| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338783
Identifier: 158338783
GI number: 158338783
Start: 5763163
End: 5764317
Strand: Reverse
Name: 158338783
Synonym: AM1_5694
Alternate gene names: NA
Gene position: 5764317-5763163 (Counterclockwise)
Preceding gene: 158338785
Following gene: 158338777
Centisome position: 88.63
GC content: 48.57
Gene sequence:
>1155_bases ATGGCGAGTCGAGAGCATCTAAACATACTGAATCAGGGCGTTAAAGCCTGGAATCAGTGGAGAGATGCCAACCCTAATAT TCGTCCTAATCTGCAATTGGCAAACCTGAATGGCAAAAACCTCAGCAAGATCAATTTCAGTCGAGCGGATCTGAGCGGTG CGGATCTGAGTGGAACAGAACTCAGGCATGCTCACCTAATTGGCGCTAATCTCAGTCGGGCCTTTATGCGTTGGTCGGAT TTGAGTCGAGCCACCTTGAGAGGGGCCTATTTATGGGGAGCCGATTTGAGTGGCACCACCCTGGAACAGGTGGACCTAAG CTATGCCAAACTGCGTGGGGCAACCATGCGTTGGGCTGACCTTAGCTTTGCCAGACTCACCCAGGCTAACCTCCGAGGGG CTACCCTGAGTGGGGCCACCCTTTGCCGTTCGATTCTGAGAAAGGCAGATTGCAGTTGGACAGAACTCCGCTGGGCCGAT ATGCGGGGAGCCAACCTATATGAAACGGATTTGCGATGGACGGATCTGCGCGGGGCCGATTTGCGGTATTCGTCGCTAGA TTATGCGATCGCACTTTCGTCTGACTTTACCGGAGCCACCTTTACTGGGGCCAGTATCGAAAACTGGAAAATCAGTAACG ACACCAAATTTGATGAAGTTGACTGTGCCTATGTTTATCTCAAGTCTTCCCAACGCGATCGCCATCCCCTAGCGGGCGAT TTTATCTCCGGTGAGTTTATCAACTTAATACAAAAACCCTTAGGCACCATTGACTTACTCTTTTTGCACGGTATCGATTG GTTGGCCTTTGTCGCCGCTTTCCAAGCGCTTACCAAGGAATTTGAACAGTGTGACATCGAGATTCAGGCTATTGAAAAGA AAAGTGGAGGTGCTTTTACAGTCCGCCTAGAAGTTCCCATTGACGCCAATTATGAGGCGATTGAAGCCCAGGCGAAACAG CATTACTCTGCTCAGCTTAAAGCGATTGAGAGACGATATAAATCTCAGCTCAATGCCACTGATGTGGAATTAAAAATCTA CCGCCAGAAAAATGCTGATATCAAGGAGATTACAAAGCTACTAGCAGTTAGACCCTTAAAAGCTAGGAATAAAGCAGCTC TTCAACATCAGCCTAATTTAAGGGTGCCATCTTAA
Upstream 100 bases:
>100_bases GGGATTTAGCAAAATCTTTTGCTCTTATTCACAGAAATGCGGCGAAAAAATTTTTTCAGAGTTATTTTAGTGGAGATGTT AGGGGATTTTGGAGTCGAGC
Downstream 100 bases:
>100_bases AGCCGCTGCTAAAATACCTGCCGATCAAGATAGTTCACATAATCGGTAAATTTGCCCGTGGTTTATAGGTTTCAATTTGG CGGATTTGTTCGTAGAGTTC
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MASREHLNILNQGVKAWNQWRDANPNIRPNLQLANLNGKNLSKINFSRADLSGADLSGTELRHAHLIGANLSRAFMRWSD LSRATLRGAYLWGADLSGTTLEQVDLSYAKLRGATMRWADLSFARLTQANLRGATLSGATLCRSILRKADCSWTELRWAD MRGANLYETDLRWTDLRGADLRYSSLDYAIALSSDFTGATFTGASIENWKISNDTKFDEVDCAYVYLKSSQRDRHPLAGD FISGEFINLIQKPLGTIDLLFLHGIDWLAFVAAFQALTKEFEQCDIEIQAIEKKSGGAFTVRLEVPIDANYEAIEAQAKQ HYSAQLKAIERRYKSQLNATDVELKIYRQKNADIKEITKLLAVRPLKARNKAALQHQPNLRVPS
Sequences:
>Translated_384_residues MASREHLNILNQGVKAWNQWRDANPNIRPNLQLANLNGKNLSKINFSRADLSGADLSGTELRHAHLIGANLSRAFMRWSD LSRATLRGAYLWGADLSGTTLEQVDLSYAKLRGATMRWADLSFARLTQANLRGATLSGATLCRSILRKADCSWTELRWAD MRGANLYETDLRWTDLRGADLRYSSLDYAIALSSDFTGATFTGASIENWKISNDTKFDEVDCAYVYLKSSQRDRHPLAGD FISGEFINLIQKPLGTIDLLFLHGIDWLAFVAAFQALTKEFEQCDIEIQAIEKKSGGAFTVRLEVPIDANYEAIEAQAKQ HYSAQLKAIERRYKSQLNATDVELKIYRQKNADIKEITKLLAVRPLKARNKAALQHQPNLRVPS >Mature_383_residues ASREHLNILNQGVKAWNQWRDANPNIRPNLQLANLNGKNLSKINFSRADLSGADLSGTELRHAHLIGANLSRAFMRWSDL SRATLRGAYLWGADLSGTTLEQVDLSYAKLRGATMRWADLSFARLTQANLRGATLSGATLCRSILRKADCSWTELRWADM RGANLYETDLRWTDLRGADLRYSSLDYAIALSSDFTGATFTGASIENWKISNDTKFDEVDCAYVYLKSSQRDRHPLAGDF ISGEFINLIQKPLGTIDLLFLHGIDWLAFVAAFQALTKEFEQCDIEIQAIEKKSGGAFTVRLEVPIDANYEAIEAQAKQH YSAQLKAIERRYKSQLNATDVELKIYRQKNADIKEITKLLAVRPLKARNKAALQHQPNLRVPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 7 pentapeptide repeat domains [H]
Homologues:
Organism=Homo sapiens, GI39753959, Length=153, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI221377802, Length=156, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 [H]
Pfam domain/function: PF00805 Pentapeptide [H]
EC number: NA
Molecular weight: Translated: 43197; Mature: 43066
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASREHLNILNQGVKAWNQWRDANPNIRPNLQLANLNGKNLSKINFSRADLSGADLSGTE CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCC LRHAHLIGANLSRAFMRWSDLSRATLRGAYLWGADLSGTTLEQVDLSYAKLRGATMRWAD EEEEEEECCHHHHHHHHHHHCHHHHHCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEECC LSFARLTQANLRGATLSGATLCRSILRKADCSWTELRWADMRGANLYETDLRWTDLRGAD CHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHEEEEECCCCCCEEECCCEEEECCCCC LRYSSLDYAIALSSDFTGATFTGASIENWKISNDTKFDEVDCAYVYLKSSQRDRHPLAGD CEECCCCEEEEECCCCCCCEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC FISGEFINLIQKPLGTIDLLFLHGIDWLAFVAAFQALTKEFEQCDIEIQAIEKKSGGAFT CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEE VRLEVPIDANYEAIEAQAKQHYSAQLKAIERRYKSQLNATDVELKIYRQKNADIKEITKL EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHH LAVRPLKARNKAALQHQPNLRVPS HHCCCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure ASREHLNILNQGVKAWNQWRDANPNIRPNLQLANLNGKNLSKINFSRADLSGADLSGTE CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCCCC LRHAHLIGANLSRAFMRWSDLSRATLRGAYLWGADLSGTTLEQVDLSYAKLRGATMRWAD EEEEEEECCHHHHHHHHHHHCHHHHHCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEECC LSFARLTQANLRGATLSGATLCRSILRKADCSWTELRWADMRGANLYETDLRWTDLRGAD CHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHEEEEECCCCCCEEECCCEEEECCCCC LRYSSLDYAIALSSDFTGATFTGASIENWKISNDTKFDEVDCAYVYLKSSQRDRHPLAGD CEECCCCEEEEECCCCCCCEEECCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC FISGEFINLIQKPLGTIDLLFLHGIDWLAFVAAFQALTKEFEQCDIEIQAIEKKSGGAFT CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEE VRLEVPIDANYEAIEAQAKQHYSAQLKAIERRYKSQLNATDVELKIYRQKNADIKEITKL EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHH LAVRPLKARNKAALQHQPNLRVPS HHCCCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]