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The map label for this gene is 158422052

Identifier: 158422052

GI number: 158422052

Start: 482177

End: 483568

Strand: Reverse

Name: 158422052

Synonym: AZC_0428

Alternate gene names: NA

Gene position: 483568-482177 (Counterclockwise)

Preceding gene: 158422057

Following gene: 158422051

Centisome position: 9.01

GC content: 69.76

Gene sequence:

>1392_bases
TTGTTCTTGTTTCGTTCCTGTCTTGGACGTAGGATTCCAAGCATGGAATTGCATCGCGACTCTTCCCCTTCCTCCGCCCC
GGACTTTGCCGCCCTGCCGGACGACCGCTGGTCGGCGGCGCGCGAACGGCTGGATGCGGCGCGACGTCACAGCGCCGAAG
CGCTCGACAAGGCCCGCAGAAGCCGGGGCGAGCCCGCCGGGGAGGAGCCCCGCACCTCGAGGGGCGCGCGCATCATGGGC
CGGCTCGCGGAAGAGCGCGACCGCCCCATGCCCACGCCGCGCGCGGCGGCGCAGGACGCGGCCGCCGGCGAGGGCGGAAC
GCAGGTGGACGAGACGGCACGTCGCGGGCGCGGCGCGCTCTCCAATGCCGCCGGCCGCTTCGAGCCCGCCGCCCGCGTGC
TGTTCGACGACGGATGGCAGTCGCTGGACGACCTGCCCCCCTTCCGCACGCAGGTCACCGAGGAGCGGGCGCGCACCGTC
ATCACCCGCAACCAGTCCCCGGACATCGGCTTCGACCGCTCCATCAATGCCTATCGCGGCTGCGAGCATGGCTGCATCTA
TTGCTTCGCGCGGCCCACCCACGCCTATCAGGGCCTCTCTGCCGGCCTCGATTTCGAGACCAAGCTGTTCGTGAAGCCCG
ATGCGCCCGAGCTGCTGGCGCGCGAGCTGGCGCAGCCGCGCTACCAGCCGCGCACCATCGCCATGGGCACCAATACGGAC
CCCTACCAGCCCATCGAGCGCCAGCACGAGATCACCCGTCGCATCCTCCAGGTGCTGAGCGACTTCGGTCATCCGGTCGC
CATCGTCACCAAGTCGGCGCTGGTGGCGCGGGACATCGACATCCTCGCCCCCATGGCCGAAAAGGGGCTCGCCAAGGTGG
CCATCTCCGTCACCACGCTGGACCCGCATCTCGCCCGCCTCATGGAGCCGCGGGCCGCGGCACCGCACCGGAGGCTCGCC
ACCATCCAGCGCCTGTCGGAGGCCGGCATTCCGACCGCGGTCCTCTCCGCCCCGCTCATTCCCGCGCTCAACGACAGCGA
AATCGAACGCATCCTCGATGCGGCGAAGTTCGCCGGCGCGACGGAAGCCGGCTATGTCACCCTGCGCCTGCCGCTGGAGA
TCGCCGATCTCTTCAAGGAGTGGCTGGTGACGCATTTTCCCGACAAGGCCCGCCACGTGATGGCGCTGGTGCGGGAGATG
CACGGCGGCAAGGATTATGATTCGACCTTCGGCAAGCGCGGGCGGGGCGACGGCCCCTATGCCTGGACGCTCGGCCGCCG
CTTCGAGATCGCCGCCAAGCGGCTGGGGCTCAATGCCCGCAGCCACAAGCTCTCCACCGCCCATTTCCGCCGCCCGGTTC
AGGCCGGCCAGCAGCTCTCGCTTTTCGACTGA

Upstream 100 bases:

>100_bases
CCTTTAGCGGATGAGGGCTCTTGTGGCAACTTTGCGGTGGTGGACAATATACCAGTCAAGCGCCTGATCAAGCGCAAAAC
GCGCTCCTCTACCGGGAAGT

Downstream 100 bases:

>100_bases
GGTCCCGATGCCACCCGCCTTCGCGCTCCATCTCGTCACGCTCGGCGTCGCCGATCTCCCCCGCGCCACCGCTTTCTATG
CGGCCATGGGGCTGGAGCGG

Product: elongator protein 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MFLFRSCLGRRIPSMELHRDSSPSSAPDFAALPDDRWSAARERLDAARRHSAEALDKARRSRGEPAGEEPRTSRGARIMG
RLAEERDRPMPTPRAAAQDAAAGEGGTQVDETARRGRGALSNAAGRFEPAARVLFDDGWQSLDDLPPFRTQVTEERARTV
ITRNQSPDIGFDRSINAYRGCEHGCIYCFARPTHAYQGLSAGLDFETKLFVKPDAPELLARELAQPRYQPRTIAMGTNTD
PYQPIERQHEITRRILQVLSDFGHPVAIVTKSALVARDIDILAPMAEKGLAKVAISVTTLDPHLARLMEPRAAAPHRRLA
TIQRLSEAGIPTAVLSAPLIPALNDSEIERILDAAKFAGATEAGYVTLRLPLEIADLFKEWLVTHFPDKARHVMALVREM
HGGKDYDSTFGKRGRGDGPYAWTLGRRFEIAAKRLGLNARSHKLSTAHFRRPVQAGQQLSLFD

Sequences:

>Translated_463_residues
MFLFRSCLGRRIPSMELHRDSSPSSAPDFAALPDDRWSAARERLDAARRHSAEALDKARRSRGEPAGEEPRTSRGARIMG
RLAEERDRPMPTPRAAAQDAAAGEGGTQVDETARRGRGALSNAAGRFEPAARVLFDDGWQSLDDLPPFRTQVTEERARTV
ITRNQSPDIGFDRSINAYRGCEHGCIYCFARPTHAYQGLSAGLDFETKLFVKPDAPELLARELAQPRYQPRTIAMGTNTD
PYQPIERQHEITRRILQVLSDFGHPVAIVTKSALVARDIDILAPMAEKGLAKVAISVTTLDPHLARLMEPRAAAPHRRLA
TIQRLSEAGIPTAVLSAPLIPALNDSEIERILDAAKFAGATEAGYVTLRLPLEIADLFKEWLVTHFPDKARHVMALVREM
HGGKDYDSTFGKRGRGDGPYAWTLGRRFEIAAKRLGLNARSHKLSTAHFRRPVQAGQQLSLFD
>Mature_463_residues
MFLFRSCLGRRIPSMELHRDSSPSSAPDFAALPDDRWSAARERLDAARRHSAEALDKARRSRGEPAGEEPRTSRGARIMG
RLAEERDRPMPTPRAAAQDAAAGEGGTQVDETARRGRGALSNAAGRFEPAARVLFDDGWQSLDDLPPFRTQVTEERARTV
ITRNQSPDIGFDRSINAYRGCEHGCIYCFARPTHAYQGLSAGLDFETKLFVKPDAPELLARELAQPRYQPRTIAMGTNTD
PYQPIERQHEITRRILQVLSDFGHPVAIVTKSALVARDIDILAPMAEKGLAKVAISVTTLDPHLARLMEPRAAAPHRRLA
TIQRLSEAGIPTAVLSAPLIPALNDSEIERILDAAKFAGATEAGYVTLRLPLEIADLFKEWLVTHFPDKARHVMALVREM
HGGKDYDSTFGKRGRGDGPYAWTLGRRFEIAAKRLGLNARSHKLSTAHFRRPVQAGQQLSLFD

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 51269; Mature: 51269

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLFRSCLGRRIPSMELHRDSSPSSAPDFAALPDDRWSAARERLDAARRHSAEALDKARR
CHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGEPAGEEPRTSRGARIMGRLAEERDRPMPTPRAAAQDAAAGEGGTQVDETARRGRGAL
HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHH
SNAAGRFEPAARVLFDDGWQSLDDLPPFRTQVTEERARTVITRNQSPDIGFDRSINAYRG
HHCCCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHC
CEHGCIYCFARPTHAYQGLSAGLDFETKLFVKPDAPELLARELAQPRYQPRTIAMGTNTD
CCCCEEEEEECCHHHHHCHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCC
PYQPIERQHEITRRILQVLSDFGHPVAIVTKSALVARDIDILAPMAEKGLAKVAISVTTL
CCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEC
DPHLARLMEPRAAAPHRRLATIQRLSEAGIPTAVLSAPLIPALNDSEIERILDAAKFAGA
CHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
TEAGYVTLRLPLEIADLFKEWLVTHFPDKARHVMALVREMHGGKDYDSTFGKRGRGDGPY
CCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCE
AWTLGRRFEIAAKRLGLNARSHKLSTAHFRRPVQAGQQLSLFD
EEECCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFLFRSCLGRRIPSMELHRDSSPSSAPDFAALPDDRWSAARERLDAARRHSAEALDKARR
CHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SRGEPAGEEPRTSRGARIMGRLAEERDRPMPTPRAAAQDAAAGEGGTQVDETARRGRGAL
HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHH
SNAAGRFEPAARVLFDDGWQSLDDLPPFRTQVTEERARTVITRNQSPDIGFDRSINAYRG
HHCCCCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHC
CEHGCIYCFARPTHAYQGLSAGLDFETKLFVKPDAPELLARELAQPRYQPRTIAMGTNTD
CCCCEEEEEECCHHHHHCHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCC
PYQPIERQHEITRRILQVLSDFGHPVAIVTKSALVARDIDILAPMAEKGLAKVAISVTTL
CCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEC
DPHLARLMEPRAAAPHRRLATIQRLSEAGIPTAVLSAPLIPALNDSEIERILDAAKFAGA
CHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
TEAGYVTLRLPLEIADLFKEWLVTHFPDKARHVMALVREMHGGKDYDSTFGKRGRGDGPY
CCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCE
AWTLGRRFEIAAKRLGLNARSHKLSTAHFRRPVQAGQQLSLFD
EEECCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]