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The map label for this gene is 158421967

Identifier: 158421967

GI number: 158421967

Start: 399263

End: 399859

Strand: Direct

Name: 158421967

Synonym: AZC_0343

Alternate gene names: NA

Gene position: 399263-399859 (Clockwise)

Preceding gene: 158421965

Following gene: 158421968

Centisome position: 7.44

GC content: 65.66

Gene sequence:

>597_bases
ATGGCTCTTCGTGTCTCGGGAAAGAACATGGACGTCGGTGAAGCGCTCAGGCAGCGTTTTTCGGACCGCGTCTCCGAGGT
GGTCGGCAAGTATTTCGATGGTGGGTGGTCCGGCCACGCCACTGTCTGCCGCGAGGGGTCGGGCTACAGGTCCGAACTGC
TGCTCCATCTCGATTCGGGCACCAATCTCCAGGCCCACGGCAATGCGCAGGAACCCAATGCCTGCGCCGATGCGGCCATG
GAGAAGATCGAGAAGCGCCTGCGCCGCTACAAGCAGCGCCTCAAGGGCCGCCATCCCCAGCCGGTCAACGGCGTCGACAG
CTACCTTGCCCAGAGCTACGTGCTCGACATCTCGCCCCTCGAGGAAGCCGAGGAGGAGGATATCGAGGGCTGGAGCCCGA
CGGTGGTGGCCGAGCATCCCACCCGCCTCAAGACGCTCTCCGTGCGCGATGCGGTGGTGGAACTGGAGGTGACGGGCGCG
CCGGTGGTGGTCTTCCGCCATGCCGGACATGGCCGCGTGAGCGTCGTTTACCGGCGCGCCGACGGGCATGTGGGCTGGAT
CGACCCCTCCGCGATTTCGCCCGAGGAAAGCCATTGA

Upstream 100 bases:

>100_bases
CAAAGCGCTCCTACCACTGATAGGCCGGCCGGTTTGCAAGAACAAAGGCGCAGGCGGCGGAGGGCACTCCGTCACTTGCG
CCCAACAGGGATCAAATCGC

Downstream 100 bases:

>100_bases
CCGACGTGGGGGCTTGGGACTAGCGTCCGCCGCCGTCTGTGGGGCCTGAGCCGGTCAGGTTGCGTGCGACCTGACCGGTG
CGCCAGTCTCCACATCGCGT

Product: sigma 54 modulation protein

Products: NA

Alternate protein names: ORF203 [H]

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MALRVSGKNMDVGEALRQRFSDRVSEVVGKYFDGGWSGHATVCREGSGYRSELLLHLDSGTNLQAHGNAQEPNACADAAM
EKIEKRLRRYKQRLKGRHPQPVNGVDSYLAQSYVLDISPLEEAEEEDIEGWSPTVVAEHPTRLKTLSVRDAVVELEVTGA
PVVVFRHAGHGRVSVVYRRADGHVGWIDPSAISPEESH

Sequences:

>Translated_198_residues
MALRVSGKNMDVGEALRQRFSDRVSEVVGKYFDGGWSGHATVCREGSGYRSELLLHLDSGTNLQAHGNAQEPNACADAAM
EKIEKRLRRYKQRLKGRHPQPVNGVDSYLAQSYVLDISPLEEAEEEDIEGWSPTVVAEHPTRLKTLSVRDAVVELEVTGA
PVVVFRHAGHGRVSVVYRRADGHVGWIDPSAISPEESH
>Mature_197_residues
ALRVSGKNMDVGEALRQRFSDRVSEVVGKYFDGGWSGHATVCREGSGYRSELLLHLDSGTNLQAHGNAQEPNACADAAME
KIEKRLRRYKQRLKGRHPQPVNGVDSYLAQSYVLDISPLEEAEEEDIEGWSPTVVAEHPTRLKTLSVRDAVVELEVTGAP
VVVFRHAGHGRVSVVYRRADGHVGWIDPSAISPEESH

Specific function: Probably modulates the activity of sigma(54) (rpoN) [H]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sigma(54) modulation protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21867; Mature: 21735

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRVSGKNMDVGEALRQRFSDRVSEVVGKYFDGGWSGHATVCREGSGYRSELLLHLDSG
CEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCC
TNLQAHGNAQEPNACADAAMEKIEKRLRRYKQRLKGRHPQPVNGVDSYLAQSYVLDISPL
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCH
EEAEEEDIEGWSPTVVAEHPTRLKTLSVRDAVVELEVTGAPVVVFRHAGHGRVSVVYRRA
HHCCHHCCCCCCCEEEECCCCCEEEEEECCEEEEEEECCCCEEEEEECCCCEEEEEEEEC
DGHVGWIDPSAISPEESH
CCCEECCCCCCCCCCCCC
>Mature Secondary Structure 
ALRVSGKNMDVGEALRQRFSDRVSEVVGKYFDGGWSGHATVCREGSGYRSELLLHLDSG
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCC
TNLQAHGNAQEPNACADAAMEKIEKRLRRYKQRLKGRHPQPVNGVDSYLAQSYVLDISPL
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCCCH
EEAEEEDIEGWSPTVVAEHPTRLKTLSVRDAVVELEVTGAPVVVFRHAGHGRVSVVYRRA
HHCCHHCCCCCCCEEEECCCCCEEEEEECCEEEEEEECCCCEEEEEECCCCEEEEEEEEC
DGHVGWIDPSAISPEESH
CCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1991712; 12597275 [H]