Click here to switch to the map view.

The map label for this gene is 158334463

Identifier: 158334463

GI number: 158334463

Start: 1277762

End: 1278847

Strand: Direct

Name: 158334463

Synonym: AM1_1284

Alternate gene names: NA

Gene position: 1277762-1278847 (Clockwise)

Preceding gene: 158334461

Following gene: 158334464

Centisome position: 19.65

GC content: 48.9

Gene sequence:

>1086_bases
ATGCTAGACCTATTTATCATCTTGACCTTCATTGCTGTAGGTGCAGCAGTTGGTTTTCGGGGCGTCGATATCTTACCCGA
CCTGTTGACCCCCAGCGAATTAGAAGGGGTTAATATTGACGGTCTGCGGTGGGTAATTACGGGCTTTGGGGCCCTCCTCA
GTTTGGGTATCGGGTTCGCCGCTCAGGTCTCTTGCCGTCGAATTGAGAAAAAGATAAAAGCTTTACCCACGGATGTCTTA
CTCAGCCGATCAGCTGGTCTATTTCTGGGACTTTTAGTGGCCAATCTGATGTTGGCTCCTATCTTTTTATTCCCATTACC
TAAGGAGTTTGCATTTATTAAGCCCACGGCAGCGGTTTTGGGCAGTCTGATTTTTGCATTTTTGGGGTTAACCCTAGCCG
ACATTCATGGCCAAACCATTTTGCGGCTGATCAATCCCAATTCCATTGAAACCATGCTGTTGGCGGAAGGAACGCTACAA
CCGTCCCCAACGAAAGTTTTGGATACTAGCTGCATTATTGATGGCCGGATTGAGGGGCTATTGCTCACGGGATTCTTGGA
TGGCCAAATTTTGGTCCCTCGTTTTATTTTGCAAGAACTGCAAACCCTTGCCGATGCAGGCAATGACCAAAAACGGGCCC
GAGGGCGGAGAGGGTTAGATATTCTCAACCGTTTGCGCACAGAATATCCAGAACGGATCACCATACATCCTGCTGATTAC
GAGGATGTTTCTACCGTGGACGCGAAGCTGGTGCGACTGGCCCAGGATATCAACGCATCCATGGTCACCAATGACTACAA
CCTCAATAAAGTCGCCAGCGTCCAAAATATCCAGGTTCTAAATGTCAATGATTTGGCAAAGTCCCTACGACCAATTTATC
TACCCGGAGATAGCTTAGATCTCAAAATCATCAAGGCAGGTAAAGAGCCTGCCCAAGGGGTGGGGTATTTAGAAGATGGC
ACGATGGTGGTGGTAGAAGAAGCCAGCAACCATATTGGTGACAAGGTACCAGTCGTGGTGACTAGTGCGTTACAGACCTC
GGCAGGCCGCATGATTTTTGCCCGTCCGCAAACCGCTTGGGCCTAA

Upstream 100 bases:

>100_bases
GATTAGAGCTATTTTTCTCTGAGAAAATAAGAAGTTCGATAACCCACCCTTATTATCTCCAAAAAAGTATGCCTCTCCTA
TTAAACGGTAAGCTAGGACA

Downstream 100 bases:

>100_bases
TTCTCAGGAACCTGTTACTAGCGCTGAACAACCTGATATACTGGATTTTCAAATTTCATGCCGATGTAGCTCAGTGGTAG
AGCACTCGATTCGTAATCGA

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MLDLFIILTFIAVGAAVGFRGVDILPDLLTPSELEGVNIDGLRWVITGFGALLSLGIGFAAQVSCRRIEKKIKALPTDVL
LSRSAGLFLGLLVANLMLAPIFLFPLPKEFAFIKPTAAVLGSLIFAFLGLTLADIHGQTILRLINPNSIETMLLAEGTLQ
PSPTKVLDTSCIIDGRIEGLLLTGFLDGQILVPRFILQELQTLADAGNDQKRARGRRGLDILNRLRTEYPERITIHPADY
EDVSTVDAKLVRLAQDINASMVTNDYNLNKVASVQNIQVLNVNDLAKSLRPIYLPGDSLDLKIIKAGKEPAQGVGYLEDG
TMVVVEEASNHIGDKVPVVVTSALQTSAGRMIFARPQTAWA

Sequences:

>Translated_361_residues
MLDLFIILTFIAVGAAVGFRGVDILPDLLTPSELEGVNIDGLRWVITGFGALLSLGIGFAAQVSCRRIEKKIKALPTDVL
LSRSAGLFLGLLVANLMLAPIFLFPLPKEFAFIKPTAAVLGSLIFAFLGLTLADIHGQTILRLINPNSIETMLLAEGTLQ
PSPTKVLDTSCIIDGRIEGLLLTGFLDGQILVPRFILQELQTLADAGNDQKRARGRRGLDILNRLRTEYPERITIHPADY
EDVSTVDAKLVRLAQDINASMVTNDYNLNKVASVQNIQVLNVNDLAKSLRPIYLPGDSLDLKIIKAGKEPAQGVGYLEDG
TMVVVEEASNHIGDKVPVVVTSALQTSAGRMIFARPQTAWA
>Mature_361_residues
MLDLFIILTFIAVGAAVGFRGVDILPDLLTPSELEGVNIDGLRWVITGFGALLSLGIGFAAQVSCRRIEKKIKALPTDVL
LSRSAGLFLGLLVANLMLAPIFLFPLPKEFAFIKPTAAVLGSLIFAFLGLTLADIHGQTILRLINPNSIETMLLAEGTLQ
PSPTKVLDTSCIIDGRIEGLLLTGFLDGQILVPRFILQELQTLADAGNDQKRARGRRGLDILNRLRTEYPERITIHPADY
EDVSTVDAKLVRLAQDINASMVTNDYNLNKVASVQNIQVLNVNDLAKSLRPIYLPGDSLDLKIIKAGKEPAQGVGYLEDG
TMVVVEEASNHIGDKVPVVVTSALQTSAGRMIFARPQTAWA

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 39073; Mature: 39073

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLFIILTFIAVGAAVGFRGVDILPDLLTPSELEGVNIDGLRWVITGFGALLSLGIGFA
CHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH
AQVSCRRIEKKIKALPTDVLLSRSAGLFLGLLVANLMLAPIFLFPLPKEFAFIKPTAAVL
HHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHH
GSLIFAFLGLTLADIHGQTILRLINPNSIETMLLAEGTLQPSPTKVLDTSCIIDGRIEGL
HHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEECCCEEECCCCCEE
LLTGFLDGQILVPRFILQELQTLADAGNDQKRARGRRGLDILNRLRTEYPERITIHPADY
EEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCCEEEECCCCC
EDVSTVDAKLVRLAQDINASMVTNDYNLNKVASVQNIQVLNVNDLAKSLRPIYLPGDSLD
CHHHHHHHHHHHHHHHCCCEEEECCCCCCHHCCCCCEEEEEHHHHHHHCCCEEECCCCCE
LKIIKAGKEPAQGVGYLEDGTMVVVEEASNHIGDKVPVVVTSALQTSAGRMIFARPQTAW
EEEEECCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCEEEHHHHHCCCCEEEECCCCCC
A
C
>Mature Secondary Structure
MLDLFIILTFIAVGAAVGFRGVDILPDLLTPSELEGVNIDGLRWVITGFGALLSLGIGFA
CHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHH
AQVSCRRIEKKIKALPTDVLLSRSAGLFLGLLVANLMLAPIFLFPLPKEFAFIKPTAAVL
HHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHH
GSLIFAFLGLTLADIHGQTILRLINPNSIETMLLAEGTLQPSPTKVLDTSCIIDGRIEGL
HHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEECCCEEECCCCCEE
LLTGFLDGQILVPRFILQELQTLADAGNDQKRARGRRGLDILNRLRTEYPERITIHPADY
EEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCCEEEECCCCC
EDVSTVDAKLVRLAQDINASMVTNDYNLNKVASVQNIQVLNVNDLAKSLRPIYLPGDSLD
CHHHHHHHHHHHHHHHCCCEEEECCCCCCHHCCCCCEEEEEHHHHHHHCCCEEECCCCCE
LKIIKAGKEPAQGVGYLEDGTMVVVEEASNHIGDKVPVVVTSALQTSAGRMIFARPQTAW
EEEEECCCCCCCCCCEECCCCEEEEECCCCCCCCCCCCEEEHHHHHCCCCEEEECCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]