| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is 158421993
Identifier: 158421993
GI number: 158421993
Start: 424440
End: 424997
Strand: Reverse
Name: 158421993
Synonym: AZC_0369
Alternate gene names: NA
Gene position: 424997-424440 (Counterclockwise)
Preceding gene: 158421994
Following gene: 158421991
Centisome position: 7.91
GC content: 62.19
Gene sequence:
>558_bases TTGACCGCTGCTTTATCACCGGGCGCGTGGCCAGCTCTTGTGCTGAATGCGGACTACCGCCCGCTCAGCTATTACCCGCT GTCTGTCTGGTCGTGGCAGGATACCATCAAGGCGGTCTTCCTCGACCGCGTGAATATCGTCGAATATTACGACAAGGCGG TCCGAAGTCCGGGCTTTGAACTGAAGCTACCGAGCGTCGTTTCGCTTCGCACCTTCGTCAAGCCGACCCGTCAGCCGGCT TTCACCCGCTTCAACGTCTTCCTGCGCGACCGCTTCACCTGCCAGTATTGCGGCACCCGCGAGGATCTCACCTTCGACCA CGTCATTCCGCGCTCGCGGGGCGGCCAGACCACCTGGGAAAACGTGGTGGCGGCCTGCTCCCCCTGCAATCTGCGCAAGG GCGGCCTGATGCCAGACGATGCCAAAATGTGGCCCGCGCAGACGCCTTTCCAGCCCAGCGTCCACGACCTGCACCAGAAC GGCCGGCACTTCCCGCCGAACTATCTGCACGAGAGCTGGCTCGACTATCTCTACTGGGACACCGAACTCGACCCCTGA
Upstream 100 bases:
>100_bases GTGCGGGCCTTCACAAGGCTGACATGGAGCCTATACAGTATCCGCGCGTGCCGAACGGGACTGCTCGATTCGGCTGGGAT GGAGGGCGAGGAGAAGATCC
Downstream 100 bases:
>100_bases GGATTCGAGCCTCAGCGCCGGGCGAGCGCGCCCTTGAGGCTGATGCCGGTGAGGCCGAGTGCAATGACGGCGTTCCAGCC GGCCATGGAGATGCCGAACA
Product: HNH endonuclease
Products: NA
Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain Protein; HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTAALSPGAWPALVLNADYRPLSYYPLSVWSWQDTIKAVFLDRVNIVEYYDKAVRSPGFELKLPSVVSLRTFVKPTRQPA FTRFNVFLRDRFTCQYCGTREDLTFDHVIPRSRGGQTTWENVVAACSPCNLRKGGLMPDDAKMWPAQTPFQPSVHDLHQN GRHFPPNYLHESWLDYLYWDTELDP
Sequences:
>Translated_185_residues MTAALSPGAWPALVLNADYRPLSYYPLSVWSWQDTIKAVFLDRVNIVEYYDKAVRSPGFELKLPSVVSLRTFVKPTRQPA FTRFNVFLRDRFTCQYCGTREDLTFDHVIPRSRGGQTTWENVVAACSPCNLRKGGLMPDDAKMWPAQTPFQPSVHDLHQN GRHFPPNYLHESWLDYLYWDTELDP >Mature_184_residues TAALSPGAWPALVLNADYRPLSYYPLSVWSWQDTIKAVFLDRVNIVEYYDKAVRSPGFELKLPSVVSLRTFVKPTRQPAF TRFNVFLRDRFTCQYCGTREDLTFDHVIPRSRGGQTTWENVVAACSPCNLRKGGLMPDDAKMWPAQTPFQPSVHDLHQNG RHFPPNYLHESWLDYLYWDTELDP
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21415; Mature: 21284
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAALSPGAWPALVLNADYRPLSYYPLSVWSWQDTIKAVFLDRVNIVEYYDKAVRSPGFE CCCCCCCCCCEEEEEECCCCCCEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LKLPSVVSLRTFVKPTRQPAFTRFNVFLRDRFTCQYCGTREDLTFDHVIPRSRGGQTTWE EECCHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCHHH NVVAACSPCNLRKGGLMPDDAKMWPAQTPFQPSVHDLHQNGRHFPPNYLHESWLDYLYWD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHEECC TELDP CCCCC >Mature Secondary Structure TAALSPGAWPALVLNADYRPLSYYPLSVWSWQDTIKAVFLDRVNIVEYYDKAVRSPGFE CCCCCCCCCEEEEEECCCCCCEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCE LKLPSVVSLRTFVKPTRQPAFTRFNVFLRDRFTCQYCGTREDLTFDHVIPRSRGGQTTWE EECCHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCHHH NVVAACSPCNLRKGGLMPDDAKMWPAQTPFQPSVHDLHQNGRHFPPNYLHESWLDYLYWD HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHEECC TELDP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA