| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is gsiB [H]
Identifier: 158422401
GI number: 158422401
Start: 879059
End: 880690
Strand: Reverse
Name: gsiB [H]
Synonym: AZC_0777
Alternate gene names: 158422401
Gene position: 880690-879059 (Counterclockwise)
Preceding gene: 158422411
Following gene: 158422400
Centisome position: 16.4
GC content: 62.38
Gene sequence:
>1632_bases ATGGCCCGTGGATTGCATACAATGTTTGGCATTATGATGGGCCGTCCTGATCGGCCGCAGCGCGGCGCGTGCGCGCCATC TCCCTGCAACCGGGCCCGATTTCGGCCCAAGAAGGATCCATTGCCCATGTGGAAGCGGACTCTGGCCACCCTCGTCCTGA GCACGGGACTGGCCACGGGACTGGCAGCGAGCGTTGAGGCGCAGACGCTCCGGTTCGGCCTCATGGAAGATCCCGATGCC CTCGATCCCACGCTCGCCCGCACCTTCAGCGGCCGCATGGTGTTCGCGGCGCTGTGCGACAAGCTGGTGGATATTGATGC CAAGCTGAACATCATTCCGCAGCTCGCCACCGAATGGTCCTGGTCGCCCGACCAGAAGACGCTGACCATGAAGATCCGCG ACGGCGTGCTGTTCCAGGATGGCGAGAAGCTCGACGCCGAGGCGGTGAAGTTCAATCTGGAACGCCACCTCAAGATGCAG GGCTCGCAGCGCCGCGGCGAAATCGCCGCCATCGACAGCGTCGAGGTGGTGGACCCGCTGACCGTCAAGATCAACCTGAA GACGCCCTTTGCGCCGCTGCTCGCGCAGTTCACCGATCGCGCCGGCATGATGGTCTCGCCCAAGGCGGCACAGGCGCTCG GCGACAAGTTCGCCTCAGCGCCCGTCTGCGCCGGTCCGTTCAAGTTCGTGGAGCGCGTGGCGCAGGACCGGATCGTTGTC GAGAAATTCGACAATTACTGGAACAAGGACAACATCTTCCTCAAGCGCATCGAGTTCAAGGTCATCCCGGACACGACCGT GCGCCTGACCAACCTGCGCTCGGGCCAACTCGACCTTCTGGAGCGGCTCGCCCCCACCGACCTGCCGCAGGTGCAAAGCG ACAGCAAGCTTAAGATCGGCATGGCCTACGAGCTCGGCTACCAGACGCTGCTGCTCAATCTTTCCAAAGACGGCCCCCTC GCCAAGAACGCCAAGGTGCGTGAGGCTCTGGAGCTCTCCATCGATCGCGACGCCATCAACCAGGTGGTGTTCAACGGCGA GTTCCTGCCGGGCAACCAGTGGGTGAATCCCAAGAACCCGAACTATGTCTCGGCCTTCCCCATCCCCAAGCGCGACGTGG CGAAAGCCAAGGCGCTGCTGAAGGAGGCGGGGGTCACCACGCCGCTGGTCGTGAACTTCACCGTCTTCTCCGACAATCTC TCGCAGCAGTCGGCGCAGGTGATCCAGGCCATGGCCAAGGAGGCGGGCTTTGATCTCAAGATCCAGGCCACCGATTTCGG CACCGCCCTCAATCTGGCTGATCAGGGCAATTATGACCTCATGCTCTACAACTGGAGCGGCCGGCCCGATCCGGACGGCA ACACCTACAACTTCCTGGCCACCAAAGCACCGCTGAACTATCCGCGCTATTCCAACGAGAAGGCGGATGCGGCCTTCCAG GCCGAACGGCAGAATAATGATCCGGAAGTCCGCAAGGCCGCCTGGAAGGATCTCGCCACGCAGGTGCTGGCCGACCGTCC ACTGATCTATCTCTACCACCGCAAGCTGTTGTGGGCCTACTCCACCAAGCTCACGGGCTTCGGCGATTATCCGGACGGTC TTGTGCGCTTCACGGGACTCAAGCTGAACTGA
Upstream 100 bases:
>100_bases GGCGTTCCCATGCAACAATCCACAGCATGACGCTGCATTGGCGTGCAAACGATCCTGTTCCCGGAGAGAAACCCTGGGAG CGGGCATCGGGGAATATGCG
Downstream 100 bases:
>100_bases CCGTGACCGCCCCCGCCCGACGCCGGCGGGGGCGCCGCTGCTGATCCTGAAATAAAATAGAACCTCCAGAGGACAGGCCA TGTGGAAGCAGTTTTTTGCG
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MARGLHTMFGIMMGRPDRPQRGACAPSPCNRARFRPKKDPLPMWKRTLATLVLSTGLATGLAASVEAQTLRFGLMEDPDA LDPTLARTFSGRMVFAALCDKLVDIDAKLNIIPQLATEWSWSPDQKTLTMKIRDGVLFQDGEKLDAEAVKFNLERHLKMQ GSQRRGEIAAIDSVEVVDPLTVKINLKTPFAPLLAQFTDRAGMMVSPKAAQALGDKFASAPVCAGPFKFVERVAQDRIVV EKFDNYWNKDNIFLKRIEFKVIPDTTVRLTNLRSGQLDLLERLAPTDLPQVQSDSKLKIGMAYELGYQTLLLNLSKDGPL AKNAKVREALELSIDRDAINQVVFNGEFLPGNQWVNPKNPNYVSAFPIPKRDVAKAKALLKEAGVTTPLVVNFTVFSDNL SQQSAQVIQAMAKEAGFDLKIQATDFGTALNLADQGNYDLMLYNWSGRPDPDGNTYNFLATKAPLNYPRYSNEKADAAFQ AERQNNDPEVRKAAWKDLATQVLADRPLIYLYHRKLLWAYSTKLTGFGDYPDGLVRFTGLKLN
Sequences:
>Translated_543_residues MARGLHTMFGIMMGRPDRPQRGACAPSPCNRARFRPKKDPLPMWKRTLATLVLSTGLATGLAASVEAQTLRFGLMEDPDA LDPTLARTFSGRMVFAALCDKLVDIDAKLNIIPQLATEWSWSPDQKTLTMKIRDGVLFQDGEKLDAEAVKFNLERHLKMQ GSQRRGEIAAIDSVEVVDPLTVKINLKTPFAPLLAQFTDRAGMMVSPKAAQALGDKFASAPVCAGPFKFVERVAQDRIVV EKFDNYWNKDNIFLKRIEFKVIPDTTVRLTNLRSGQLDLLERLAPTDLPQVQSDSKLKIGMAYELGYQTLLLNLSKDGPL AKNAKVREALELSIDRDAINQVVFNGEFLPGNQWVNPKNPNYVSAFPIPKRDVAKAKALLKEAGVTTPLVVNFTVFSDNL SQQSAQVIQAMAKEAGFDLKIQATDFGTALNLADQGNYDLMLYNWSGRPDPDGNTYNFLATKAPLNYPRYSNEKADAAFQ AERQNNDPEVRKAAWKDLATQVLADRPLIYLYHRKLLWAYSTKLTGFGDYPDGLVRFTGLKLN >Mature_542_residues ARGLHTMFGIMMGRPDRPQRGACAPSPCNRARFRPKKDPLPMWKRTLATLVLSTGLATGLAASVEAQTLRFGLMEDPDAL DPTLARTFSGRMVFAALCDKLVDIDAKLNIIPQLATEWSWSPDQKTLTMKIRDGVLFQDGEKLDAEAVKFNLERHLKMQG SQRRGEIAAIDSVEVVDPLTVKINLKTPFAPLLAQFTDRAGMMVSPKAAQALGDKFASAPVCAGPFKFVERVAQDRIVVE KFDNYWNKDNIFLKRIEFKVIPDTTVRLTNLRSGQLDLLERLAPTDLPQVQSDSKLKIGMAYELGYQTLLLNLSKDGPLA KNAKVREALELSIDRDAINQVVFNGEFLPGNQWVNPKNPNYVSAFPIPKRDVAKAKALLKEAGVTTPLVVNFTVFSDNLS QQSAQVIQAMAKEAGFDLKIQATDFGTALNLADQGNYDLMLYNWSGRPDPDGNTYNFLATKAPLNYPRYSNEKADAAFQA ERQNNDPEVRKAAWKDLATQVLADRPLIYLYHRKLLWAYSTKLTGFGDYPDGLVRFTGLKLN
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=507, Percent_Identity=28.2051282051282, Blast_Score=151, Evalue=1e-37, Organism=Escherichia coli, GI1789966, Length=524, Percent_Identity=25.1908396946565, Blast_Score=141, Evalue=8e-35, Organism=Escherichia coli, GI1787762, Length=509, Percent_Identity=25.9332023575639, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1789887, Length=496, Percent_Identity=26.008064516129, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI87081878, Length=480, Percent_Identity=22.7083333333333, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1787495, Length=515, Percent_Identity=23.3009708737864, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI1789397, Length=522, Percent_Identity=22.9885057471264, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1787551, Length=550, Percent_Identity=21.8181818181818, Blast_Score=80, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 60504; Mature: 60373
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARGLHTMFGIMMGRPDRPQRGACAPSPCNRARFRPKKDPLPMWKRTLATLVLSTGLATG CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LAASVEAQTLRFGLMEDPDALDPTLARTFSGRMVFAALCDKLVDIDAKLNIIPQLATEWS HHHHCCHHHHEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHCCC WSPDQKTLTMKIRDGVLFQDGEKLDAEAVKFNLERHLKMQGSQRRGEIAAIDSVEVVDPL CCCCCEEEEEEEECCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCE TVKINLKTPFAPLLAQFTDRAGMMVSPKAAQALGDKFASAPVCAGPFKFVERVAQDRIVV EEEEEECCCHHHHHHHHHHCCCCEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHH EKFDNYWNKDNIFLKRIEFKVIPDTTVRLTNLRSGQLDLLERLAPTDLPQVQSDSKLKIG HHHHCCCCCCCEEEEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEE MAYELGYQTLLLNLSKDGPLAKNAKVREALELSIDRDAINQVVFNGEFLPGNQWVNPKNP EEEHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHEEECCEECCCCCCCCCCCC NYVSAFPIPKRDVAKAKALLKEAGVTTPLVVNFTVFSDNLSQQSAQVIQAMAKEAGFDLK CEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEE IQATDFGTALNLADQGNYDLMLYNWSGRPDPDGNTYNFLATKAPLNYPRYSNEKADAAFQ EEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHH AERQNNDPEVRKAAWKDLATQVLADRPLIYLYHRKLLWAYSTKLTGFGDYPDGLVRFTGL HHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEECE KLN EEC >Mature Secondary Structure ARGLHTMFGIMMGRPDRPQRGACAPSPCNRARFRPKKDPLPMWKRTLATLVLSTGLATG CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LAASVEAQTLRFGLMEDPDALDPTLARTFSGRMVFAALCDKLVDIDAKLNIIPQLATEWS HHHHCCHHHHEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHHHHHHCCC WSPDQKTLTMKIRDGVLFQDGEKLDAEAVKFNLERHLKMQGSQRRGEIAAIDSVEVVDPL CCCCCEEEEEEEECCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEECCE TVKINLKTPFAPLLAQFTDRAGMMVSPKAAQALGDKFASAPVCAGPFKFVERVAQDRIVV EEEEEECCCHHHHHHHHHHCCCCEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHH EKFDNYWNKDNIFLKRIEFKVIPDTTVRLTNLRSGQLDLLERLAPTDLPQVQSDSKLKIG HHHHCCCCCCCEEEEEEEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEE MAYELGYQTLLLNLSKDGPLAKNAKVREALELSIDRDAINQVVFNGEFLPGNQWVNPKNP EEEHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHEEECCEECCCCCCCCCCCC NYVSAFPIPKRDVAKAKALLKEAGVTTPLVVNFTVFSDNLSQQSAQVIQAMAKEAGFDLK CEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEE IQATDFGTALNLADQGNYDLMLYNWSGRPDPDGNTYNFLATKAPLNYPRYSNEKADAAFQ EEEECCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHH AERQNNDPEVRKAAWKDLATQVLADRPLIYLYHRKLLWAYSTKLTGFGDYPDGLVRFTGL HHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEECE KLN EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA