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The map label for this gene is ypfH [C]

Identifier: 158421994

GI number: 158421994

Start: 425226

End: 425885

Strand: Reverse

Name: ypfH [C]

Synonym: AZC_0370

Alternate gene names: 158421994

Gene position: 425885-425226 (Counterclockwise)

Preceding gene: 158421995

Following gene: 158421993

Centisome position: 7.93

GC content: 73.18

Gene sequence:

>660_bases
ATGTCCCTCACCGAAGGTCCCCGCCTCGCCCCGTCTGCGGGCGGTCCCGCCGATTCGCTCGTGGTGCTGGTGCACGGTTA
TGGCGCGGACGGCCGCGACCTCATCGATCTCGGCGCCGCCTGGGCGGAAATCCTGCCCCACACCGCCTTCGTCGCCCCCC
ATGCCCCGCATCCCTGCGACCAGATGCCGGTGGGGCGGCAGTGGTTTCCCCTCTCGCTCGCGGATCCTCACGCCATTGCG
CGCGACACGCTCTCAGCCCTGCCCGCCTTCGCCCGGCTTCTGGATGAGGAACGCACGCGCCTTGATCTGCCCTGGAGCCG
GGTGGCGCTGTTCGGTTTCAGCCAGGGAGCCATGATGGCGCTCTCCTTCGCGGTGACGGCGCCCGAGCCCATCGCCGCCG
TGGTGGGCGCGTCCGGCTTCCTGCCGCCGCTGCTGCCGCCGGGCCTCGCGCCGTCGCGGCCGCCCGTGCTGCTGATGCAT
GGCGGGCGCGATGAGGTGGTGCCGGTCTATGCACTCACCGCCACCGCCGCCGCCCTCTCGGCCGCCGGCGTCCGCGCCGA
GACGCACCTTACCCAATCGCTCGGCCACGGCATCGACGAGGAGGGCGTGGAGCGGGCCGGCCTCTTTCTCGCCGCCCACC
TCGCCCCGCCGACCGGCTGA

Upstream 100 bases:

>100_bases
CTGGCGGCCCTATCGCGGCGTGGCGGCCCATCTGCTCTGGGCCTATTATGGCGCCCGCCGCGCCCGTCTTGGCGCCCCCG
CCTGATCCCGGATTTTCCGA

Downstream 100 bases:

>100_bases
CGCGTTAACCATTTGGGCAGGAAGACACTTTCTGCCGATCACGGGCAGATTCCAGCAACGTCAGGTATATTTTCCAGCGG
TAACAAGATGGGCGTCCACG

Product: phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSLTEGPRLAPSAGGPADSLVVLVHGYGADGRDLIDLGAAWAEILPHTAFVAPHAPHPCDQMPVGRQWFPLSLADPHAIA
RDTLSALPAFARLLDEERTRLDLPWSRVALFGFSQGAMMALSFAVTAPEPIAAVVGASGFLPPLLPPGLAPSRPPVLLMH
GGRDEVVPVYALTATAAALSAAGVRAETHLTQSLGHGIDEEGVERAGLFLAAHLAPPTG

Sequences:

>Translated_219_residues
MSLTEGPRLAPSAGGPADSLVVLVHGYGADGRDLIDLGAAWAEILPHTAFVAPHAPHPCDQMPVGRQWFPLSLADPHAIA
RDTLSALPAFARLLDEERTRLDLPWSRVALFGFSQGAMMALSFAVTAPEPIAAVVGASGFLPPLLPPGLAPSRPPVLLMH
GGRDEVVPVYALTATAAALSAAGVRAETHLTQSLGHGIDEEGVERAGLFLAAHLAPPTG
>Mature_218_residues
SLTEGPRLAPSAGGPADSLVVLVHGYGADGRDLIDLGAAWAEILPHTAFVAPHAPHPCDQMPVGRQWFPLSLADPHAIAR
DTLSALPAFARLLDEERTRLDLPWSRVALFGFSQGAMMALSFAVTAPEPIAAVVGASGFLPPLLPPGLAPSRPPVLLMHG
GRDEVVPVYALTATAAALSAAGVRAETHLTQSLGHGIDEEGVERAGLFLAAHLAPPTG

Specific function: Unknown

COG id: COG0400

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase 2 family [H]

Homologues:

Organism=Escherichia coli, GI87082111, Length=192, Percent_Identity=28.6458333333333, Blast_Score=70, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17508057, Length=214, Percent_Identity=25.2336448598131, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003140 [H]

Pfam domain/function: PF02230 Abhydrolase_2 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 22680; Mature: 22549

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTEGPRLAPSAGGPADSLVVLVHGYGADGRDLIDLGAAWAEILPHTAFVAPHAPHPCD
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCC
QMPVGRQWFPLSLADPHAIARDTLSALPAFARLLDEERTRLDLPWSRVALFGFSQGAMMA
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCEEE
LSFAVTAPEPIAAVVGASGFLPPLLPPGLAPSRPPVLLMHGGRDEVVPVYALTATAAALS
EEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHH
AAGVRAETHLTQSLGHGIDEEGVERAGLFLAAHLAPPTG
HHCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCC
>Mature Secondary Structure 
SLTEGPRLAPSAGGPADSLVVLVHGYGADGRDLIDLGAAWAEILPHTAFVAPHAPHPCD
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCC
QMPVGRQWFPLSLADPHAIARDTLSALPAFARLLDEERTRLDLPWSRVALFGFSQGAMMA
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCCEEE
LSFAVTAPEPIAAVVGASGFLPPLLPPGLAPSRPPVLLMHGGRDEVVPVYALTATAAALS
EEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHH
AAGVRAETHLTQSLGHGIDEEGVERAGLFLAAHLAPPTG
HHCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]