| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337757
Identifier: 158337757
GI number: 158337757
Start: 4674677
End: 4676266
Strand: Reverse
Name: 158337757
Synonym: AM1_4640
Alternate gene names: NA
Gene position: 4676266-4674677 (Counterclockwise)
Preceding gene: 158337758
Following gene: 158337753
Centisome position: 71.9
GC content: 48.87
Gene sequence:
>1590_bases ATGACTCTTGGTTATCTTGCCCTGGTACTTCATGCTCATCTTCCCTTTGTTCGTCACCCTGAAAGTGATTTTGTCCTAGA GGAAGAGTGGCTATTTGAGGCAATTACTGAAACCTATATCCCTTTACTCCAAGTCTTCTCAGGATTAAAGCGAGATGGGA TTGATTTCAAAATCACCATGAGCATGACTCCTCCCTTGGTGTCTATGCTGCAAGATCCCCTCCTCCAAGATCGGTACGAT GAACATCTTGCGAAATTAGAAGAGCTGGCCACCCTAGAAGTTGAGCGCAATGTTCACAATAGCCATATCCGCTACTTGGC CGAGCACTATGTCAATGAATTCCATACAGTGCGAGAGGTATGGGAGAACTACAATCGCGATGTAGTGTCAGCCTTTAAAC AGTTTCAAGACACGAACAACCTAGAAATTATTACCTGCGGGGCCACCCACGGTTATTTACCCCTGATGAAAATGTATCCT CAGGCGGTTTGGGCTCAACTACAGGTCGCTTGCGAGCATTACGAAGAGACGTTTGGACGCCCTCCTAAGGGCATTTGGCT GCCAGAATGCGCCTATTTTGAGGGACTGGAGCGGATGCTAGCCGATGCCGGGTTGCGCTACTTCCTGATGGATGGTCATG GCTTGCTCTATGCCAGGCCTCGCCCCCGCTTTGGCACCTATGCGCCTATTTTTACAGAAACAGGGGTGGCGGCCTTTGGC CGTGATCATGAATCCTCCCAGCAGGTGTGGTCCTCCGAGGTGGGTTATCCGGGAGCACCGGAATATCGAGAGTTTTATAA AGATCTCGGCTGGGAAGCAGAGTACGAATATATCAAGCCCTACATTATGCCCAACGGCCAGCGCAAAAATGTCGGGATAA AGTATCACAAAATTACAGGACGCGGTGGGGGTCTTTCCGATAAAGCGCTTTATGATCCCTATTGGGCGCGGGAAAAAGCG GCAGAACATGCCCATAACTTTATGTTTAATCGGGAACAGCAAATCAGAAATTTGCAGGGGATGATGCAGCGCCCGCCCAT TGTGGTTTCCCCCTACGATGCCGAACTCTATGGCCACTGGTGGTATGAAGGGCCTTGGTTTATTGATTATCTATTCCGAA AGTCCTGGCATGATCAACAGACTTATGAAATGACTCACTTGGCGGATTACTTGAAAGCGCAGCCGAATCAACAAGTTTGT CGCCCTTCCCAGTCCAGTTGGGGGTACAAGGGATTTCATGAGTACTGGCTCAATGAGACCAATGCCTGGATTTATCCCCA TCTTCATAAGGCTGCCGAACGAATGATTGAATTGGCTAAATTGGAGCCTGAAGATGATCTGCAATGGCGAGCCTTAAATC AAGCGGCCCGAGAACTTTTGTTGGCTCAGTCTTCTGACTGGGCATTTATCATGCGAACGGGGACTATGGTTCCCTATGCG GTCCGCCGGACTCGGTCCCACTTGGCCCGATTCCAGCATCTCTACCATGAAATTAAAAAGCAACAGGTAGATAGTGGATG GCTGGAGAAAGTAGAAGTCATGGATAACATCTTTCCTAGCATTAACTATCGAGTCTATCGCCCTCTCTAG
Upstream 100 bases:
>100_bases GTATGTTTCTATCTATTCAATTGGGGCCGTCATTCTTTACTATTATTTAATACTCTCGGTCAATGGCCGTCGTCCCGTCT GCCCTTCCTAACGAAAATTT
Downstream 100 bases:
>100_bases AATTCTCGATTGGCAAAAATAATGGTGGAGATGGCTAGGAGTAAGGTGATATACACGATGCCATAGACCGCGTTCATGGC CATTTGTGAGGGCGGAATGG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MTLGYLALVLHAHLPFVRHPESDFVLEEEWLFEAITETYIPLLQVFSGLKRDGIDFKITMSMTPPLVSMLQDPLLQDRYD EHLAKLEELATLEVERNVHNSHIRYLAEHYVNEFHTVREVWENYNRDVVSAFKQFQDTNNLEIITCGATHGYLPLMKMYP QAVWAQLQVACEHYEETFGRPPKGIWLPECAYFEGLERMLADAGLRYFLMDGHGLLYARPRPRFGTYAPIFTETGVAAFG RDHESSQQVWSSEVGYPGAPEYREFYKDLGWEAEYEYIKPYIMPNGQRKNVGIKYHKITGRGGGLSDKALYDPYWAREKA AEHAHNFMFNREQQIRNLQGMMQRPPIVVSPYDAELYGHWWYEGPWFIDYLFRKSWHDQQTYEMTHLADYLKAQPNQQVC RPSQSSWGYKGFHEYWLNETNAWIYPHLHKAAERMIELAKLEPEDDLQWRALNQAARELLLAQSSDWAFIMRTGTMVPYA VRRTRSHLARFQHLYHEIKKQQVDSGWLEKVEVMDNIFPSINYRVYRPL
Sequences:
>Translated_529_residues MTLGYLALVLHAHLPFVRHPESDFVLEEEWLFEAITETYIPLLQVFSGLKRDGIDFKITMSMTPPLVSMLQDPLLQDRYD EHLAKLEELATLEVERNVHNSHIRYLAEHYVNEFHTVREVWENYNRDVVSAFKQFQDTNNLEIITCGATHGYLPLMKMYP QAVWAQLQVACEHYEETFGRPPKGIWLPECAYFEGLERMLADAGLRYFLMDGHGLLYARPRPRFGTYAPIFTETGVAAFG RDHESSQQVWSSEVGYPGAPEYREFYKDLGWEAEYEYIKPYIMPNGQRKNVGIKYHKITGRGGGLSDKALYDPYWAREKA AEHAHNFMFNREQQIRNLQGMMQRPPIVVSPYDAELYGHWWYEGPWFIDYLFRKSWHDQQTYEMTHLADYLKAQPNQQVC RPSQSSWGYKGFHEYWLNETNAWIYPHLHKAAERMIELAKLEPEDDLQWRALNQAARELLLAQSSDWAFIMRTGTMVPYA VRRTRSHLARFQHLYHEIKKQQVDSGWLEKVEVMDNIFPSINYRVYRPL >Mature_528_residues TLGYLALVLHAHLPFVRHPESDFVLEEEWLFEAITETYIPLLQVFSGLKRDGIDFKITMSMTPPLVSMLQDPLLQDRYDE HLAKLEELATLEVERNVHNSHIRYLAEHYVNEFHTVREVWENYNRDVVSAFKQFQDTNNLEIITCGATHGYLPLMKMYPQ AVWAQLQVACEHYEETFGRPPKGIWLPECAYFEGLERMLADAGLRYFLMDGHGLLYARPRPRFGTYAPIFTETGVAAFGR DHESSQQVWSSEVGYPGAPEYREFYKDLGWEAEYEYIKPYIMPNGQRKNVGIKYHKITGRGGGLSDKALYDPYWAREKAA EHAHNFMFNREQQIRNLQGMMQRPPIVVSPYDAELYGHWWYEGPWFIDYLFRKSWHDQQTYEMTHLADYLKAQPNQQVCR PSQSSWGYKGFHEYWLNETNAWIYPHLHKAAERMIELAKLEPEDDLQWRALNQAARELLLAQSSDWAFIMRTGTMVPYAV RRTRSHLARFQHLYHEIKKQQVDSGWLEKVEVMDNIFPSINYRVYRPL
Specific function: Unknown
COG id: COG1543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62447; Mature: 62315
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLGYLALVLHAHLPFVRHPESDFVLEEEWLFEAITETYIPLLQVFSGLKRDGIDFKITM CCHHHHHHHHHHCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE SMTPPLVSMLQDPLLQDRYDEHLAKLEELATLEVERNVHNSHIRYLAEHYVNEFHTVREV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH WENYNRDVVSAFKQFQDTNNLEIITCGATHGYLPLMKMYPQAVWAQLQVACEHYEETFGR HHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PPKGIWLPECAYFEGLERMLADAGLRYFLMDGHGLLYARPRPRFGTYAPIFTETGVAAFG CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCHHHCCCHHHHC RDHESSQQVWSSEVGYPGAPEYREFYKDLGWEAEYEYIKPYIMPNGQRKNVGIKYHKITG CCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHCCCEECCCCCCCCCCEEEEEEEC RGGGLSDKALYDPYWAREKAAEHAHNFMFNREQQIRNLQGMMQRPPIVVSPYDAELYGHW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCCCEEEEE WYEGPWFIDYLFRKSWHDQQTYEMTHLADYLKAQPNQQVCRPSQSSWGYKGFHEYWLNET ECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHCCCC NAWIYPHLHKAAERMIELAKLEPEDDLQWRALNQAARELLLAQSSDWAFIMRTGTMVPYA CCEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH VRRTRSHLARFQHLYHEIKKQQVDSGWLEKVEVMDNIFPSINYRVYRPL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCC >Mature Secondary Structure TLGYLALVLHAHLPFVRHPESDFVLEEEWLFEAITETYIPLLQVFSGLKRDGIDFKITM CHHHHHHHHHHCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE SMTPPLVSMLQDPLLQDRYDEHLAKLEELATLEVERNVHNSHIRYLAEHYVNEFHTVREV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH WENYNRDVVSAFKQFQDTNNLEIITCGATHGYLPLMKMYPQAVWAQLQVACEHYEETFGR HHHCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PPKGIWLPECAYFEGLERMLADAGLRYFLMDGHGLLYARPRPRFGTYAPIFTETGVAAFG CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCHHHCCCHHHHC RDHESSQQVWSSEVGYPGAPEYREFYKDLGWEAEYEYIKPYIMPNGQRKNVGIKYHKITG CCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHCCCEECCCCCCCCCCEEEEEEEC RGGGLSDKALYDPYWAREKAAEHAHNFMFNREQQIRNLQGMMQRPPIVVSPYDAELYGHW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCCCCEEEEE WYEGPWFIDYLFRKSWHDQQTYEMTHLADYLKAQPNQQVCRPSQSSWGYKGFHEYWLNET ECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHCCCC NAWIYPHLHKAAERMIELAKLEPEDDLQWRALNQAARELLLAQSSDWAFIMRTGTMVPYA CCEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH VRRTRSHLARFQHLYHEIKKQQVDSGWLEKVEVMDNIFPSINYRVYRPL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA