| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is erfK [C]
Identifier: 158421964
GI number: 158421964
Start: 396160
End: 396858
Strand: Direct
Name: erfK [C]
Synonym: AZC_0340
Alternate gene names: 158421964
Gene position: 396160-396858 (Clockwise)
Preceding gene: 158421962
Following gene: 158421965
Centisome position: 7.38
GC content: 67.53
Gene sequence:
>699_bases ATGATCAGGAGCGCTGGACCTTTCTCGTCAGCCCCCCATAAGGGAGAGGCGCCGCGTGCCGGCCTCTCCCGCCGCGCGTT TCTGGCCGGCTCGGCCGTCAGCCTCGGCGCGCTGGGGCTCGCCGGCTGCGCCTCGCAGGACGGCATGACGCTGGCCGAGG CGCAGAAGCTCTACGGGCCGGTGCCGGACAAGAAGTTCGCCATCCCCGCCGCCGACGTCAGCAAGGTGGACCCGAAATAC TTCCGCCGCACCGTGCCCTACGAGACCAAGGAAGCGGTGGGCACCATCATCGTCGATCCGGCCAATTACTACGTCTACCG CATCGAGGAAGACGGCAAGGCGACCCGCTACGGCGCCAATGTGGGCCGCGACGGCTTCCGCTGGAACGGCGAGGCCTATG TGGGCCGCAAGAGCGAGTGGGCCACCTGGACCCCGCCCAGGGAGATGATCAAGCGCCAGCCCGAGGCGGCCAAATGGGCC GGCGGCATGCCCGGCGGTCTCGACAATCCGCTCGGCGCGCGCACGCTGCATCTCTACCAGAACGGCAGCTACACGCTCTA CACCATCTATGCGACCTCCGACCCGGAGACCATCGGCTCCGGCATCACCAGCGGCTGCGTCGGCCTGCTCACGCAGGACA TGATCGACCTCTATGACAAGACCCCGGTGAAGACGAAGGTCATCGTCCTTCCGGCCTGA
Upstream 100 bases:
>100_bases CCGCTTGCAACCCGCCCCGCAAGGCGGCAATGTCCCGCGCTGAAAAGGGCCAGGCCCGTGGGGCCGGCTCACGCATCGGA ATACGGGATACCGCCAGATC
Downstream 100 bases:
>100_bases GGCTGAGGCGGGGCAGGGGGCTCCGGAGCCCGCTCTGAAGTTTGAAGGGCGGCGTCTTTCGGCTTTTCCGGCTGCCCCGG TTTCCCCCTCCCCAACCCTC
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family; ErfK/YbiS/YcfS/YnhG Family Protein/Tat Domain Protein; ErfK/YbiS/YhnG Oxidoreductase; Protein Ybis; ErfK/YbiS/YcfS/YnhG Superfamily; Twin-Arginine Translocation Pathway Signal; Carnitine Operon Oxidoreductase; Carnitine Operon Oxidoreductase CaiA; ATP Synthase Subunit; Protein ErfK/SrfK; ErfK/YbiS/YhnG Protein; Exported ErfK/YbiS/YhnG Family Protein; Signal Peptide Protein; Exported ErfK/YbiS/YhnG Protein; ErfK/YbiS/YhnG Family Protein
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MIRSAGPFSSAPHKGEAPRAGLSRRAFLAGSAVSLGALGLAGCASQDGMTLAEAQKLYGPVPDKKFAIPAADVSKVDPKY FRRTVPYETKEAVGTIIVDPANYYVYRIEEDGKATRYGANVGRDGFRWNGEAYVGRKSEWATWTPPREMIKRQPEAAKWA GGMPGGLDNPLGARTLHLYQNGSYTLYTIYATSDPETIGSGITSGCVGLLTQDMIDLYDKTPVKTKVIVLPA
Sequences:
>Translated_232_residues MIRSAGPFSSAPHKGEAPRAGLSRRAFLAGSAVSLGALGLAGCASQDGMTLAEAQKLYGPVPDKKFAIPAADVSKVDPKY FRRTVPYETKEAVGTIIVDPANYYVYRIEEDGKATRYGANVGRDGFRWNGEAYVGRKSEWATWTPPREMIKRQPEAAKWA GGMPGGLDNPLGARTLHLYQNGSYTLYTIYATSDPETIGSGITSGCVGLLTQDMIDLYDKTPVKTKVIVLPA >Mature_232_residues MIRSAGPFSSAPHKGEAPRAGLSRRAFLAGSAVSLGALGLAGCASQDGMTLAEAQKLYGPVPDKKFAIPAADVSKVDPKY FRRTVPYETKEAVGTIIVDPANYYVYRIEEDGKATRYGANVGRDGFRWNGEAYVGRKSEWATWTPPREMIKRQPEAAKWA GGMPGGLDNPLGARTLHLYQNGSYTLYTIYATSDPETIGSGITSGCVGLLTQDMIDLYDKTPVKTKVIVLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24997; Mature: 24997
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSAGPFSSAPHKGEAPRAGLSRRAFLAGSAVSLGALGLAGCASQDGMTLAEAQKLYGP CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCC VPDKKFAIPAADVSKVDPKYFRRTVPYETKEAVGTIIVDPANYYVYRIEEDGKATRYGAN CCCCCEECCCCCCCCCCHHHHHHCCCCCCHHCCEEEEECCCCEEEEEEECCCCEEECCCC VGRDGFRWNGEAYVGRKSEWATWTPPREMIKRQPEAAKWAGGMPGGLDNPLGARTLHLYQ CCCCCEEECCEEEECCCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEEE NGSYTLYTIYATSDPETIGSGITSGCVGLLTQDMIDLYDKTPVKTKVIVLPA CCCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MIRSAGPFSSAPHKGEAPRAGLSRRAFLAGSAVSLGALGLAGCASQDGMTLAEAQKLYGP CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCC VPDKKFAIPAADVSKVDPKYFRRTVPYETKEAVGTIIVDPANYYVYRIEEDGKATRYGAN CCCCCEECCCCCCCCCCHHHHHHCCCCCCHHCCEEEEECCCCEEEEEEECCCCEEECCCC VGRDGFRWNGEAYVGRKSEWATWTPPREMIKRQPEAAKWAGGMPGGLDNPLGARTLHLYQ CCCCCEEECCEEEECCCCCCCCCCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEEEEE NGSYTLYTIYATSDPETIGSGITSGCVGLLTQDMIDLYDKTPVKTKVIVLPA CCCEEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA