Click here to switch to the map view.

The map label for this gene is ydjZ [C]

Identifier: 158336783

GI number: 158336783

Start: 3707926

End: 3708540

Strand: Direct

Name: ydjZ [C]

Synonym: AM1_3651

Alternate gene names: 158336783

Gene position: 3707926-3708540 (Clockwise)

Preceding gene: 158336782

Following gene: 158336786

Centisome position: 57.01

GC content: 49.76

Gene sequence:

>615_bases
ATGACCGATTACCTGCCTTCTCTGAGCTTGCAAGTATTCACTGTCGAGGGTTTTCAGAACCTTGTAAACCAGATAGGTCC
TTGGGGACCCATCGCTTACATTGGATTGTTGATTATTTCGGTGGTGGCCAGTCAGATTCCGGGTGCACCGCTTGCGATCT
CAGCTGGCGTATTGTGGGGACCCTTAACGGCAGGTGTGTATACCATCATCGGCGGATTTTTAGGAGCAGTCCTCGCTTAT
GGCTTAGGCAAGTACCTGGGACAATCCTTCTTGCAAACCCTAACAGGTAAGAGGATTACTATTTCCCCCGATTTAGCCAC
AAATCTGATGGGCTGGTTTATTTTTGTCAGCCGTTTACTCCCGGTGCTCTCCTTCGATTTAGTGAGCTATGGAGCCGGAA
TGGCTGGTTTGTCATTCCCCATTTATGCTGCGGCGACATTGGTGGGCATGATTCCATCCACGCTTCTCCTAACCTATATG
GGCGGTATCGTTGATCCATCTCAGATGCTTGGACTTACTGGCTTACTGTTGGTAAGCATCATTGGTCTCCCGATTGTCGT
CGTTCGTCTGACGGGTGACCGCCTCACCACGCTAGTCAAAATTGAGTCCGCATAA

Upstream 100 bases:

>100_bases
CTCCTTGGCCCTGAAATCGAGTCTGAATCAGAAACACTATGGACCCGCCTCTCCCTGGTTCTGGATTGTAGCCGTAGTCG
GGAGCCTTGGTGTTTTAGCG

Downstream 100 bases:

>100_bases
GGATATAACGTTTAGGCCTTATGGCGTCGGTGTTTTGCGTGAGCCCTTACGACTACTTTGCCAAGTTGCAAATATCAGGC
ATGCTAGGCCCACATTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTDYLPSLSLQVFTVEGFQNLVNQIGPWGPIAYIGLLIISVVASQIPGAPLAISAGVLWGPLTAGVYTIIGGFLGAVLAY
GLGKYLGQSFLQTLTGKRITISPDLATNLMGWFIFVSRLLPVLSFDLVSYGAGMAGLSFPIYAAATLVGMIPSTLLLTYM
GGIVDPSQMLGLTGLLLVSIIGLPIVVVRLTGDRLTTLVKIESA

Sequences:

>Translated_204_residues
MTDYLPSLSLQVFTVEGFQNLVNQIGPWGPIAYIGLLIISVVASQIPGAPLAISAGVLWGPLTAGVYTIIGGFLGAVLAY
GLGKYLGQSFLQTLTGKRITISPDLATNLMGWFIFVSRLLPVLSFDLVSYGAGMAGLSFPIYAAATLVGMIPSTLLLTYM
GGIVDPSQMLGLTGLLLVSIIGLPIVVVRLTGDRLTTLVKIESA
>Mature_203_residues
TDYLPSLSLQVFTVEGFQNLVNQIGPWGPIAYIGLLIISVVASQIPGAPLAISAGVLWGPLTAGVYTIIGGFLGAVLAYG
LGKYLGQSFLQTLTGKRITISPDLATNLMGWFIFVSRLLPVLSFDLVSYGAGMAGLSFPIYAAATLVGMIPSTLLLTYMG
GIVDPSQMLGLTGLLLVSIIGLPIVVVRLTGDRLTTLVKIESA

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=164, Percent_Identity=25.609756097561, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21362; Mature: 21231

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDYLPSLSLQVFTVEGFQNLVNQIGPWGPIAYIGLLIISVVASQIPGAPLAISAGVLWG
CCCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCHHHH
PLTAGVYTIIGGFLGAVLAYGLGKYLGQSFLQTLTGKRITISPDLATNLMGWFIFVSRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH
PVLSFDLVSYGAGMAGLSFPIYAAATLVGMIPSTLLLTYMGGIVDPSQMLGLTGLLLVSI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IGLPIVVVRLTGDRLTTLVKIESA
HHHHHEEEEECCCCEEEEEEEECC
>Mature Secondary Structure 
TDYLPSLSLQVFTVEGFQNLVNQIGPWGPIAYIGLLIISVVASQIPGAPLAISAGVLWG
CCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCHHHH
PLTAGVYTIIGGFLGAVLAYGLGKYLGQSFLQTLTGKRITISPDLATNLMGWFIFVSRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH
PVLSFDLVSYGAGMAGLSFPIYAAATLVGMIPSTLLLTYMGGIVDPSQMLGLTGLLLVSI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IGLPIVVVRLTGDRLTTLVKIESA
HHHHHEEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]