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The map label for this gene is amaB [H]

Identifier: 158422411

GI number: 158422411

Start: 888436

End: 889692

Strand: Reverse

Name: amaB [H]

Synonym: AZC_0787

Alternate gene names: 158422411

Gene position: 889692-888436 (Counterclockwise)

Preceding gene: 158422412

Following gene: 158422401

Centisome position: 16.57

GC content: 70.96

Gene sequence:

>1257_bases
GTGATGTCCGTGGCCACCGAAAGCAGTGCCACCGATGTTCTAGAGGGCAGCCGGCTCCTAGCGCGCCTTGAAGCGCTCGC
GCGTTTCACAGACGTGCCGGGCGAAATGACCCGCCTCACCCTCTCCCCCGCCCACAAGGCGGCGGCGGCGGAGGTGGCGC
GCTGGTTCGCGGCGGCCGGTATGGCGGTGCATCTCGACGCCACAGGCTCGGTCGTAGGGCGCTATGAGGGCACGCAGCCC
GATGCGCCCGCCCTGATCCTCGGCTCGCACATCGACACCGTGCGCAATGCCGGCATCTTCGACGGCAACCTCGGCGTCGT
CGTCGCCCTCGCGGTGGTGGAGCAATTGCACGCCGACGGCGTGCGCCTGCCCTTCGCGCTGGAGGTGCATGCCTTTGCGG
ATGAGGAAGGCGTACGCTTTCCCTCCACCCTCACCTCCTCCCGCGCCCTCGCCGGCCGCTTCGATGCCGCCGCCCTGGAC
GCCACGGACGCGGACGGCATCACCCGCCGCGAAGCCCTGAAGGCCTTCGGTGTTGATCCCGAAGCTTATGCCGCCTGCAG
CCGCGCCGGACGGGCGCTCGGCTATGTGGAAGTGCATATTGAACAGGGGCCGGTGCTGGAGGCGAAGGGCCTGCCGGTGG
GCATCGTCACGGCCATCGCCGGGGCGACCCGCGGTACCATTGAGCTCGTCGGCGAGGCCGGCCATTCTGGCACCCTGCCC
ATGGAGATGCGCCACGATGCGCTGGCCGGCGCCGCGGACATGATCCTCGCGCTGGAACGTCTGGCGAAGGCCACGCCGGG
CCTTGTCGCGACCGTGGGTACGCTCACCATCCCCGGCGGCGCGGTGAATGTGGTGCCGGGCCGGGTACGCTTTTCCTTCG
ACGTGCGCGCCCCCGACGACCGGACCCGTCTCGACGCGCTCGACACCATGCGCGCGACCCTCGCGGAGATCGCCGCTGCG
CGGGGCCTCGCAACCACCCTTGAAGAGACCTATGACGCGCCCGCGGCCCCCTGCGACGGCGCGCTTCAGGCGGCGCTTGC
GGCGGCGGTGGCGGCGGAGGGCATCGATGCCCTGCACCTGCCTTCAGGCGCCGGACACGACGGGCTGTCGCTCAATGGCG
TCATGCCCATCGCCATGCTGTTCGTGCGCTCGCGCAACGGCAGCCACAATCCCCGCGAACATGCGAGCGCCGAGGACATC
GGCGCCGCCGCCCGCGTGCTCAGCCGCTTCGTGCGCGGCTATACGCCGGGCGGCTGA

Upstream 100 bases:

>100_bases
TGGCCCATGACGTTGCCGCCGAGCATGCGGAAGCCCTCGCCCAGATCGAGCGCATCTGCCTGCTGCGCCTCCAGCAGATC
CTGCCGTCGCGGGGCGCCGC

Downstream 100 bases:

>100_bases
CGCCCGCCGCTCAGTCCGCCCCGACGAGACGGTTCTGGGCGTCGAAGAAGGGATAGGGCCCATCGAAGGGGCCGACGAAG
CTGGTGTGCGAGACGATCCG

Product: amidase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MMSVATESSATDVLEGSRLLARLEALARFTDVPGEMTRLTLSPAHKAAAAEVARWFAAAGMAVHLDATGSVVGRYEGTQP
DAPALILGSHIDTVRNAGIFDGNLGVVVALAVVEQLHADGVRLPFALEVHAFADEEGVRFPSTLTSSRALAGRFDAAALD
ATDADGITRREALKAFGVDPEAYAACSRAGRALGYVEVHIEQGPVLEAKGLPVGIVTAIAGATRGTIELVGEAGHSGTLP
MEMRHDALAGAADMILALERLAKATPGLVATVGTLTIPGGAVNVVPGRVRFSFDVRAPDDRTRLDALDTMRATLAEIAAA
RGLATTLEETYDAPAAPCDGALQAALAAAVAAEGIDALHLPSGAGHDGLSLNGVMPIAMLFVRSRNGSHNPREHASAEDI
GAAARVLSRFVRGYTPGG

Sequences:

>Translated_418_residues
MMSVATESSATDVLEGSRLLARLEALARFTDVPGEMTRLTLSPAHKAAAAEVARWFAAAGMAVHLDATGSVVGRYEGTQP
DAPALILGSHIDTVRNAGIFDGNLGVVVALAVVEQLHADGVRLPFALEVHAFADEEGVRFPSTLTSSRALAGRFDAAALD
ATDADGITRREALKAFGVDPEAYAACSRAGRALGYVEVHIEQGPVLEAKGLPVGIVTAIAGATRGTIELVGEAGHSGTLP
MEMRHDALAGAADMILALERLAKATPGLVATVGTLTIPGGAVNVVPGRVRFSFDVRAPDDRTRLDALDTMRATLAEIAAA
RGLATTLEETYDAPAAPCDGALQAALAAAVAAEGIDALHLPSGAGHDGLSLNGVMPIAMLFVRSRNGSHNPREHASAEDI
GAAARVLSRFVRGYTPGG
>Mature_418_residues
MMSVATESSATDVLEGSRLLARLEALARFTDVPGEMTRLTLSPAHKAAAAEVARWFAAAGMAVHLDATGSVVGRYEGTQP
DAPALILGSHIDTVRNAGIFDGNLGVVVALAVVEQLHADGVRLPFALEVHAFADEEGVRFPSTLTSSRALAGRFDAAALD
ATDADGITRREALKAFGVDPEAYAACSRAGRALGYVEVHIEQGPVLEAKGLPVGIVTAIAGATRGTIELVGEAGHSGTLP
MEMRHDALAGAADMILALERLAKATPGLVATVGTLTIPGGAVNVVPGRVRFSFDVRAPDDRTRLDALDTMRATLAEIAAA
RGLATTLEETYDAPAAPCDGALQAALAAAVAAEGIDALHLPSGAGHDGLSLNGVMPIAMLFVRSRNGSHNPREHASAEDI
GAAARVLSRFVRGYTPGG

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=391, Percent_Identity=32.2250639386189, Blast_Score=182, Evalue=4e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 42993; Mature: 42993

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSVATESSATDVLEGSRLLARLEALARFTDVPGEMTRLTLSPAHKAAAAEVARWFAAAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECHHHHHHHHHHHHHHHHCC
MAVHLDATGSVVGRYEGTQPDAPALILGSHIDTVRNAGIFDGNLGVVVALAVVEQLHADG
CEEEEECCCCEEECCCCCCCCCCEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
VRLPFALEVHAFADEEGVRFPSTLTSSRALAGRFDAAALDATDADGITRREALKAFGVDP
CCCCEEEEEEEECCCCCCCCCCHHHHCHHHHCCCCHHCCCCCCCCCCHHHHHHHHHCCCH
EAYAACSRAGRALGYVEVHIEQGPVLEAKGLPVGIVTAIAGATRGTIELVGEAGHSGTLP
HHHHHHHHHCCEEEEEEEEECCCCEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCCCCC
MEMRHDALAGAADMILALERLAKATPGLVATVGTLTIPGGAVNVVPGRVRFSFDVRAPDD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCEEEEEEECCCCCC
RTRLDALDTMRATLAEIAAARGLATTLEETYDAPAAPCDGALQAALAAAVAAEGIDALHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEC
PSGAGHDGLSLNGVMPIAMLFVRSRNGSHNPREHASAEDIGAAARVLSRFVRGYTPGG
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMSVATESSATDVLEGSRLLARLEALARFTDVPGEMTRLTLSPAHKAAAAEVARWFAAAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEECHHHHHHHHHHHHHHHHCC
MAVHLDATGSVVGRYEGTQPDAPALILGSHIDTVRNAGIFDGNLGVVVALAVVEQLHADG
CEEEEECCCCEEECCCCCCCCCCEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
VRLPFALEVHAFADEEGVRFPSTLTSSRALAGRFDAAALDATDADGITRREALKAFGVDP
CCCCEEEEEEEECCCCCCCCCCHHHHCHHHHCCCCHHCCCCCCCCCCHHHHHHHHHCCCH
EAYAACSRAGRALGYVEVHIEQGPVLEAKGLPVGIVTAIAGATRGTIELVGEAGHSGTLP
HHHHHHHHHCCEEEEEEEEECCCCEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCCCCC
MEMRHDALAGAADMILALERLAKATPGLVATVGTLTIPGGAVNVVPGRVRFSFDVRAPDD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCEEEECCCEEEEEEECCCCCC
RTRLDALDTMRATLAEIAAARGLATTLEETYDAPAAPCDGALQAALAAAVAAEGIDALHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEC
PSGAGHDGLSLNGVMPIAMLFVRSRNGSHNPREHASAEDIGAAARVLSRFVRGYTPGG
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]