| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is yrpG [H]
Identifier: 158422202
GI number: 158422202
Start: 641242
End: 642192
Strand: Reverse
Name: yrpG [H]
Synonym: AZC_0578
Alternate gene names: 158422202
Gene position: 642192-641242 (Counterclockwise)
Preceding gene: 158422203
Following gene: 158422198
Centisome position: 11.96
GC content: 67.61
Gene sequence:
>951_bases ATGCAGCACCGCCCCCTCGGCCGCAGCGGCCTTTCCATCGCCCCGCTCGTTCTCGGCACCAATGTCTTCGGCTGGACCGC CGACGAAGCGACCAGCTTCCGCCTGCTGGATGCCTTCGTCGACGCAGGCTTGAATGCGCTCGACACCGCAGACATCTATT CGCGCTGGGTGCCTGGCCACAGTGGCGGGGAGTCCGAGACAATCATCGGCAAGTGGCTCGCCGCCAATCCGGCCAAGCGG GACAAGGTGCTCATCTTCACCAAGGTGGGCATGGACCACGGGCCGGATCGCAACGGCCTGTCACCCCGCTGGATCCGCCA GTCCGTTGAGGAATCGCTGAAGCGCCTCCAGGTGGAGCAGATCGACCTCCACCAGTCACACACGCCGGACGCCGCGACGC CCGACGCGGAAACGCTCGGTGCTTATCAGGAGCTGATGCGGGCGGGAAAGATCCGCGCCATCGGCGCCTCCAATTATTCG GCCGAGCAGCTGGGCGCCGCGCTGGCGGTGGCCGCAGAACTGGGGCTGCCGCGCTATGAGACGCTGCAGCCACTCTACAA TCTCTACGACCGCGCCAGTTATGACGGCGCGCTGCGCGATCTCTGCATGCGCGAGGACATCGGCGTCATCCCCTTCTATG GGCTGGCAGCCGGCTTCCTCACAGGCAAGTACCGCTCGGAAGCGGATTTCGGCAAAAGCGCGCGCGGCGGCAAGATGGCG AATTACCTGAACCCGCGCGGCCTGCGCATCCTCGCCGCCCTCGATGAGGTAGCGGCGGCAAAGGGCGCGGCCCCAGGCGA GGTGGCCCTCGCCTGGCTCATCGCGCGGCCCGGCGTCACCGCGCCGATCGCCAGCGCTACCAGCCTCGCGCAGATGGACG GGCTCATCCGTGCCGTCCATCTCCAGTTATCGGCGGAGGAGATCGCCGCGCTCGACGCGGCGAGCGCCTGA
Upstream 100 bases:
>100_bases CCCTCCACCTGCACGGACCCGCACGCAGCCCTCGCGACCGGCCGTAACGGCCACGAAGGAGGCTTGGCCCAGGGCCCGCC CGGACAGCACGGCTCGACGC
Downstream 100 bases:
>100_bases GGGATCCCCGCGTCAGGCCGTGCGGGCGCGGATCCACTCGATGATGCCGGAGAAATCCCGGCCCGCATTGCCTTCCGCCT CGAAGGCAGAATAGAGGGCA
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MQHRPLGRSGLSIAPLVLGTNVFGWTADEATSFRLLDAFVDAGLNALDTADIYSRWVPGHSGGESETIIGKWLAANPAKR DKVLIFTKVGMDHGPDRNGLSPRWIRQSVEESLKRLQVEQIDLHQSHTPDAATPDAETLGAYQELMRAGKIRAIGASNYS AEQLGAALAVAAELGLPRYETLQPLYNLYDRASYDGALRDLCMREDIGVIPFYGLAAGFLTGKYRSEADFGKSARGGKMA NYLNPRGLRILAALDEVAAAKGAAPGEVALAWLIARPGVTAPIASATSLAQMDGLIRAVHLQLSAEEIAALDAASA
Sequences:
>Translated_316_residues MQHRPLGRSGLSIAPLVLGTNVFGWTADEATSFRLLDAFVDAGLNALDTADIYSRWVPGHSGGESETIIGKWLAANPAKR DKVLIFTKVGMDHGPDRNGLSPRWIRQSVEESLKRLQVEQIDLHQSHTPDAATPDAETLGAYQELMRAGKIRAIGASNYS AEQLGAALAVAAELGLPRYETLQPLYNLYDRASYDGALRDLCMREDIGVIPFYGLAAGFLTGKYRSEADFGKSARGGKMA NYLNPRGLRILAALDEVAAAKGAAPGEVALAWLIARPGVTAPIASATSLAQMDGLIRAVHLQLSAEEIAALDAASA >Mature_316_residues MQHRPLGRSGLSIAPLVLGTNVFGWTADEATSFRLLDAFVDAGLNALDTADIYSRWVPGHSGGESETIIGKWLAANPAKR DKVLIFTKVGMDHGPDRNGLSPRWIRQSVEESLKRLQVEQIDLHQSHTPDAATPDAETLGAYQELMRAGKIRAIGASNYS AEQLGAALAVAAELGLPRYETLQPLYNLYDRASYDGALRDLCMREDIGVIPFYGLAAGFLTGKYRSEADFGKSARGGKMA NYLNPRGLRILAALDEVAAAKGAAPGEVALAWLIARPGVTAPIASATSLAQMDGLIRAVHLQLSAEEIAALDAASA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=325, Percent_Identity=28.3076923076923, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI4504825, Length=322, Percent_Identity=27.639751552795, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI27436966, Length=304, Percent_Identity=28.2894736842105, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI27436964, Length=304, Percent_Identity=27.9605263157895, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI27436962, Length=304, Percent_Identity=27.9605263157895, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI41152114, Length=226, Percent_Identity=34.070796460177, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI27436971, Length=323, Percent_Identity=25.3869969040248, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI41327764, Length=227, Percent_Identity=34.3612334801762, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI223718702, Length=221, Percent_Identity=33.0316742081448, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI223718708, Length=180, Percent_Identity=33.8888888888889, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI87081735, Length=322, Percent_Identity=34.472049689441, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1789199, Length=342, Percent_Identity=32.1637426900585, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1789375, Length=323, Percent_Identity=31.5789473684211, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1788070, Length=329, Percent_Identity=29.483282674772, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1787674, Length=307, Percent_Identity=26.7100977198697, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788081, Length=317, Percent_Identity=27.1293375394322, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6325169, Length=335, Percent_Identity=29.8507462686567, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323998, Length=327, Percent_Identity=25.3822629969419, Blast_Score=86, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6319958, Length=300, Percent_Identity=24.3333333333333, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6319951, Length=322, Percent_Identity=22.360248447205, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24644950, Length=314, Percent_Identity=26.1146496815287, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24640980, Length=331, Percent_Identity=24.773413897281, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45549126, Length=329, Percent_Identity=24.0121580547112, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24646159, Length=227, Percent_Identity=29.0748898678414, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 33723; Mature: 33723
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHRPLGRSGLSIAPLVLGTNVFGWTADEATSFRLLDAFVDAGLNALDTADIYSRWVPGH CCCCCCCCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC SGGESETIIGKWLAANPAKRDKVLIFTKVGMDHGPDRNGLSPRWIRQSVEESLKRLQVEQ CCCCCCEEEHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IDLHQSHTPDAATPDAETLGAYQELMRAGKIRAIGASNYSAEQLGAALAVAAELGLPRYE HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHH TLQPLYNLYDRASYDGALRDLCMREDIGVIPFYGLAAGFLTGKYRSEADFGKSARGGKMA HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH NYLNPRGLRILAALDEVAAAKGAAPGEVALAWLIARPGVTAPIASATSLAQMDGLIRAVH HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LQLSAEEIAALDAASA HHCCHHHHHHHHCCCC >Mature Secondary Structure MQHRPLGRSGLSIAPLVLGTNVFGWTADEATSFRLLDAFVDAGLNALDTADIYSRWVPGH CCCCCCCCCCCEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC SGGESETIIGKWLAANPAKRDKVLIFTKVGMDHGPDRNGLSPRWIRQSVEESLKRLQVEQ CCCCCCEEEHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH IDLHQSHTPDAATPDAETLGAYQELMRAGKIRAIGASNYSAEQLGAALAVAAELGLPRYE HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHH TLQPLYNLYDRASYDGALRDLCMREDIGVIPFYGLAAGFLTGKYRSEADFGKSARGGKMA HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH NYLNPRGLRILAALDEVAAAKGAAPGEVALAWLIARPGVTAPIASATSLAQMDGLIRAVH HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LQLSAEEIAALDAASA HHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9308178; 9384377 [H]