| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is marR
Identifier: 158422058
GI number: 158422058
Start: 488480
End: 488878
Strand: Reverse
Name: marR
Synonym: AZC_0434
Alternate gene names: NA
Gene position: 488878-488480 (Counterclockwise)
Preceding gene: 158422060
Following gene: 158422057
Centisome position: 9.1
GC content: 70.18
Gene sequence:
>399_bases ATGTCTCCACCGTGCCACTGCACCCGCCTGCGGATCGCCACCCGCAAGATGACGGCCCTCTACGATACGGCGCTGGCGCC CACCGGCATCAATGTCGCGCAATTCTCCATCCTGCGCACCATCGAGCGGCGGCAGCCGGTCAGCCTGACGGAGCTGGGGC GGCTGCTGGCCCTTGACCGCTCCACCATGGGCCGCAACGTCCGCGTGCTGGAGAAGCAGGGGCTGGTGGCGCTCGGGCGC GGCAAGGATCAGCGCGAGGCCGCCGCTTCGCTCACGGAGACCGGCACGGCCACGCTCCGGGCAGCCGAGCCGCTCTGGGA AGACTGCCAGACGGACATGGGCCGGCGTCTGGGCGCCGAGCGTCTCGCCCTCCTGGACCAACTGAACCAGTTGCTGTGA
Upstream 100 bases:
>100_bases ATCAGAGTAGGGGGAAGCGCCGGCGAGGCAACCGAAGAGGCCCATGCGCCATCGCGCTTACGGAATTGACGACAGGTTGA TGCGGGCATATACCCAATTC
Downstream 100 bases:
>100_bases TCTTTTACCCTGATACGGGCATGTGCCCCTAAACTGGATTCCGCCATGTCCTCCCCCGCCCCCGCTCTTCAGCCATCCCC CGTCCCGGCCGCCTTTGCCC
Product: regulatory protein
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Regulatory Protein MarR; MarR Family Regulatory Protein; Regulatory Protein; Transcriptional Regulator Protein; MarR Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator Marr Family
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSPPCHCTRLRIATRKMTALYDTALAPTGINVAQFSILRTIERRQPVSLTELGRLLALDRSTMGRNVRVLEKQGLVALGR GKDQREAAASLTETGTATLRAAEPLWEDCQTDMGRRLGAERLALLDQLNQLL
Sequences:
>Translated_132_residues MSPPCHCTRLRIATRKMTALYDTALAPTGINVAQFSILRTIERRQPVSLTELGRLLALDRSTMGRNVRVLEKQGLVALGR GKDQREAAASLTETGTATLRAAEPLWEDCQTDMGRRLGAERLALLDQLNQLL >Mature_131_residues SPPCHCTRLRIATRKMTALYDTALAPTGINVAQFSILRTIERRQPVSLTELGRLLALDRSTMGRNVRVLEKQGLVALGRG KDQREAAASLTETGTATLRAAEPLWEDCQTDMGRRLGAERLALLDQLNQLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14585; Mature: 14454
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPCHCTRLRIATRKMTALYDTALAPTGINVAQFSILRTIERRQPVSLTELGRLLALDR CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH STMGRNVRVLEKQGLVALGRGKDQREAAASLTETGTATLRAAEPLWEDCQTDMGRRLGAE HHCCCCEEEECCCCEEEECCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHH RLALLDQLNQLL HHHHHHHHHHHC >Mature Secondary Structure SPPCHCTRLRIATRKMTALYDTALAPTGINVAQFSILRTIERRQPVSLTELGRLLALDR CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH STMGRNVRVLEKQGLVALGRGKDQREAAASLTETGTATLRAAEPLWEDCQTDMGRRLGAE HHCCCCEEEECCCCEEEECCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHH RLALLDQLNQLL HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA