| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158336812
Identifier: 158336812
GI number: 158336812
Start: 3732924
End: 3733496
Strand: Direct
Name: 158336812
Synonym: AM1_3680
Alternate gene names: NA
Gene position: 3732924-3733496 (Clockwise)
Preceding gene: 158336808
Following gene: 158336813
Centisome position: 57.4
GC content: 49.21
Gene sequence:
>573_bases ATGGCTGTATTTGCAACTGAGCGAGTGCCTGACGTCGTCTTCAAGACCCGAGTTCGTGATGAGTCCGTTCCAGGACCCAA TCCCTATCGATGGCAAGATAAAACCACCCAAGATATTTTTGGTGGCAAGCGGGTTGTTCTGTTCTCCCTGCCAGGTGCAT TTACCCCCACCTGTTCATCGACTCACTTACCTCGCTATGAAGAGCTTCATGAAGAAATCAAAGCTCAAGGCGTTGACGAG ATTATCTGTCTATCGGTGAATGATGCTTTTGTAATGTTCCAATGGGGTAAGCATCAAGGGGCGGATAAAGTCTTTTTGCT ACCCGATGGCAATGGTGAATTCACCCGCAAGATGGGGATGTTGGTGGACAAGTCTAATCTAGGCTTTGGTATGCGTTCCT GGCGCTATTCGATGGTGGTCAATAACGGCCAAATCGAAAAAATGTTTATTGAAGCCGACTATGGCGACAACTGCCCCACG GATCCCTTTGAGGTGTCTGATGCCGACACGATGTTGGCCTATCTCAAAGGTGTACACGCCACTGCAGCTCCTACTGCAGC AGCAGTGGGCTAA
Upstream 100 bases:
>100_bases TAAGTATATATTACTATTGAAATATTCTTAAATAAGAATTATTCTTAGATATGTGGAGGCGATTGCCGACACCTGTTCAC CCCAACACATGAGGAAAAAC
Downstream 100 bases:
>100_bases ATCGGCCTGATGTCACAGTCTGGAGTTGGTCACCGAGCCAGCTCCAGTGTGCCATGCATTGATTAGGCTAAAGTGAAACG TGATTGAATCTGCAAAGGAG
Product: peroxiredoxin
Products: NA
Alternate protein names: Thioredoxin reductase [H]
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MAVFATERVPDVVFKTRVRDESVPGPNPYRWQDKTTQDIFGGKRVVLFSLPGAFTPTCSSTHLPRYEELHEEIKAQGVDE IICLSVNDAFVMFQWGKHQGADKVFLLPDGNGEFTRKMGMLVDKSNLGFGMRSWRYSMVVNNGQIEKMFIEADYGDNCPT DPFEVSDADTMLAYLKGVHATAAPTAAAVG
Sequences:
>Translated_190_residues MAVFATERVPDVVFKTRVRDESVPGPNPYRWQDKTTQDIFGGKRVVLFSLPGAFTPTCSSTHLPRYEELHEEIKAQGVDE IICLSVNDAFVMFQWGKHQGADKVFLLPDGNGEFTRKMGMLVDKSNLGFGMRSWRYSMVVNNGQIEKMFIEADYGDNCPT DPFEVSDADTMLAYLKGVHATAAPTAAAVG >Mature_189_residues AVFATERVPDVVFKTRVRDESVPGPNPYRWQDKTTQDIFGGKRVVLFSLPGAFTPTCSSTHLPRYEELHEEIKAQGVDEI ICLSVNDAFVMFQWGKHQGADKVFLLPDGNGEFTRKMGMLVDKSNLGFGMRSWRYSMVVNNGQIEKMFIEADYGDNCPTD PFEVSDADTMLAYLKGVHATAAPTAAAVG
Specific function: Unknown
COG id: COG0678
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI6912238, Length=134, Percent_Identity=45.5223880597015, Blast_Score=110, Evalue=9e-25, Organism=Drosophila melanogaster, GI78706776, Length=120, Percent_Identity=52.5, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI78709078, Length=120, Percent_Identity=52.5, Blast_Score=125, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013740 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF08534 Redoxin [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 21105; Mature: 20974
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFATERVPDVVFKTRVRDESVPGPNPYRWQDKTTQDIFGGKRVVLFSLPGAFTPTCSS CCEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCC THLPRYEELHEEIKAQGVDEIICLSVNDAFVMFQWGKHQGADKVFLLPDGNGEFTRKMGM CCCCCHHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCHHHHHHCE LVDKSNLGFGMRSWRYSMVVNNGQIEKMFIEADYGDNCPTDPFEVSDADTMLAYLKGVHA EEECCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCC TAAPTAAAVG CCCCCHHCCC >Mature Secondary Structure AVFATERVPDVVFKTRVRDESVPGPNPYRWQDKTTQDIFGGKRVVLFSLPGAFTPTCSS CEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCC THLPRYEELHEEIKAQGVDEIICLSVNDAFVMFQWGKHQGADKVFLLPDGNGEFTRKMGM CCCCCHHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCHHHHHHCE LVDKSNLGFGMRSWRYSMVVNNGQIEKMFIEADYGDNCPTDPFEVSDADTMLAYLKGVHA EEECCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCC TAAPTAAAVG CCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]