| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is thiE [H]
Identifier: 158422124
GI number: 158422124
Start: 557677
End: 558387
Strand: Reverse
Name: thiE [H]
Synonym: AZC_0500
Alternate gene names: 158422124
Gene position: 558387-557677 (Counterclockwise)
Preceding gene: 158422125
Following gene: 158422123
Centisome position: 10.4
GC content: 72.29
Gene sequence:
>711_bases ATGCCATCAGGCCCGGCATCCGAAAGGGCCGGGTGCCCCTCTTTCGCCTGCTTTCTGGCCGAACCCGTCATCATGCCCAC AGAACCGGAAATCCCCCGCTGCCGCCTCATGCTCGTGCTTCCGCCCACCCTGTCGGCGGCGGAAGCCATCGCCTGCATGG GCGCGGGCGATGTCGCAGCGGTGATCGTCACGACCCCCGCCGGGGATGAAACCGCGGCCAAGGCCCAACTCTCGGAGCTC TGCACCGCGACGCAGGCCGCGGGCGTCGCCTTCCTTCTGGCCGACCGGGTGGAGCTGGCCTCCGACATCGGCGCCGACGG CGTTCACCTCGGCAGCTACGCCGCGCTCAAGCGCGCCCTGCCGGCAGTCAAGCCCGGCGGCATCGCCGGCATCGGCCTCG AAGGCCGGCACGAAGCGATGGAAGCGGGCGAAGCGGGCGCGGATTACGTGCTGTTCGGCGCGCGGGACGGCAGCGGCCCC ATCGAGCCGGTGGTCGAACTGGTGAGCTGGTGGGCGGAAGTCTTCGAGGTGCCGTGCGTGGGCGTGGCGACCACGGTGGA GGATGCCCGCGCCATTGCGGTGGCGGGCGCCGATTTCGTGGCGCTGGCGGCCGTGCCCGCCGGTCCGGATGGTCCCGCAC TCGTTGCGGACGTGGAGCGCGCCGTCGCCGCCGTGGACCGCACCGTGGCCGACGCCACGCCCAAGGCCTGA
Upstream 100 bases:
>100_bases CTGATCGGCCCCTTGCGCCTTTATCCGCGTTGAGAGAGCCCGCCGTCCCGCGAGGGACCGGCGGGCTCTTGCGTTCTCCC CCCGGCCCGCCTAGAGCCTG
Downstream 100 bases:
>100_bases GTGGAAAACGCATGATGGATCGCGTGCTTCGTCTCCTGCGCCCGCTGCTTGGCATTGCGGCGGCCTCCGCCCTCAGTGTC GCCCTCGCCTTGCCGGCGGC
Product: thiamine-phosphate pyrophosphorylase precursor
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MPSGPASERAGCPSFACFLAEPVIMPTEPEIPRCRLMLVLPPTLSAAEAIACMGAGDVAAVIVTTPAGDETAAKAQLSEL CTATQAAGVAFLLADRVELASDIGADGVHLGSYAALKRALPAVKPGGIAGIGLEGRHEAMEAGEAGADYVLFGARDGSGP IEPVVELVSWWAEVFEVPCVGVATTVEDARAIAVAGADFVALAAVPAGPDGPALVADVERAVAAVDRTVADATPKA
Sequences:
>Translated_236_residues MPSGPASERAGCPSFACFLAEPVIMPTEPEIPRCRLMLVLPPTLSAAEAIACMGAGDVAAVIVTTPAGDETAAKAQLSEL CTATQAAGVAFLLADRVELASDIGADGVHLGSYAALKRALPAVKPGGIAGIGLEGRHEAMEAGEAGADYVLFGARDGSGP IEPVVELVSWWAEVFEVPCVGVATTVEDARAIAVAGADFVALAAVPAGPDGPALVADVERAVAAVDRTVADATPKA >Mature_235_residues PSGPASERAGCPSFACFLAEPVIMPTEPEIPRCRLMLVLPPTLSAAEAIACMGAGDVAAVIVTTPAGDETAAKAQLSELC TATQAAGVAFLLADRVELASDIGADGVHLGSYAALKRALPAVKPGGIAGIGLEGRHEAMEAGEAGADYVLFGARDGSGPI EPVVELVSWWAEVFEVPCVGVATTVEDARAIAVAGADFVALAAVPAGPDGPALVADVERAVAAVDRTVADATPKA
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 23611; Mature: 23480
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGPASERAGCPSFACFLAEPVIMPTEPEIPRCRLMLVLPPTLSAAEAIACMGAGDVAA CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEE VIVTTPAGDETAAKAQLSELCTATQAAGVAFLLADRVELASDIGADGVHLGSYAALKRAL EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHC PAVKPGGIAGIGLEGRHEAMEAGEAGADYVLFGARDGSGPIEPVVELVSWWAEVFEVPCV CCCCCCCEEECCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC GVATTVEDARAIAVAGADFVALAAVPAGPDGPALVADVERAVAAVDRTVADATPKA CEEEHHHCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PSGPASERAGCPSFACFLAEPVIMPTEPEIPRCRLMLVLPPTLSAAEAIACMGAGDVAA CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEE VIVTTPAGDETAAKAQLSELCTATQAAGVAFLLADRVELASDIGADGVHLGSYAALKRAL EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHC PAVKPGGIAGIGLEGRHEAMEAGEAGADYVLFGARDGSGPIEPVVELVSWWAEVFEVPCV CCCCCCCEEECCCCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC GVATTVEDARAIAVAGADFVALAAVPAGPDGPALVADVERAVAAVDRTVADATPKA CEEEHHHCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA