248, Percent_Identity=58.0645161290323, Blast_Score=293, Evalue=8e-81,
Organism=Escherichia coli, GI1787500, Length=250, Percent_Identity=30.4, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787370, Length=235, Percent_Identity=24.6808510638298, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788225, Length=235, Percent_Identity=28.0851063829787, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786319, Length=252, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789593, Length=240, Percent_Identity=25.8333333333333, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787029, Length=236, Percent_Identity=25, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787759, Length=231, Percent_Identity=29.4372294372294, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786345, Length=216, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789962, Length=245, Percent_Identity=28.9795918367347, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788761, Length=241, Percent_Identity=25.3112033195021, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787792, Length=238, Percent_Identity=24.7899159663866, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789864, Length=239, Percent_Identity=25.1046025104602, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790525, Length=190, Percent_Identity=27.8947368421053, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI48994883, Length=252, Percent_Identity=27.7777777777778, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788210, Length=232, Percent_Identity=24.5689655172414, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI1789891, Length=224, Percent_Identity=29.0178571428571, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=219, Percent_Identity=30.1369863013699, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=214, Percent_Identity=27.1028037383178, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193209708, Length=254, Percent_Identity=28.740157480315, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=217, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=228, Percent_Identity=25.8771929824561, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI281363262, Length=228, Percent_Identity=30.7017543859649, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24653245, Length=228, Percent_Identity=30.7017543859649, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28327; Mature: 28327

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGEDFVMTALLEIRDLKAEVAGRQILNGLNLTVNAGEIHAIMGPNGAGKSTLSYVLSGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCHHHHHEECCC
PGYEITGGEVFLNGEDLLAMEADERAAKGLFLAFQYPLEIPGVATLTFLRTALNAQRRKR
CCCEEECCEEEECCCCEEEECCCHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHC
GEEELSSPDFMKKVRELSKKLGIDPDMLRRPVNVGFSGGEKKRNETLQMALLEPRLCVLD
CHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
ETDSGLDIDALKVVANGVNQLRAAERGMIVITHYQRLLDYIVPDVVHVLAAGRIVETGGK
CCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCC
DLALQLEATGYAQYQQSEAA
EEEEEEEECCCHHHHHCCCC
>Mature Secondary Structure
MQGEDFVMTALLEIRDLKAEVAGRQILNGLNLTVNAGEIHAIMGPNGAGKSTLSYVLSGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCHHHHHEECCC
PGYEITGGEVFLNGEDLLAMEADERAAKGLFLAFQYPLEIPGVATLTFLRTALNAQRRKR
CCCEEECCEEEECCCCEEEECCCHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHC
GEEELSSPDFMKKVRELSKKLGIDPDMLRRPVNVGFSGGEKKRNETLQMALLEPRLCVLD
CHHHCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
ETDSGLDIDALKVVANGVNQLRAAERGMIVITHYQRLLDYIVPDVVHVLAAGRIVETGGK
CCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCC
DLALQLEATGYAQYQQSEAA
EEEEEEEECCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]