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The map label for this gene is ydhP [H]

Identifier: 158421965

GI number: 158421965

Start: 397457

End: 398626

Strand: Direct

Name: ydhP [H]

Synonym: AZC_0341

Alternate gene names: 158421965

Gene position: 397457-398626 (Clockwise)

Preceding gene: 158421964

Following gene: 158421967

Centisome position: 7.4

GC content: 69.91

Gene sequence:

>1170_bases
ATGCCCTTGTCCCTGCTTTCGCTTGCCGTCGCCGCCTTCGGCATCGGCACCACCGAATTCGTCATCATGGGCCTGTTGCC
CGATGTGGCCCGCGACCTCGGGGTGAGCATTCCCGATGCCGGGCTGCTGGTGTCCGGCTATGCGCTGGGCGTCGTCATCG
GCGCACCGCTGCTCGCCATCCTCACCGCCCGCCTGCCGCGCAAGGCGACGCTGGTGGGCCTCATGGGCCTGTTCATCGTC
GGCAACGTCCTCTGCGCCCTCTCGCCCACCTACGGGCTGTTGATGGGCGCGCGCATCGTTACCGCCTTCTGCCATGCCGC
CTTCTTCGGCATCGGCTCGGTGGTGGCGGCCGATCTCGTGCCGCGCAACAAGCGCGCGCAGGCCATCGCGCTCATGTTCG
CCGGCCTGACGCTCGCCAATGTGCTGGGCGTGCCGGCGGGTACCGCGTTCGGCCAGTGGCTCGGCTGGCGCGCCACCTTC
TGGGCGGTGGTGGGAATCGGCCTTGCCGCGCTCGTCGCGCTGGTGCTGCTGCTGCCCGGCCGCATCCCCATGAAGCAGAG
CCGCATCCTCACCGAATTCCGGGTGCTGAAAGACCGGCAGGTCTTCCTCGCCATGGTCATCAGCGTGGTGTGCTCGGCGA
GCCTGTTCAGCGTCTTCACCTACATCTCGCCGCTGCTGCGGGACGTGACGCATTTCTCTGCGGAAGCGGTCACCGGCGCG
CTGCTGCTGTTCGGCGTCGGCCTCACCGCCGGCAACATGCTGGGCGGGCGGCTCGCCGACTGGCGGCTCATGCCCTCGCT
CATCGGCACGCTGGTGGTGCTGATCGTCGTGCTCGCGGCCTTCACCGGCACCAGCGCCTCGACGGTCCCGGCGCTGGCGA
CGCTGCTGGTGTGGGGCGTGCTCGCCTTCGCCCTCGTGCCGCTGCTGCAATTGCGGGTGGTGGATACGGCGCATGCGGCG
CCGAATCTTGCCTCCACCCTCAATCAGGGCGCCTTCAACCTCGGCAACGCCATCGGCGCCTGGATCGGGGCGGTCGCCAT
CACCCATGGCATCGCCTACCAGCATCTGCCGCTGGTGGGCGTGGCCCTGAGCACGACGGCGCTGGGCCTCAGCCTGCTCT
CCGCCCGGCTGGACCGCCCGGCGCTGGAGGGCGTGCGGGAGGGCGCCTGA

Upstream 100 bases:

>100_bases
CCGCGCCGCATGGCTGCCTCCCGCAGGCGTCACTTGCTGCATCGCAGCAACCCGCGCATCCTGAGGGCAAATCCCGAAAC
GTCAGCTCGGCCCGCCCCCG

Downstream 100 bases:

>100_bases
GCGCCCTCAGCCCTGCGGCAGCACGGCGCGCGGGGCGGTGGCGAGCTGGGCGACGCGCTCCACGATCATCTGCTGGCGCA
TCCGCTCGCGCTTCTGGCGG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MPLSLLSLAVAAFGIGTTEFVIMGLLPDVARDLGVSIPDAGLLVSGYALGVVIGAPLLAILTARLPRKATLVGLMGLFIV
GNVLCALSPTYGLLMGARIVTAFCHAAFFGIGSVVAADLVPRNKRAQAIALMFAGLTLANVLGVPAGTAFGQWLGWRATF
WAVVGIGLAALVALVLLLPGRIPMKQSRILTEFRVLKDRQVFLAMVISVVCSASLFSVFTYISPLLRDVTHFSAEAVTGA
LLLFGVGLTAGNMLGGRLADWRLMPSLIGTLVVLIVVLAAFTGTSASTVPALATLLVWGVLAFALVPLLQLRVVDTAHAA
PNLASTLNQGAFNLGNAIGAWIGAVAITHGIAYQHLPLVGVALSTTALGLSLLSARLDRPALEGVREGA

Sequences:

>Translated_389_residues
MPLSLLSLAVAAFGIGTTEFVIMGLLPDVARDLGVSIPDAGLLVSGYALGVVIGAPLLAILTARLPRKATLVGLMGLFIV
GNVLCALSPTYGLLMGARIVTAFCHAAFFGIGSVVAADLVPRNKRAQAIALMFAGLTLANVLGVPAGTAFGQWLGWRATF
WAVVGIGLAALVALVLLLPGRIPMKQSRILTEFRVLKDRQVFLAMVISVVCSASLFSVFTYISPLLRDVTHFSAEAVTGA
LLLFGVGLTAGNMLGGRLADWRLMPSLIGTLVVLIVVLAAFTGTSASTVPALATLLVWGVLAFALVPLLQLRVVDTAHAA
PNLASTLNQGAFNLGNAIGAWIGAVAITHGIAYQHLPLVGVALSTTALGLSLLSARLDRPALEGVREGA
>Mature_388_residues
PLSLLSLAVAAFGIGTTEFVIMGLLPDVARDLGVSIPDAGLLVSGYALGVVIGAPLLAILTARLPRKATLVGLMGLFIVG
NVLCALSPTYGLLMGARIVTAFCHAAFFGIGSVVAADLVPRNKRAQAIALMFAGLTLANVLGVPAGTAFGQWLGWRATFW
AVVGIGLAALVALVLLLPGRIPMKQSRILTEFRVLKDRQVFLAMVISVVCSASLFSVFTYISPLLRDVTHFSAEAVTGAL
LLFGVGLTAGNMLGGRLADWRLMPSLIGTLVVLIVVLAAFTGTSASTVPALATLLVWGVLAFALVPLLQLRVVDTAHAAP
NLASTLNQGAFNLGNAIGAWIGAVAITHGIAYQHLPLVGVALSTTALGLSLLSARLDRPALEGVREGA

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=372, Percent_Identity=46.505376344086, Blast_Score=294, Evalue=6e-81,
Organism=Escherichia coli, GI1786595, Length=383, Percent_Identity=35.2480417754569, Blast_Score=215, Evalue=4e-57,
Organism=Escherichia coli, GI1787808, Length=344, Percent_Identity=33.1395348837209, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI145693198, Length=328, Percent_Identity=24.6951219512195, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40157; Mature: 40025

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure 
PLSLLSLAVAAFGIGTTEFVIMGLLPDVARDLGVSIPDAGLLVSGYALGVVIGAPLLAI
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LTARLPRKATLVGLMGLFIVGNVLCALSPTYGLLMGARIVTAFCHAAFFGIGSVVAADLV
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PRNKRAQAIALMFAGLTLANVLGVPAGTAFGQWLGWRATFWAVVGIGLAALVALVLLLPG
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RIPMKQSRILTEFRVLKDRQVFLAMVISVVCSASLFSVFTYISPLLRDVTHFSAEAVTGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLFGVGLTAGNMLGGRLADWRLMPSLIGTLVVLIVVLAAFTGTSASTVPALATLLVWGV
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LAFALVPLLQLRVVDTAHAAPNLASTLNQGAFNLGNAIGAWIGAVAITHGIAYQHLPLVG
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VALSTTALGLSLLSARLDRPALEGVREGA
HHHHHHHHHHHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]