| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158338826
Identifier: 158338826
GI number: 158338826
Start: 5818755
End: 5819177
Strand: Reverse
Name: 158338826
Synonym: AM1_5739
Alternate gene names: NA
Gene position: 5819177-5818755 (Counterclockwise)
Preceding gene: 158338827
Following gene: 158338824
Centisome position: 89.47
GC content: 47.28
Gene sequence:
>423_bases ATGGCTTCCCAACAGCAAGTTAAAGATTATCTAGCCTCTTGGTTACAGTTGGGTAAATCAATCCAGGTAGGTCTGCAACA AAAACCCTACTCTGTTCCGCGCGTTATCCAGGGCGAGCACTATAGTCCTGAGTTCGAATTTTTGTGGCAATATATCCAAA GTTCGGAATCTGGAGAATGCTGTTTGGAGGGTGTCGTCCCCACGATAGAAGAGCTATTGACAGATCAATGGGAAATTACG GATTGTTCTCGCTGTCAGATGCCGGTGAGTTTGCCAGTGGCAGGTATCGCCTCCCCTGAATGTCCTTGCCATGACTTATC GAACTGGCCTAATAATGAACTGCCCCAGCCTCGGACGCCCGTTGATAGTACCGGGCATTTACGATCTATTTACCTTCGAT TAACCCATACCTCTTCGAATTAG
Upstream 100 bases:
>100_bases TTGAAGTGTTTTTAGCGCCATCTGGAGACTGATGTCATTATCCTAAAATTTGAGTTAGAGTCACCCTAACCGTGTGTGAT CCAAAAGGGGTTTAAGCATT
Downstream 100 bases:
>100_bases GGCTGCAAACTCAGGCTTGGGCCTGTCGGGTTTCGATAACATCTCTTGGCGTTATGGAACGTCAATAGGAATTATCTTCA GTAAATTCAGACTCTTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MASQQQVKDYLASWLQLGKSIQVGLQQKPYSVPRVIQGEHYSPEFEFLWQYIQSSESGECCLEGVVPTIEELLTDQWEIT DCSRCQMPVSLPVAGIASPECPCHDLSNWPNNELPQPRTPVDSTGHLRSIYLRLTHTSSN
Sequences:
>Translated_140_residues MASQQQVKDYLASWLQLGKSIQVGLQQKPYSVPRVIQGEHYSPEFEFLWQYIQSSESGECCLEGVVPTIEELLTDQWEIT DCSRCQMPVSLPVAGIASPECPCHDLSNWPNNELPQPRTPVDSTGHLRSIYLRLTHTSSN >Mature_139_residues ASQQQVKDYLASWLQLGKSIQVGLQQKPYSVPRVIQGEHYSPEFEFLWQYIQSSESGECCLEGVVPTIEELLTDQWEITD CSRCQMPVSLPVAGIASPECPCHDLSNWPNNELPQPRTPVDSTGHLRSIYLRLTHTSSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15805; Mature: 15674
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQQQVKDYLASWLQLGKSIQVGLQQKPYSVPRVIQGEHYSPEFEFLWQYIQSSESGEC CCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCH CLEGVVPTIEELLTDQWEITDCSRCQMPVSLPVAGIASPECPCHDLSNWPNNELPQPRTP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VDSTGHLRSIYLRLTHTSSN CCCCCCEEEEEEEEEECCCC >Mature Secondary Structure ASQQQVKDYLASWLQLGKSIQVGLQQKPYSVPRVIQGEHYSPEFEFLWQYIQSSESGEC CCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCH CLEGVVPTIEELLTDQWEITDCSRCQMPVSLPVAGIASPECPCHDLSNWPNNELPQPRTP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VDSTGHLRSIYLRLTHTSSN CCCCCCEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA