| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158422406
Identifier: 158422406
GI number: 158422406
Start: 883585
End: 884592
Strand: Direct
Name: 158422406
Synonym: AZC_0782
Alternate gene names: NA
Gene position: 883585-884592 (Clockwise)
Preceding gene: 158422405
Following gene: 158422407
Centisome position: 16.45
GC content: 64.29
Gene sequence:
>1008_bases ATGAAGTCCCTGCTCACGACCGTTCTGCTCGCCACCGGGCTTTCGCTCGGCGCGGCGTCGGCCGCTTCGGCCGCCGATGC CATCTGCTACAACTGCCCGCCCGAATGGGCCGACTGGGGCTCCATGCTCAAGGCCATCAAGGCCGACACGGGCGTCGAGG TGCCGCCGGACAACAAGAATTCCGGCCAGGCCATGGCCCAGATGATCGCCGAGAAGGCGAGCCCGGTGGCCGATGTCGCC TATCTCGGCGTCACCTTCGGCATCAAGGTCAAGGATGCCGGCCTCACTCAGGCTTACAAGCCCAAGGGCTTTGACGAGAT TCCCGCCGGCCTCAAGGACGCGGACGGCCACTGGTTCACCATCCACTCCGGCACGCTCGGCCTGTTCGTGAACAAGGATG CCCTCGGCGGCGCGCCGGTCCCGGCCTGCTGGAGCGATCTCCTGAAGCCCGAATACAAGGGCATGGTGGGGTATCTCGAC CCCTCCAGCGCCTTCGTGGGCTATGTGGGCGCGGTGGCGGTGAATACCGGCCTCGGCGGCTCGCTCGACAATTTCTCGCC GGCGATCGACTTCTTCAAGAAGCTTCAGGCCAACCAGCCCATCGTGCCGAAGCAGACGTCCTACGCACGCGTCGTTTCGG GCGAGATCCCGATCCTGTTCGATTATGACTTCAACGCCTATCGCGCCAAGTACACGGAGAAGGGCAACTTCGCCTTCGTG ATCCCGTGCGAGGGCACCGTGGTGGTGCCTTACGTGATGAGCATGGTGAAGAACGACCCGCATCCGGAAGCGGCGAAGAA GGTTCTCGACTACGTGCTCTCGGACAAGGGGCAGGCCATGTGGGCCAAGGCCTATCTGCGCCCCGCGCGCAACGTGGAAC TGCCGAAGGAGGTCGCCGACCGCTTCCTCCCCGCCGCCGACTACGCCCGCGCCAAGGCGGTGGACTACGGCAAAATGGAG ACCGTGCAGAAGGGCTTCTCGGACAAGTATCTCTCCGAGGTGAAGTGA
Upstream 100 bases:
>100_bases GCACGCTCGCCCCCGCGCCGCATCTGCCGCCGGCCGCCCCCAAGGGGCGGCGCGCCGCTACCCCTTCACCCCGCCAAACC GCCTCAGGAAAGGCTCTGCG
Downstream 100 bases:
>100_bases GGCGCGGGAGCGCATCCTGTCGCGAACACCCTCCCCCTTGTGGGGGAGGGCTGGGGAGGGGGGTAATGCCCTCTCCGACT ATGCGTCTTTGGCTGCGGAG
Product: substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKSLLTTVLLATGLSLGAASAASAADAICYNCPPEWADWGSMLKAIKADTGVEVPPDNKNSGQAMAQMIAEKASPVADVA YLGVTFGIKVKDAGLTQAYKPKGFDEIPAGLKDADGHWFTIHSGTLGLFVNKDALGGAPVPACWSDLLKPEYKGMVGYLD PSSAFVGYVGAVAVNTGLGGSLDNFSPAIDFFKKLQANQPIVPKQTSYARVVSGEIPILFDYDFNAYRAKYTEKGNFAFV IPCEGTVVVPYVMSMVKNDPHPEAAKKVLDYVLSDKGQAMWAKAYLRPARNVELPKEVADRFLPAADYARAKAVDYGKME TVQKGFSDKYLSEVK
Sequences:
>Translated_335_residues MKSLLTTVLLATGLSLGAASAASAADAICYNCPPEWADWGSMLKAIKADTGVEVPPDNKNSGQAMAQMIAEKASPVADVA YLGVTFGIKVKDAGLTQAYKPKGFDEIPAGLKDADGHWFTIHSGTLGLFVNKDALGGAPVPACWSDLLKPEYKGMVGYLD PSSAFVGYVGAVAVNTGLGGSLDNFSPAIDFFKKLQANQPIVPKQTSYARVVSGEIPILFDYDFNAYRAKYTEKGNFAFV IPCEGTVVVPYVMSMVKNDPHPEAAKKVLDYVLSDKGQAMWAKAYLRPARNVELPKEVADRFLPAADYARAKAVDYGKME TVQKGFSDKYLSEVK >Mature_335_residues MKSLLTTVLLATGLSLGAASAASAADAICYNCPPEWADWGSMLKAIKADTGVEVPPDNKNSGQAMAQMIAEKASPVADVA YLGVTFGIKVKDAGLTQAYKPKGFDEIPAGLKDADGHWFTIHSGTLGLFVNKDALGGAPVPACWSDLLKPEYKGMVGYLD PSSAFVGYVGAVAVNTGLGGSLDNFSPAIDFFKKLQANQPIVPKQTSYARVVSGEIPILFDYDFNAYRAKYTEKGNFAFV IPCEGTVVVPYVMSMVKNDPHPEAAKKVLDYVLSDKGQAMWAKAYLRPARNVELPKEVADRFLPAADYARAKAVDYGKME TVQKGFSDKYLSEVK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 35947; Mature: 35947
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLLTTVLLATGLSLGAASAASAADAICYNCPPEWADWGSMLKAIKADTGVEVPPDNKN CHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCC SGQAMAQMIAEKASPVADVAYLGVTFGIKVKDAGLTQAYKPKGFDEIPAGLKDADGHWFT HHHHHHHHHHHHCCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCEEE IHSGTLGLFVNKDALGGAPVPACWSDLLKPEYKGMVGYLDPSSAFVGYVGAVAVNTGLGG EECCEEEEEEECCCCCCCCCHHHHHHHHCHHHCCEEEEECCCHHHHHHHHHHEEECCCCC SLDNFSPAIDFFKKLQANQPIVPKQTSYARVVSGEIPILFDYDFNAYRAKYTEKGNFAFV CCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEECCCCHHEEEEECCCCEEEE IPCEGTVVVPYVMSMVKNDPHPEAAKKVLDYVLSDKGQAMWAKAYLRPARNVELPKEVAD EECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHH RFLPAADYARAKAVDYGKMETVQKGFSDKYLSEVK HCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MKSLLTTVLLATGLSLGAASAASAADAICYNCPPEWADWGSMLKAIKADTGVEVPPDNKN CHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCC SGQAMAQMIAEKASPVADVAYLGVTFGIKVKDAGLTQAYKPKGFDEIPAGLKDADGHWFT HHHHHHHHHHHHCCCHHHHHHHHEEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCCEEE IHSGTLGLFVNKDALGGAPVPACWSDLLKPEYKGMVGYLDPSSAFVGYVGAVAVNTGLGG EECCEEEEEEECCCCCCCCCHHHHHHHHCHHHCCEEEEECCCHHHHHHHHHHEEECCCCC SLDNFSPAIDFFKKLQANQPIVPKQTSYARVVSGEIPILFDYDFNAYRAKYTEKGNFAFV CCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEECCCCHHEEEEECCCCEEEE IPCEGTVVVPYVMSMVKNDPHPEAAKKVLDYVLSDKGQAMWAKAYLRPARNVELPKEVAD EECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHH RFLPAADYARAKAVDYGKMETVQKGFSDKYLSEVK HCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]