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The map label for this gene is ybeQ [H]

Identifier: 158422123

GI number: 158422123

Start: 556652

End: 557665

Strand: Reverse

Name: ybeQ [H]

Synonym: AZC_0499

Alternate gene names: 158422123

Gene position: 557665-556652 (Counterclockwise)

Preceding gene: 158422124

Following gene: 158422122

Centisome position: 10.39

GC content: 68.74

Gene sequence:

>1014_bases
ATGATGGATCGCGTGCTTCGTCTCCTGCGCCCGCTGCTTGGCATTGCGGCGGCCTCCGCCCTCAGTGTCGCCCTCGCCTT
GCCGGCGGCGGCCCAGGATCCGAAGCCCGCCCAGAAGCCCGCTGCCAAGCCGGCGGCGAAACCCGCGGCCCCCAAGGCTC
CGGTGAGCAGCCAGCCGGAAGACGCCGCTTATGGCGCCTACCAGCGCGGCCTCTATCTCGCCGCCTACAAGGAAGCCTCC
GCCCGCGCCGCCGCCGGCCCGGATGCCGCCGCCGAGACGCTGCTGGGCGAGATCTATGCGCAGGGCTCCGGCGTGCCGCG
CAGCCCGGCCAAGGCGGTGGAATGGTATCAAAAGGCCATCGACCACGGCTCCGAGCAGGCCGCCTTCTCGCTCGCCATGA
TGAACCTCATGGGCGACGGCATCCCCCGCGACCTCAAGAAGGCCGCGCAGTTGCTGGAAGTTGCCGCGAAGAAGGGCAAC
GCCTCGGCCGCCTACAATCTCGGCCTGCTCTATCTCCAGGGCGAGGCCATGCCGCAGGACTTCACACTCGCCGCCAAGTG
GTTCCGGCAGGCCGCCGACGCGCAGGTGGCGGATGCGCAATACGCGCTCTCGGTGCTGCTGCGCCAGGGTAATGGCGTGC
CGGCGGACAAGGATGCCGCCCTGAAGATGCTGGCCGCCGCCGCCGCGCAGGACCATGTGACGGCGCAGGTGGAATATGCC
ATCGCCATCTTCAACGGCGACGGCGTGCCCAAGGACGAGGCCAAGGCCGCAGCCCTGTTTAAGAAGGCGGCGCTCGCCGG
CAATGCAATCGCGCAGAACCGCTATGCGCGTGTCCTCTCCGCCGGTCGCGGCGCGCCGCAGGACAAGGTCCGCGCCGCCG
CGTGGCACATGCTTTCCAAGGCGCAAGGCCTTGGAGATCCTTATCTCGACGACTTCGTTGCCAAGCTCACGCCGGAAGAG
CAGCAGAAGGCCACGGCGCTGGCCCACAAATGGATGGGCGAATCGCGGTCTTGA

Upstream 100 bases:

>100_bases
GTCCGGATGGTCCCGCACTCGTTGCGGACGTGGAGCGCGCCGTCGCCGCCGTGGACCGCACCGTGGCCGACGCCACGCCC
AAGGCCTGAGTGGAAAACGC

Downstream 100 bases:

>100_bases
CGTTGCCATGAGAGGGGGGCACACGGACGCTCCCCTTTTCGATTTGCCGGCAGCCGCGCCCTGGCTGCACAGGGCCTGCC
AGGAAACACCCAGCCATGAT

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MMDRVLRLLRPLLGIAAASALSVALALPAAAQDPKPAQKPAAKPAAKPAAPKAPVSSQPEDAAYGAYQRGLYLAAYKEAS
ARAAAGPDAAAETLLGEIYAQGSGVPRSPAKAVEWYQKAIDHGSEQAAFSLAMMNLMGDGIPRDLKKAAQLLEVAAKKGN
ASAAYNLGLLYLQGEAMPQDFTLAAKWFRQAADAQVADAQYALSVLLRQGNGVPADKDAALKMLAAAAAQDHVTAQVEYA
IAIFNGDGVPKDEAKAAALFKKAALAGNAIAQNRYARVLSAGRGAPQDKVRAAAWHMLSKAQGLGDPYLDDFVAKLTPEE
QQKATALAHKWMGESRS

Sequences:

>Translated_337_residues
MMDRVLRLLRPLLGIAAASALSVALALPAAAQDPKPAQKPAAKPAAKPAAPKAPVSSQPEDAAYGAYQRGLYLAAYKEAS
ARAAAGPDAAAETLLGEIYAQGSGVPRSPAKAVEWYQKAIDHGSEQAAFSLAMMNLMGDGIPRDLKKAAQLLEVAAKKGN
ASAAYNLGLLYLQGEAMPQDFTLAAKWFRQAADAQVADAQYALSVLLRQGNGVPADKDAALKMLAAAAAQDHVTAQVEYA
IAIFNGDGVPKDEAKAAALFKKAALAGNAIAQNRYARVLSAGRGAPQDKVRAAAWHMLSKAQGLGDPYLDDFVAKLTPEE
QQKATALAHKWMGESRS
>Mature_337_residues
MMDRVLRLLRPLLGIAAASALSVALALPAAAQDPKPAQKPAAKPAAKPAAPKAPVSSQPEDAAYGAYQRGLYLAAYKEAS
ARAAAGPDAAAETLLGEIYAQGSGVPRSPAKAVEWYQKAIDHGSEQAAFSLAMMNLMGDGIPRDLKKAAQLLEVAAKKGN
ASAAYNLGLLYLQGEAMPQDFTLAAKWFRQAADAQVADAQYALSVLLRQGNGVPADKDAALKMLAAAAAQDHVTAQVEYA
IAIFNGDGVPKDEAKAAALFKKAALAGNAIAQNRYARVLSAGRGAPQDKVRAAAWHMLSKAQGLGDPYLDDFVAKLTPEE
QQKATALAHKWMGESRS

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=274, Percent_Identity=27.7372262773723, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI19923669, Length=175, Percent_Identity=30.2857142857143, Blast_Score=75, Evalue=6e-14,
Organism=Escherichia coli, GI87081769, Length=235, Percent_Identity=32.3404255319149, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1786867, Length=116, Percent_Identity=31.8965517241379, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17563256, Length=181, Percent_Identity=28.7292817679558, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21355295, Length=184, Percent_Identity=32.6086956521739, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 35227; Mature: 35227

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDRVLRLLRPLLGIAAASALSVALALPAAAQDPKPAQKPAAKPAAKPAAPKAPVSSQPE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAAYGAYQRGLYLAAYKEASARAAAGPDAAAETLLGEIYAQGSGVPRSPAKAVEWYQKAI
HHHHHHHHCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
DHGSEQAAFSLAMMNLMGDGIPRDLKKAAQLLEVAAKKGNASAAYNLGLLYLQGEAMPQD
HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCH
FTLAAKWFRQAADAQVADAQYALSVLLRQGNGVPADKDAALKMLAAAAAQDHVTAQVEYA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEE
IAIFNGDGVPKDEAKAAALFKKAALAGNAIAQNRYARVLSAGRGAPQDKVRAAAWHMLSK
EEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AQGLGDPYLDDFVAKLTPEEQQKATALAHKWMGESRS
HCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMDRVLRLLRPLLGIAAASALSVALALPAAAQDPKPAQKPAAKPAAKPAAPKAPVSSQPE
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAAYGAYQRGLYLAAYKEASARAAAGPDAAAETLLGEIYAQGSGVPRSPAKAVEWYQKAI
HHHHHHHHCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
DHGSEQAAFSLAMMNLMGDGIPRDLKKAAQLLEVAAKKGNASAAYNLGLLYLQGEAMPQD
HCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCH
FTLAAKWFRQAADAQVADAQYALSVLLRQGNGVPADKDAALKMLAAAAAQDHVTAQVEYA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEE
IAIFNGDGVPKDEAKAAALFKKAALAGNAIAQNRYARVLSAGRGAPQDKVRAAAWHMLSK
EEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AQGLGDPYLDDFVAKLTPEEQQKATALAHKWMGESRS
HCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]