| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is cysU [H]
Identifier: 158422407
GI number: 158422407
Start: 884905
End: 885732
Strand: Direct
Name: cysU [H]
Synonym: AZC_0783
Alternate gene names: 158422407
Gene position: 884905-885732 (Clockwise)
Preceding gene: 158422406
Following gene: 158422408
Centisome position: 16.48
GC content: 68.36
Gene sequence:
>828_bases GTGAAAGCCATGCCCAGCGCAGATCGTCTGGCCCGTCTGTTCCTCTTGCCGCTCGGCCTGTTCGTGCTGGCCTTCTTCCT GCTGCCCATGGCGCGGCTCGTGGCCGTCGCGGGCTCGGGTCCCAACGGGTTGGGCGAATATCTGGTGCTTGTCACCAGCC CGCGCCATTTCTCCACTCTCATCGCGACGCTGGTCCTTTCCGCCACCGCGACGCTGGCGACGCTCGCCATCGGCGTCGTG GTGGCCCTGTTCCTCGGTCGCACGCGCTTTCCGGGGCAGAACATCCTGATCGCAATGCTCACCTTGCCGCTCGCCTTTCC CGGCGTGGTGGTGGGCTTCATGATCATCCTGCTCGCCGGCCGGCAGGGCCTCATCGGCGGCTGGACGCAGGCGCTCGGCA TGGGGCGGCTGGTGTTCGCCTATTCCATGGCCGGCCTGTTCGCGGGCTATGTCTATTTCTCGCTGCCGCGGGTGATGGTG ACGCTGCTCGCCGCGGTGGAGAAGCTCGATCCGGCGCTGGAGGAGGCCGCCCGCTCGCTCGGCGCGAGTCGGGTGCAGGT GCTGCGGGATGTGATCCTGCCCGGCATCGCGCCCTCGCTCATGGCCTCCGGCGCCATCGCCTTCGCCACCGCCATGGGCG CCTTCGGCACCGCATTTACGCTCGCCACCCGCATCGATGTGCTGGCCATGACCATCTATACGGAGTTTACGCTCAACGCG AACATCGCCAGCGCGGCGGCGCTCTCCATCGCGCTCGGCCTCATCACCTGGCTGGTGCTGGCGGCGACACGCAATCTCGC GGGTGACCGCGTGGCGGCGGCGGGGTGA
Upstream 100 bases:
>100_bases TGTGGGCTGCCCAGCGTATCCGCGACCGCCTGCCGCCGCCTTCCCTTGAGCAAGCCTTCAACCCGTCCGCCGGCGTGCCG CGCGCCGGCACCTTCGCAAA
Downstream 100 bases:
>100_bases GGCCGATGAAACGCTCCCCTCTCGTTTTCGCCCTGCAACTCGTTATCACGCTGCTCGCCACGGCCTTCCTGGTGGTGCCG GCGGGCACCTCCATCCTTGC
Product: permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKAMPSADRLARLFLLPLGLFVLAFFLLPMARLVAVAGSGPNGLGEYLVLVTSPRHFSTLIATLVLSATATLATLAIGVV VALFLGRTRFPGQNILIAMLTLPLAFPGVVVGFMIILLAGRQGLIGGWTQALGMGRLVFAYSMAGLFAGYVYFSLPRVMV TLLAAVEKLDPALEEAARSLGASRVQVLRDVILPGIAPSLMASGAIAFATAMGAFGTAFTLATRIDVLAMTIYTEFTLNA NIASAAALSIALGLITWLVLAATRNLAGDRVAAAG
Sequences:
>Translated_275_residues MKAMPSADRLARLFLLPLGLFVLAFFLLPMARLVAVAGSGPNGLGEYLVLVTSPRHFSTLIATLVLSATATLATLAIGVV VALFLGRTRFPGQNILIAMLTLPLAFPGVVVGFMIILLAGRQGLIGGWTQALGMGRLVFAYSMAGLFAGYVYFSLPRVMV TLLAAVEKLDPALEEAARSLGASRVQVLRDVILPGIAPSLMASGAIAFATAMGAFGTAFTLATRIDVLAMTIYTEFTLNA NIASAAALSIALGLITWLVLAATRNLAGDRVAAAG >Mature_275_residues MKAMPSADRLARLFLLPLGLFVLAFFLLPMARLVAVAGSGPNGLGEYLVLVTSPRHFSTLIATLVLSATATLATLAIGVV VALFLGRTRFPGQNILIAMLTLPLAFPGVVVGFMIILLAGRQGLIGGWTQALGMGRLVFAYSMAGLFAGYVYFSLPRVMV TLLAAVEKLDPALEEAARSLGASRVQVLRDVILPGIAPSLMASGAIAFATAMGAFGTAFTLATRIDVLAMTIYTEFTLNA NIASAAALSIALGLITWLVLAATRNLAGDRVAAAG
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=192, Percent_Identity=31.25, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI87082099, Length=206, Percent_Identity=31.0679611650485, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786980, Length=229, Percent_Identity=31.8777292576419, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787369, Length=167, Percent_Identity=29.940119760479, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786254, Length=190, Percent_Identity=27.3684210526316, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1787570, Length=242, Percent_Identity=27.6859504132231, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1787368, Length=203, Percent_Identity=27.5862068965517, Blast_Score=61, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28568; Mature: 28568
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAMPSADRLARLFLLPLGLFVLAFFLLPMARLVAVAGSGPNGLGEYLVLVTSPRHFSTL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHH IATLVLSATATLATLAIGVVVALFLGRTRFPGQNILIAMLTLPLAFPGVVVGFMIILLAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC RQGLIGGWTQALGMGRLVFAYSMAGLFAGYVYFSLPRVMVTLLAAVEKLDPALEEAARSL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH GASRVQVLRDVILPGIAPSLMASGAIAFATAMGAFGTAFTLATRIDVLAMTIYTEFTLNA CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC NIASAAALSIALGLITWLVLAATRNLAGDRVAAAG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKAMPSADRLARLFLLPLGLFVLAFFLLPMARLVAVAGSGPNGLGEYLVLVTSPRHFSTL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHH IATLVLSATATLATLAIGVVVALFLGRTRFPGQNILIAMLTLPLAFPGVVVGFMIILLAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC RQGLIGGWTQALGMGRLVFAYSMAGLFAGYVYFSLPRVMVTLLAAVEKLDPALEEAARSL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH GASRVQVLRDVILPGIAPSLMASGAIAFATAMGAFGTAFTLATRIDVLAMTIYTEFTLNA CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC NIASAAALSIALGLITWLVLAATRNLAGDRVAAAG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]