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The map label for this gene is ybhK [C]

Identifier: 158337758

GI number: 158337758

Start: 4676373

End: 4677764

Strand: Reverse

Name: ybhK [C]

Synonym: AM1_4642

Alternate gene names: 158337758

Gene position: 4677764-4676373 (Counterclockwise)

Preceding gene: 158337760

Following gene: 158337757

Centisome position: 71.92

GC content: 50.29

Gene sequence:

>1392_bases
ATGCTCATGGGATCTCCCAAACAGACGATAACTTCTTATAAAGGCAAATCGTTGCAGCATCTTCCCGGACGGTTAGGTCG
TTCCATTCGCTGGTTATCTCCTGGACTATCAATTAAACGGTGGTTATTTTTAAGCGCCATCGGTGTCCTCTTAACGAGTC
TAGGATTAGCCATCCTAGTCCGTTTAACCCCCATCTTTTATGTTATTCAGTTTCTCGAATCTGCACTCCGGTTCTTTGCC
CAAGTCTTACCCAGACAGATCAGTGGCCCTCTCGTAATCGTATTGGGTTTATTTTTAGTGTGGTGGGGGCAAACCCGAAC
TTTGGGGTCCATTACTGAAGTCTTAATCCCAGATAGCCAAGAAGAGGTTGTGGATCGCCTTCTCGTCCATCGCCGTTTGA
ATCGAGGCCCCAAAATTGTGGTGGTTGGGGGCGGAACCGGCTTGTCTACGTTGCTTCGAGGCTTGAAGTCTTATAGCTCA
AATATCACAGCCATCGTTACGGTGGCGGATGATGGTGGATCGTCGGGACGCCTAAGACGTGAAATTGGGGGTCTACCCCC
AGGGGATCTGCGTAACTGCATTGCCGCTTTAGCCGACCAAGAAAAATTGATCACAGCGCTATTCCAATATCGGTTTAAAG
CAGGAGATGGACTCGCTGGACATAGCTTTGGCAACTTGTTCCTAACGGCCATGAGTGAGATTACCGATAGTTGGGAACAA
GCCATTGCCGCAAGTTCCCAAGTGTTAGCCGTCCGGGGTCAGGTATTACCTGCCACCCTCAGCGACGTGAGCCTCTGGGC
AGATTTAGAAGATGGTCGCTGTATTGAGGGAGAATCCAATATTACGGCTGCAGGAGGCAGAATCATTCGTGTGGGCTGCA
CACCTGAGCGTCCGCCTGCTTTGCCTAAAGCTATTCGAGCGATTATTGATGCCGATCTCATCATTCTCGGCCCTGGAAGC
CTCTATACCAGCGTTGTCCCTAATCTTCTGGTGCCAGAAATCGTTGAGGCGATTGCCCGTCGAACGGTGCCTCGGATCTA
TGTCTGCAATATTATGAGTCAGCCTGGAGAAACGGATGGCTACACCGTTGCCGATCACATTAAGGCCCTCGATGCGGCCT
GCGGTAAGCGAGTCTTTGATGCCGTGCTAGTGCAAAAAAAATTACCCTCTTCCATGGCCCTAGCTCGCTATATGCAGGAA
AATGCCCATCCCATCGTGATAGACCGAGAAATGCTGATGCGGCTGGGGTGTCGGGTAATTCTGGCCAATGTTATGGATGA
AGATCAAAATACCAAGTATGTTCGCCATAGTCCCGAACGCTTAGCGCGGGTTTTACTGCGATGGTATGGGCGAGTTAACC
GGATGGAACACCCCACTCATGCATCAAGATAG

Upstream 100 bases:

>100_bases
CCTAAGCTATACTCAGGCCCTTGCCCCAACATCTCGACTTCAGGGTGAATAGGGACGGTTTTACCTCTCTATAATTTGGA
CATAAACACTTTTGTGGTTG

Downstream 100 bases:

>100_bases
AAAATTGTATGTTTCTATCTATTCAATTGGGGCCGTCATTCTTTACTATTATTTAATACTCTCGGTCAATGGCCGTCGTC
CCGTCTGCCCTTCCTAACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MLMGSPKQTITSYKGKSLQHLPGRLGRSIRWLSPGLSIKRWLFLSAIGVLLTSLGLAILVRLTPIFYVIQFLESALRFFA
QVLPRQISGPLVIVLGLFLVWWGQTRTLGSITEVLIPDSQEEVVDRLLVHRRLNRGPKIVVVGGGTGLSTLLRGLKSYSS
NITAIVTVADDGGSSGRLRREIGGLPPGDLRNCIAALADQEKLITALFQYRFKAGDGLAGHSFGNLFLTAMSEITDSWEQ
AIAASSQVLAVRGQVLPATLSDVSLWADLEDGRCIEGESNITAAGGRIIRVGCTPERPPALPKAIRAIIDADLIILGPGS
LYTSVVPNLLVPEIVEAIARRTVPRIYVCNIMSQPGETDGYTVADHIKALDAACGKRVFDAVLVQKKLPSSMALARYMQE
NAHPIVIDREMLMRLGCRVILANVMDEDQNTKYVRHSPERLARVLLRWYGRVNRMEHPTHASR

Sequences:

>Translated_463_residues
MLMGSPKQTITSYKGKSLQHLPGRLGRSIRWLSPGLSIKRWLFLSAIGVLLTSLGLAILVRLTPIFYVIQFLESALRFFA
QVLPRQISGPLVIVLGLFLVWWGQTRTLGSITEVLIPDSQEEVVDRLLVHRRLNRGPKIVVVGGGTGLSTLLRGLKSYSS
NITAIVTVADDGGSSGRLRREIGGLPPGDLRNCIAALADQEKLITALFQYRFKAGDGLAGHSFGNLFLTAMSEITDSWEQ
AIAASSQVLAVRGQVLPATLSDVSLWADLEDGRCIEGESNITAAGGRIIRVGCTPERPPALPKAIRAIIDADLIILGPGS
LYTSVVPNLLVPEIVEAIARRTVPRIYVCNIMSQPGETDGYTVADHIKALDAACGKRVFDAVLVQKKLPSSMALARYMQE
NAHPIVIDREMLMRLGCRVILANVMDEDQNTKYVRHSPERLARVLLRWYGRVNRMEHPTHASR
>Mature_463_residues
MLMGSPKQTITSYKGKSLQHLPGRLGRSIRWLSPGLSIKRWLFLSAIGVLLTSLGLAILVRLTPIFYVIQFLESALRFFA
QVLPRQISGPLVIVLGLFLVWWGQTRTLGSITEVLIPDSQEEVVDRLLVHRRLNRGPKIVVVGGGTGLSTLLRGLKSYSS
NITAIVTVADDGGSSGRLRREIGGLPPGDLRNCIAALADQEKLITALFQYRFKAGDGLAGHSFGNLFLTAMSEITDSWEQ
AIAASSQVLAVRGQVLPATLSDVSLWADLEDGRCIEGESNITAAGGRIIRVGCTPERPPALPKAIRAIIDADLIILGPGS
LYTSVVPNLLVPEIVEAIARRTVPRIYVCNIMSQPGETDGYTVADHIKALDAACGKRVFDAVLVQKKLPSSMALARYMQE
NAHPIVIDREMLMRLGCRVILANVMDEDQNTKYVRHSPERLARVLLRWYGRVNRMEHPTHASR

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=283, Percent_Identity=35.6890459363958, Blast_Score=154, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 50720; Mature: 50720

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMGSPKQTITSYKGKSLQHLPGRLGRSIRWLSPGLSIKRWLFLSAIGVLLTSLGLAILV
CCCCCCHHHHHHCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLTPIFYVIQFLESALRFFAQVLPRQISGPLVIVLGLFLVWWGQTRTLGSITEVLIPDSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCH
EEVVDRLLVHRRLNRGPKIVVVGGGTGLSTLLRGLKSYSSNITAIVTVADDGGSSGRLRR
HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHH
EIGGLPPGDLRNCIAALADQEKLITALFQYRFKAGDGLAGHSFGNLFLTAMSEITDSWEQ
HHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AIAASSQVLAVRGQVLPATLSDVSLWADLEDGRCIEGESNITAAGGRIIRVGCTPERPPA
HHHHCCCEEEECCCCCCCHHHHHHHEEECCCCCEECCCCCEEECCCEEEEECCCCCCCCC
LPKAIRAIIDADLIILGPGSLYTSVVPNLLVPEIVEAIARRTVPRIYVCNIMSQPGETDG
HHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
YTVADHIKALDAACGKRVFDAVLVQKKLPSSMALARYMQENAHPIVIDREMLMRLGCRVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHH
LANVMDEDQNTKYVRHSPERLARVLLRWYGRVNRMEHPTHASR
HHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLMGSPKQTITSYKGKSLQHLPGRLGRSIRWLSPGLSIKRWLFLSAIGVLLTSLGLAILV
CCCCCCHHHHHHCCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLTPIFYVIQFLESALRFFAQVLPRQISGPLVIVLGLFLVWWGQTRTLGSITEVLIPDSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCH
EEVVDRLLVHRRLNRGPKIVVVGGGTGLSTLLRGLKSYSSNITAIVTVADDGGSSGRLRR
HHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHH
EIGGLPPGDLRNCIAALADQEKLITALFQYRFKAGDGLAGHSFGNLFLTAMSEITDSWEQ
HHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
AIAASSQVLAVRGQVLPATLSDVSLWADLEDGRCIEGESNITAAGGRIIRVGCTPERPPA
HHHHCCCEEEECCCCCCCHHHHHHHEEECCCCCEECCCCCEEECCCEEEEECCCCCCCCC
LPKAIRAIIDADLIILGPGSLYTSVVPNLLVPEIVEAIARRTVPRIYVCNIMSQPGETDG
HHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC
YTVADHIKALDAACGKRVFDAVLVQKKLPSSMALARYMQENAHPIVIDREMLMRLGCRVI
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHH
LANVMDEDQNTKYVRHSPERLARVLLRWYGRVNRMEHPTHASR
HHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]