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The map label for this gene is ybfB [H]

Identifier: 158422057

GI number: 158422057

Start: 487121

End: 488434

Strand: Reverse

Name: ybfB [H]

Synonym: AZC_0433

Alternate gene names: 158422057

Gene position: 488434-487121 (Counterclockwise)

Preceding gene: 158422058

Following gene: 158422052

Centisome position: 9.1

GC content: 69.1

Gene sequence:

>1314_bases
ATGTCCTCCCCCGCCCCCGCTCTTCAGCCATCCCCCGTCCCGGCCGCCTTTGCCCGCCTGGGCATCCATTACGGCTGGGT
CGTCGCCTTCGTGACCTTCCTCACCATGCTGGTCACCGCCGGCGCGGTGGGCACGCCGGGCATCCTCATAGGACCCCTGC
AGCAGGAGTTCGGCTGGAGCACCTCGGCCATCTCGTCCGCCTTCGCCATCCGCCTCGTGCTGTTCGGCTTCATGGGACCG
TTCGCGGCGGCCTTCATGAACCGGTTCGGCGTGCGGCGGGTGGCCGTGGTGGCCCTGTCGCTCATCTTCGCAGGCGTGCT
GGGCTCCTTTGCCATGACGCAGCTCTGGCAGCTCGTTCTGCTCTGGGGCTTTGTGGTCGGCTTCGGCACCGGGCTCACCG
CCATGGTGCTGGGCGCGACCGTCGCCACCCGGTGGTTCGTCGCCCGGCGGGGGTTGGTGATCGGCCTGCTCACCGCCAGC
ACGGCCACCGGGCAACTCGTCTTCCTGCCGCTGCTCGCTGAACTGACCCAGACGCTCGGCTGGCGTAGCGCACTGACCGT
CGTGCTGGTGCTGCTTGGTGTCGCCGCTCTCATCGTGCTGGCACTGATGCGCGACCGCCCCTCGGATGTCGGTCTTGCGC
CCTTTGGAGCGCCTGCCGGCACGGTCCCGGCCGCACCCGCCGGGCCGGCGAGCCTCTCCGCCATGCTCGCCTCGCCGCTA
TTGGCCCTGCGCGATGCCGCCCGCACCCGCATCTTCTGGATGCTGTTCGGCACCTTTTTCGTCTGCGGCGCCAGCACCAA
CGGTCTGGTGCAGACCCATTTCGTCTCGCTGTGCGGAGATTTCGGCCTGGCGCCCGTCGCCGCCGCGGGCATGCTCGCCG
TCATCGGCGTCTTCGATTTCGCCGGCACGGTGGGATCGGGCTGGCTCTCCGACCGCTTCGACAGCCGCACCCTGCTGTTC
TGGTATTACGGACTGCGCGGCCTGTCGCTGATCTACCTGCCCTTCACCAGCTTCAGCTTCTACGAACTGTCCGTTTTCGC
CGTCTTCTACGGGCTGGATTGGGTCGCCACCGTGCCACCCACCGTGAAGCTGACGGCGGACCGCTTCGGCGAGCGGGCCA
ATCTCGTCTTCGGCTGGGTCTTCGCCGGGCATCAGATGGGTGCCGCCTTCGCCGCCTGGGGCGCGGGCTTCACCCGCACC
GCCTATGACACCTACCTGCCCGCCTTCTTCTTCGCCGGCGTGCTGTGTGTCGCGGCCGCGCTCGCCATCATCGCCTTGCG
CGAACCGCGCGTCCCGGCACCGGCGGCGGCGTGA

Upstream 100 bases:

>100_bases
GCGTCTGGGCGCCGAGCGTCTCGCCCTCCTGGACCAACTGAACCAGTTGCTGTGATCTTTTACCCTGATACGGGCATGTG
CCCCTAAACTGGATTCCGCC

Downstream 100 bases:

>100_bases
GAGTTGGCGGGTGGAGATTGCCCAGCCCTTCCTCTCCCAGATCGAAACCGGCAAACGGGAGGGTGGCATCGACACGCTGA
AGCGGATCGCTTCCGCCCTC

Product: transmembrane transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MSSPAPALQPSPVPAAFARLGIHYGWVVAFVTFLTMLVTAGAVGTPGILIGPLQQEFGWSTSAISSAFAIRLVLFGFMGP
FAAAFMNRFGVRRVAVVALSLIFAGVLGSFAMTQLWQLVLLWGFVVGFGTGLTAMVLGATVATRWFVARRGLVIGLLTAS
TATGQLVFLPLLAELTQTLGWRSALTVVLVLLGVAALIVLALMRDRPSDVGLAPFGAPAGTVPAAPAGPASLSAMLASPL
LALRDAARTRIFWMLFGTFFVCGASTNGLVQTHFVSLCGDFGLAPVAAAGMLAVIGVFDFAGTVGSGWLSDRFDSRTLLF
WYYGLRGLSLIYLPFTSFSFYELSVFAVFYGLDWVATVPPTVKLTADRFGERANLVFGWVFAGHQMGAAFAAWGAGFTRT
AYDTYLPAFFFAGVLCVAAALAIIALREPRVPAPAAA

Sequences:

>Translated_437_residues
MSSPAPALQPSPVPAAFARLGIHYGWVVAFVTFLTMLVTAGAVGTPGILIGPLQQEFGWSTSAISSAFAIRLVLFGFMGP
FAAAFMNRFGVRRVAVVALSLIFAGVLGSFAMTQLWQLVLLWGFVVGFGTGLTAMVLGATVATRWFVARRGLVIGLLTAS
TATGQLVFLPLLAELTQTLGWRSALTVVLVLLGVAALIVLALMRDRPSDVGLAPFGAPAGTVPAAPAGPASLSAMLASPL
LALRDAARTRIFWMLFGTFFVCGASTNGLVQTHFVSLCGDFGLAPVAAAGMLAVIGVFDFAGTVGSGWLSDRFDSRTLLF
WYYGLRGLSLIYLPFTSFSFYELSVFAVFYGLDWVATVPPTVKLTADRFGERANLVFGWVFAGHQMGAAFAAWGAGFTRT
AYDTYLPAFFFAGVLCVAAALAIIALREPRVPAPAAA
>Mature_436_residues
SSPAPALQPSPVPAAFARLGIHYGWVVAFVTFLTMLVTAGAVGTPGILIGPLQQEFGWSTSAISSAFAIRLVLFGFMGPF
AAAFMNRFGVRRVAVVALSLIFAGVLGSFAMTQLWQLVLLWGFVVGFGTGLTAMVLGATVATRWFVARRGLVIGLLTAST
ATGQLVFLPLLAELTQTLGWRSALTVVLVLLGVAALIVLALMRDRPSDVGLAPFGAPAGTVPAAPAGPASLSAMLASPLL
ALRDAARTRIFWMLFGTFFVCGASTNGLVQTHFVSLCGDFGLAPVAAAGMLAVIGVFDFAGTVGSGWLSDRFDSRTLLFW
YYGLRGLSLIYLPFTSFSFYELSVFAVFYGLDWVATVPPTVKLTADRFGERANLVFGWVFAGHQMGAAFAAWGAGFTRTA
YDTYLPAFFFAGVLCVAAALAIIALREPRVPAPAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Caenorhabditis elegans, GI17550316, Length=175, Percent_Identity=30.2857142857143, Blast_Score=72, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46029; Mature: 45897

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPAPALQPSPVPAAFARLGIHYGWVVAFVTFLTMLVTAGAVGTPGILIGPLQQEFGWS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHCCC
TSAISSAFAIRLVLFGFMGPFAAAFMNRFGVRRVAVVALSLIFAGVLGSFAMTQLWQLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWGFVVGFGTGLTAMVLGATVATRWFVARRGLVIGLLTASTATGQLVFLPLLAELTQTLG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHC
WRSALTVVLVLLGVAALIVLALMRDRPSDVGLAPFGAPAGTVPAAPAGPASLSAMLASPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LALRDAARTRIFWMLFGTFFVCGASTNGLVQTHFVSLCGDFGLAPVAAAGMLAVIGVFDF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AGTVGSGWLSDRFDSRTLLFWYYGLRGLSLIYLPFTSFSFYELSVFAVFYGLDWVATVPP
HCCCCCCCHHCCCCCCEEEHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCHHCCCCC
TVKLTADRFGERANLVFGWVFAGHQMGAAFAAWGAGFTRTAYDTYLPAFFFAGVLCVAAA
CEEEEHHHCCCCCCEEEEEEHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAIIALREPRVPAPAAA
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SSPAPALQPSPVPAAFARLGIHYGWVVAFVTFLTMLVTAGAVGTPGILIGPLQQEFGWS
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHCCC
TSAISSAFAIRLVLFGFMGPFAAAFMNRFGVRRVAVVALSLIFAGVLGSFAMTQLWQLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWGFVVGFGTGLTAMVLGATVATRWFVARRGLVIGLLTASTATGQLVFLPLLAELTQTLG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHC
WRSALTVVLVLLGVAALIVLALMRDRPSDVGLAPFGAPAGTVPAAPAGPASLSAMLASPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LALRDAARTRIFWMLFGTFFVCGASTNGLVQTHFVSLCGDFGLAPVAAAGMLAVIGVFDF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AGTVGSGWLSDRFDSRTLLFWYYGLRGLSLIYLPFTSFSFYELSVFAVFYGLDWVATVPP
HCCCCCCCHHCCCCCCEEEHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCHHCCCCC
TVKLTADRFGERANLVFGWVFAGHQMGAAFAAWGAGFTRTAYDTYLPAFFFAGVLCVAAA
CEEEEHHHCCCCCCEEEEEEHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAIIALREPRVPAPAAA
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]