| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is trx [C]
Identifier: 158335711
GI number: 158335711
Start: 2596862
End: 2597179
Strand: Reverse
Name: trx [C]
Synonym: AM1_2561
Alternate gene names: 158335711
Gene position: 2597179-2596862 (Counterclockwise)
Preceding gene: 158335712
Following gene: 158335708
Centisome position: 39.93
GC content: 47.48
Gene sequence:
>318_bases ATGGCCACAAAAAAGCAATACAAAAATTTTGCCGAACTTTTAGCTGGATCTGATAAACCTGTCCTAGTCGATTTCTATGC AATTTGGTGTGGGCCTTGTCGGATGTTGGTCCCCATCCTGGAGCAGGTCAGCACCTTGTTGAAAGATAAGGTCCAAGTGG TCAAAATTGATACCGAGCGTTACCCAGAGCTGGCAACGGAATACCATATCCATGCCTTGCCGACCCTCGTGTTATTTAAG GATGGTCAACCCGTGGAACGGATTGAAGGGGTCTTACCGCCGGAAGATATTGTCAGTCGCGTACAGCCTTTACTCTAG
Upstream 100 bases:
>100_bases ATCTTAGGGTTACACCTAAACCTGAAATGAATAACGACATCCCTGCCAATGCCTAAATTCTGGGTCTAGGATTGAAAAGA TTCCTACCTAGACTCTCCCT
Downstream 100 bases:
>100_bases TCATTTGCGGCGTTTAGAGATCCTTGAGGAGCGAGAAAAAGTCGGTCGCTACAGTCTGTTGTTCAAGTTCTTGGCTACCG AGAAGCTTGAGGACAATGTT
Product: thioredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MATKKQYKNFAELLAGSDKPVLVDFYAIWCGPCRMLVPILEQVSTLLKDKVQVVKIDTERYPELATEYHIHALPTLVLFK DGQPVERIEGVLPPEDIVSRVQPLL
Sequences:
>Translated_105_residues MATKKQYKNFAELLAGSDKPVLVDFYAIWCGPCRMLVPILEQVSTLLKDKVQVVKIDTERYPELATEYHIHALPTLVLFK DGQPVERIEGVLPPEDIVSRVQPLL >Mature_104_residues ATKKQYKNFAELLAGSDKPVLVDFYAIWCGPCRMLVPILEQVSTLLKDKVQVVKIDTERYPELATEYHIHALPTLVLFKD GQPVERIEGVLPPEDIVSRVQPLL
Specific function: Efficient Electron Donor For The Essential Enzyme Ribonucleotide Reductase. Is Also Able To Reduce The Interchain Disulfide Bridges Of Insulin. [C]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=83, Percent_Identity=38.5542168674699, Blast_Score=75, Evalue=1e-14, Organism=Homo sapiens, GI4758304, Length=97, Percent_Identity=38.1443298969072, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788936, Length=76, Percent_Identity=44.7368421052632, Blast_Score=83, Evalue=3e-18, Organism=Escherichia coli, GI87082331, Length=76, Percent_Identity=40.7894736842105, Blast_Score=76, Evalue=5e-16, Organism=Caenorhabditis elegans, GI212646193, Length=98, Percent_Identity=37.7551020408163, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71998175, Length=80, Percent_Identity=36.25, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71980562, Length=78, Percent_Identity=32.0512820512821, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71980565, Length=78, Percent_Identity=32.0512820512821, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17509965, Length=73, Percent_Identity=35.6164383561644, Blast_Score=65, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17569137, Length=81, Percent_Identity=35.8024691358025, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI32566189, Length=81, Percent_Identity=35.8024691358025, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193209454, Length=81, Percent_Identity=35.8024691358025, Blast_Score=62, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6321648, Length=89, Percent_Identity=34.8314606741573, Blast_Score=75, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323072, Length=90, Percent_Identity=37.7777777777778, Blast_Score=74, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6319925, Length=84, Percent_Identity=42.8571428571429, Blast_Score=72, Evalue=1e-14, Organism=Drosophila melanogaster, GI17648013, Length=80, Percent_Identity=42.5, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24583090, Length=80, Percent_Identity=42.5, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI28573567, Length=88, Percent_Identity=37.5, Blast_Score=80, Evalue=3e-16, Organism=Drosophila melanogaster, GI24639826, Length=79, Percent_Identity=35.4430379746835, Blast_Score=73, Evalue=3e-14, Organism=Drosophila melanogaster, GI24664269, Length=96, Percent_Identity=37.5, Blast_Score=73, Evalue=4e-14, Organism=Drosophila melanogaster, GI17530795, Length=77, Percent_Identity=31.1688311688312, Blast_Score=65, Evalue=7e-12, Organism=Drosophila melanogaster, GI21358065, Length=89, Percent_Identity=35.9550561797753, Blast_Score=64, Evalue=1e-11, Organism=Drosophila melanogaster, GI17647799, Length=81, Percent_Identity=39.5061728395062, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 11918; Mature: 11787
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKKQYKNFAELLAGSDKPVLVDFYAIWCGPCRMLVPILEQVSTLLKDKVQVVKIDTER CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHH YPELATEYHIHALPTLVLFKDGQPVERIEGVLPPEDIVSRVQPLL CHHHHHHHHHHHHCEEEEECCCCCHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure ATKKQYKNFAELLAGSDKPVLVDFYAIWCGPCRMLVPILEQVSTLLKDKVQVVKIDTER CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHH YPELATEYHIHALPTLVLFKDGQPVERIEGVLPPEDIVSRVQPLL CHHHHHHHHHHHHCEEEEECCCCCHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]