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The map label for this gene is yjcF [C]

Identifier: 158335471

GI number: 158335471

Start: 2318913

End: 2320421

Strand: Direct

Name: yjcF [C]

Synonym: AM1_2320

Alternate gene names: 158335471

Gene position: 2318913-2320421 (Clockwise)

Preceding gene: 158335463

Following gene: 158335473

Centisome position: 35.66

GC content: 45.59

Gene sequence:

>1509_bases
ATGATTAAACGTGGTGTTAATCATTGGAATCAGTGGCGTAAACAAAATCCTAGGGTCAAACCAGATTTAAGTGGTATAGA
CCTGAGTGAACAGGATTTAAAAGATATTAATTTAATCAATGCTAATTTGAGTCGGGCCAATCTCAGCTTGGCCAACTTGA
GCGGTGCTTTTTTAGCCGGTAGTGATCTCAGTGATGCCTTCTTAAGCGAAGCTAATCTCAGTCGCGTTAATTTTAGTCGG
GCCGATTTAACAAAAGCAGATTTAAGTTTTGCCCGGTTACAGGGTGCCACGCTCATTGAAGCAACCCTCTACCAAGCCAT
TTTGATTGAAGCCTGTATGGTTCAGGTTATCTTCCCCTATGCCGATCTAAGACAAGTCAATCTGAGTAAAGCAGACTTAT
CAGAAGCCAACGGGATTAAGGCCAATTTGACCCAGGCAAAGTTAGACTCAACCCAATTGCAACAGAGCAATTTAAGTCGG
GCTTTCATGAGTGAAGCTAGCTTAAAGGGGGCTAATTTAAAAGGCGCTAATTTGAGCAAAACAGACTTGAGTTTCTCTAA
CTTAAGCTCAGCCCTTTTACGAGATGCCAATTTAGGTAAAAGCATTGCGATTGAGGCAAATTTTAGAGGCGCTGATTTAC
GCAATACAAATTTCAAGAACGGACAATGCGTAAAAGCAAACTTTAGTCGAGTGGATGGTTGTGAAGTAGACTTGTCCTCC
GCTAATTTAACAGGCGTCGATCTGAGTGATGCCGATCTGCAGCAAGCGGTGCTCAAGGAAGCGAATCTCCGGGACGTCAA
CTTCACTCGCTGTCGTCTATTTGGCACTAATTTTGCCGCGGCTACCCTGACGGGGGCTTGCATAGAAGATATCAGCCCTA
ATGCCACCACCACTTTAGTAGATGTTGTCTGTGACTATGCCTATCAACGCCACAATCAGCAGGAACGCATCCCCAAACAA
GGCTATTTTGAGCCTGGAGACGTAAAAACCTTTTTTACTGAAGCTCAAGCCACCCTTAATTTGGGGCTACCTAAGGATGT
CCATTGGGCCGCGCTAACGTACAGTCTCCAATGGTTGCAAATCCAACCCGACTGCCAACCCGTCAAAATTCAGCGGTTAG
AACACAATCCAGATGGCACTGTTTTGCTGAGATTGGCTATCGCGACCAGCATTGACAAGGAACGCCTGCAGCTAGATCTT
TGGCGAGTCTATGAAGAAACCTACATGATGCTAGAGCCTGAGGATGGTCAACCCTTAGCAAAGCCGTTACCCAGTATTGA
TCCTCAACAATACGGTCATCACGAGTCTATTAATCGCTTATTTGATTTCCTCACATTGATGATGGAGGCGATTACCCCTA
ATGGAGCCGTGATTAACAACCATGACCTCGCGGTATCACGCAATGGGAGCAACATCCACGACGGTCAGACATTCCCCGAG
CTCGCGGTCACTAATTCTTTACTGCAGGGGGAGATGGCAGATACCTTACAACAACCCCATACTCTCTAA

Upstream 100 bases:

>100_bases
GACAACTAGTCAATCCACAGGATCAAAAGACAGAGGTTAAAGACATTGATGACTATTTATTTGCTTATCCCCCGCTATGG
CCAATACTAACCATGTCCGT

Downstream 100 bases:

>100_bases
TTCTTCTATGGCCTGAAGTCCTGTTGGATCTCCAAGCTTGAGTAAAGAACTCTTGGCATCCTCTTGAACACCGAGATCTT
CATCACTGAGGGCCTTGATC

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MIKRGVNHWNQWRKQNPRVKPDLSGIDLSEQDLKDINLINANLSRANLSLANLSGAFLAGSDLSDAFLSEANLSRVNFSR
ADLTKADLSFARLQGATLIEATLYQAILIEACMVQVIFPYADLRQVNLSKADLSEANGIKANLTQAKLDSTQLQQSNLSR
AFMSEASLKGANLKGANLSKTDLSFSNLSSALLRDANLGKSIAIEANFRGADLRNTNFKNGQCVKANFSRVDGCEVDLSS
ANLTGVDLSDADLQQAVLKEANLRDVNFTRCRLFGTNFAAATLTGACIEDISPNATTTLVDVVCDYAYQRHNQQERIPKQ
GYFEPGDVKTFFTEAQATLNLGLPKDVHWAALTYSLQWLQIQPDCQPVKIQRLEHNPDGTVLLRLAIATSIDKERLQLDL
WRVYEETYMMLEPEDGQPLAKPLPSIDPQQYGHHESINRLFDFLTLMMEAITPNGAVINNHDLAVSRNGSNIHDGQTFPE
LAVTNSLLQGEMADTLQQPHTL

Sequences:

>Translated_502_residues
MIKRGVNHWNQWRKQNPRVKPDLSGIDLSEQDLKDINLINANLSRANLSLANLSGAFLAGSDLSDAFLSEANLSRVNFSR
ADLTKADLSFARLQGATLIEATLYQAILIEACMVQVIFPYADLRQVNLSKADLSEANGIKANLTQAKLDSTQLQQSNLSR
AFMSEASLKGANLKGANLSKTDLSFSNLSSALLRDANLGKSIAIEANFRGADLRNTNFKNGQCVKANFSRVDGCEVDLSS
ANLTGVDLSDADLQQAVLKEANLRDVNFTRCRLFGTNFAAATLTGACIEDISPNATTTLVDVVCDYAYQRHNQQERIPKQ
GYFEPGDVKTFFTEAQATLNLGLPKDVHWAALTYSLQWLQIQPDCQPVKIQRLEHNPDGTVLLRLAIATSIDKERLQLDL
WRVYEETYMMLEPEDGQPLAKPLPSIDPQQYGHHESINRLFDFLTLMMEAITPNGAVINNHDLAVSRNGSNIHDGQTFPE
LAVTNSLLQGEMADTLQQPHTL
>Mature_502_residues
MIKRGVNHWNQWRKQNPRVKPDLSGIDLSEQDLKDINLINANLSRANLSLANLSGAFLAGSDLSDAFLSEANLSRVNFSR
ADLTKADLSFARLQGATLIEATLYQAILIEACMVQVIFPYADLRQVNLSKADLSEANGIKANLTQAKLDSTQLQQSNLSR
AFMSEASLKGANLKGANLSKTDLSFSNLSSALLRDANLGKSIAIEANFRGADLRNTNFKNGQCVKANFSRVDGCEVDLSS
ANLTGVDLSDADLQQAVLKEANLRDVNFTRCRLFGTNFAAATLTGACIEDISPNATTTLVDVVCDYAYQRHNQQERIPKQ
GYFEPGDVKTFFTEAQATLNLGLPKDVHWAALTYSLQWLQIQPDCQPVKIQRLEHNPDGTVLLRLAIATSIDKERLQLDL
WRVYEETYMMLEPEDGQPLAKPLPSIDPQQYGHHESINRLFDFLTLMMEAITPNGAVINNHDLAVSRNGSNIHDGQTFPE
LAVTNSLLQGEMADTLQQPHTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=155, Percent_Identity=36.7741935483871, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221377802, Length=158, Percent_Identity=36.0759493670886, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 55437; Mature: 55437

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRGVNHWNQWRKQNPRVKPDLSGIDLSEQDLKDINLINANLSRANLSLANLSGAFLAG
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEEEECCCCCCEEEEECCCCCEEEC
SDLSDAFLSEANLSRVNFSRADLTKADLSFARLQGATLIEATLYQAILIEACMVQVIFPY
CCCHHHHHHCCCCCCEECCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
ADLRQVNLSKADLSEANGIKANLTQAKLDSTQLQQSNLSRAFMSEASLKGANLKGANLSK
HHHHHCCCCHHHHHHCCCCEEECHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TDLSFSNLSSALLRDANLGKSIAIEANFRGADLRNTNFKNGQCVKANFSRVDGCEVDLSS
CCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECC
ANLTGVDLSDADLQQAVLKEANLRDVNFTRCRLFGTNFAAATLTGACIEDISPNATTTLV
CCEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHH
DVVCDYAYQRHNQQERIPKQGYFEPGDVKTFFTEAQATLNLGLPKDVHWAALTYSLQWLQ
HHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHEECCHHEEECCCCCCCEEEEEEEEEEEEE
IQPDCQPVKIQRLEHNPDGTVLLRLAIATSIDKERLQLDLWRVYEETYMMLEPEDGQPLA
ECCCCCCEEEEEEECCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHEEEEECCCCCHHH
KPLPSIDPQQYGHHESINRLFDFLTLMMEAITPNGAVINNHDLAVSRNGSNIHDGQTFPE
HCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCCCCCH
LAVTNSLLQGEMADTLQQPHTL
HHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIKRGVNHWNQWRKQNPRVKPDLSGIDLSEQDLKDINLINANLSRANLSLANLSGAFLAG
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEEEECCCCCCEEEEECCCCCEEEC
SDLSDAFLSEANLSRVNFSRADLTKADLSFARLQGATLIEATLYQAILIEACMVQVIFPY
CCCHHHHHHCCCCCCEECCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
ADLRQVNLSKADLSEANGIKANLTQAKLDSTQLQQSNLSRAFMSEASLKGANLKGANLSK
HHHHHCCCCHHHHHHCCCCEEECHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TDLSFSNLSSALLRDANLGKSIAIEANFRGADLRNTNFKNGQCVKANFSRVDGCEVDLSS
CCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECC
ANLTGVDLSDADLQQAVLKEANLRDVNFTRCRLFGTNFAAATLTGACIEDISPNATTTLV
CCEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHH
DVVCDYAYQRHNQQERIPKQGYFEPGDVKTFFTEAQATLNLGLPKDVHWAALTYSLQWLQ
HHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHEECCHHEEECCCCCCCEEEEEEEEEEEEE
IQPDCQPVKIQRLEHNPDGTVLLRLAIATSIDKERLQLDLWRVYEETYMMLEPEDGQPLA
ECCCCCCEEEEEEECCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHEEEEECCCCCHHH
KPLPSIDPQQYGHHESINRLFDFLTLMMEAITPNGAVINNHDLAVSRNGSNIHDGQTFPE
HCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCCCCCH
LAVTNSLLQGEMADTLQQPHTL
HHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA