Click here to switch to the map view.

The map label for this gene is 158334464

Identifier: 158334464

GI number: 158334464

Start: 1279153

End: 1280337

Strand: Direct

Name: 158334464

Synonym: AM1_1286

Alternate gene names: NA

Gene position: 1279153-1280337 (Clockwise)

Preceding gene: 158334463

Following gene: 158334468

Centisome position: 19.67

GC content: 45.99

Gene sequence:

>1185_bases
ATGTACTCCACCGAACGCCGTAAGAAGGCCAAAACGGGCAGTGTGCAGATCCGCTGCAGCAACAATCGCCTACAGATCGT
GTTCAGTTTTGGAGGCAAACGTTATTTTGTCTCAACTGGCTTAGGAGATACCCCTTTTAATCGAAAGCAAGCACAAGATA
AAGCCTTAGAGGTTGAGCGTGATATCGCCTTCGGAGAGTTCGATCCTGACAACCTAGAAAAATATAAGGTTCAATCGGCG
CTCACAACCCCAGAAAAGGTCGTGAACATTACCGAGCCAAAATTGACTTTGACTGATTTATGGAGTCAGTACCTAAATTA
CAAAGCGCCCCAAGCATCACCCAAAACATTGAATGGAACCTATGAGCCTGTCACCGCTCACCTAGGTAGATGTTCAACCG
ATGGGTTAGAAGATGCCTTGAAATTCAGGCTAGAACTCCTGCAAGCAACAACCCAATCTCAAGCCCGACGAACCTTGATG
CAGTTGTCGGCAGCTTGTAAGTGGGCAATGAAGCATTCCCTGATTGAGGCCAATCCCTTTGATGGAATGTACAAAGAATT
AGAAGCAACTACGCCCCCTCCACCCATCGCTTTCACAGTAGAAGAACGAGATCGCATCATCACTGCCTTTGAAGAACATC
GAGGGAAAGGAATTAACTATCAGCATTACGCTCCCTTTGTTAAATTCCTGTTCTGGAGTGGTTGTCGTCCTTGCGAAGCG
ATTGGACTCCGCTGGGAAAGTGTGAACAAGACTTGCGATCGCATTCATTTCCACGAAAGCATCGTAGAAGTATCGGGTAA
GTTAGTTCGCCGAGAGGAAACCAAAACAGGTGTACAGCGATGGTTCAGCTGTACACCCAAACTGCAGAAACTACTATATT
CTATTCGTCCTGAAAATCCCCAGCCGGATGCACTAGTTTTTCCATCTTCGAAAGGCGGAATTATTCGTCCCAGCAATTTT
AAGGATCGAGCTTGGAATAAGATCTTGACCACGCTGAACCTGCAAGTAAAAGGTGGGATTAAGATGACTCCTTACAACTG
TCGAGATACCTTTATCACACTCCAAGCTGTTCACGGTAATTCCTCTACAACTATTGCCCGTTGGGTTGGTAATTCCAGCA
AAGTGATCGAAGAAAAGTACCTAGACAAACTCCAGTTGGAGAGTTTGAGACCGACCGAAGTGTAA

Upstream 100 bases:

>100_bases
CATTGGGCCTAGTTGGGTACCGTTAGACCTGTTTAGGGTACAGATTGAGATAAAGATTGAGATAAAATAGTAGAGTTATC
GATCAAATTATCTCAAGTAC

Downstream 100 bases:

>100_bases
TCCCTAGTCAGAGCCGGGCAACTGATAGGACGGCAGCGCACTGAGATGATTTGCGATCGCTTGGTTATGGAGCTGGGTAT
TATTTCGATTCATAGCCCAG

Product: phage integrase

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Integrase

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MYSTERRKKAKTGSVQIRCSNNRLQIVFSFGGKRYFVSTGLGDTPFNRKQAQDKALEVERDIAFGEFDPDNLEKYKVQSA
LTTPEKVVNITEPKLTLTDLWSQYLNYKAPQASPKTLNGTYEPVTAHLGRCSTDGLEDALKFRLELLQATTQSQARRTLM
QLSAACKWAMKHSLIEANPFDGMYKELEATTPPPPIAFTVEERDRIITAFEEHRGKGINYQHYAPFVKFLFWSGCRPCEA
IGLRWESVNKTCDRIHFHESIVEVSGKLVRREETKTGVQRWFSCTPKLQKLLYSIRPENPQPDALVFPSSKGGIIRPSNF
KDRAWNKILTTLNLQVKGGIKMTPYNCRDTFITLQAVHGNSSTTIARWVGNSSKVIEEKYLDKLQLESLRPTEV

Sequences:

>Translated_394_residues
MYSTERRKKAKTGSVQIRCSNNRLQIVFSFGGKRYFVSTGLGDTPFNRKQAQDKALEVERDIAFGEFDPDNLEKYKVQSA
LTTPEKVVNITEPKLTLTDLWSQYLNYKAPQASPKTLNGTYEPVTAHLGRCSTDGLEDALKFRLELLQATTQSQARRTLM
QLSAACKWAMKHSLIEANPFDGMYKELEATTPPPPIAFTVEERDRIITAFEEHRGKGINYQHYAPFVKFLFWSGCRPCEA
IGLRWESVNKTCDRIHFHESIVEVSGKLVRREETKTGVQRWFSCTPKLQKLLYSIRPENPQPDALVFPSSKGGIIRPSNF
KDRAWNKILTTLNLQVKGGIKMTPYNCRDTFITLQAVHGNSSTTIARWVGNSSKVIEEKYLDKLQLESLRPTEV
>Mature_394_residues
MYSTERRKKAKTGSVQIRCSNNRLQIVFSFGGKRYFVSTGLGDTPFNRKQAQDKALEVERDIAFGEFDPDNLEKYKVQSA
LTTPEKVVNITEPKLTLTDLWSQYLNYKAPQASPKTLNGTYEPVTAHLGRCSTDGLEDALKFRLELLQATTQSQARRTLM
QLSAACKWAMKHSLIEANPFDGMYKELEATTPPPPIAFTVEERDRIITAFEEHRGKGINYQHYAPFVKFLFWSGCRPCEA
IGLRWESVNKTCDRIHFHESIVEVSGKLVRREETKTGVQRWFSCTPKLQKLLYSIRPENPQPDALVFPSSKGGIIRPSNF
KDRAWNKILTTLNLQVKGGIKMTPYNCRDTFITLQAVHGNSSTTIARWVGNSSKVIEEKYLDKLQLESLRPTEV

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44895; Mature: 44895

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSTERRKKAKTGSVQIRCSNNRLQIVFSFGGKRYFVSTGLGDTPFNRKQAQDKALEVER
CCCCHHHHHCCCCCEEEEECCCEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHH
DIAFGEFDPDNLEKYKVQSALTTPEKVVNITEPKLTLTDLWSQYLNYKAPQASPKTLNGT
CCCCCCCCCCHHHHHHHHHHHCCHHHHEECCCCCEEHHHHHHHHHCCCCCCCCCCCCCCC
YEPVTAHLGRCSTDGLEDALKFRLELLQATTQSQARRTLMQLSAACKWAMKHSLIEANPF
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DGMYKELEATTPPPPIAFTVEERDRIITAFEEHRGKGINYQHYAPFVKFLFWSGCRPCEA
CHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHH
IGLRWESVNKTCDRIHFHESIVEVSGKLVRREETKTGVQRWFSCTPKLQKLLYSIRPENP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
QPDALVFPSSKGGIIRPSNFKDRAWNKILTTLNLQVKGGIKMTPYNCRDTFITLQAVHGN
CCCEEEEECCCCCEECCCCCCHHHHHHHHHEEEEEEECCEEECCCCCCCEEEEEEEEECC
SSTTIARWVGNSSKVIEEKYLDKLQLESLRPTEV
CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYSTERRKKAKTGSVQIRCSNNRLQIVFSFGGKRYFVSTGLGDTPFNRKQAQDKALEVER
CCCCHHHHHCCCCCEEEEECCCEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHH
DIAFGEFDPDNLEKYKVQSALTTPEKVVNITEPKLTLTDLWSQYLNYKAPQASPKTLNGT
CCCCCCCCCCHHHHHHHHHHHCCHHHHEECCCCCEEHHHHHHHHHCCCCCCCCCCCCCCC
YEPVTAHLGRCSTDGLEDALKFRLELLQATTQSQARRTLMQLSAACKWAMKHSLIEANPF
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DGMYKELEATTPPPPIAFTVEERDRIITAFEEHRGKGINYQHYAPFVKFLFWSGCRPCEA
CHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHH
IGLRWESVNKTCDRIHFHESIVEVSGKLVRREETKTGVQRWFSCTPKLQKLLYSIRPENP
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
QPDALVFPSSKGGIIRPSNFKDRAWNKILTTLNLQVKGGIKMTPYNCRDTFITLQAVHGN
CCCEEEEECCCCCEECCCCCCHHHHHHHHHEEEEEEECCEEECCCCCCCEEEEEEEEECC
SSTTIARWVGNSSKVIEEKYLDKLQLESLRPTEV
CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA