| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158319040
Identifier: 158319040
GI number: 158319040
Start: 8952575
End: 8955334
Strand: Direct
Name: 158319040
Synonym: Franean1_7323
Alternate gene names: NA
Gene position: 8952575-8955334 (Clockwise)
Preceding gene: 158319039
Following gene: 158319041
Centisome position: 99.67
GC content: 74.17
Gene sequence:
>2760_bases GTGACCGGCCGTAACCCGTTCCGCCGGCACCGGCTGGCGGCCGCGGCGCTGCTCGGGACCGTCGCGTTGGTCTGGCCCGG GGCCGATGTGGGCCTGGCGGCGGCTCCGCCCGACGGCGCACGAGCGCCCGCCGCCACGAGCATCACGAGCACCACGCTCG ATTCGCACAATCCACAGGCTTCATCCACAGTTTCCACAGGGCTGTCCACAGAGTTGTCCACAGGATCGGCCTCATCTGTG GGAATCTCGCCGGACAGCGCGGCGATCATCCAGCCGATAACCCGGACGAACCCCAGCACAAGCGGTACTTCGGGTACTCA ACAGACCACACCAAGCACCGGTGGGACCACGAACGGGACCACGGGCCTTCCCATCGAGGTCCGCCTCACCAGCCTCGTCA CCCCGAGCGCCGCCGCCCCCCAGCTCCGGGTGACCGGCACGGTCGACGTGGGCGGGACGGTGCTGCCGACCGACCTCGGT GTCGTCCTCGAGGTGGGCGGCCCGCTGCGGTCCCGGGGCGAGCTCGCCCAGCTGACCAGCGGCGGCCCGCCCCCCCAGAT CCGTTACTCACTGCTCGGCAGCGGGCCACTGACCATCAGCCCCACCGCGACGACCCCCGGCCAGTTCGCCGCGCAGGCGG ACGTCCCCGCGATGTTCCGCTCGTCGGCCGTGAGCGTGCGGCCGGTCCAGATCAGGATCGTCGGCCGGGTCGGCGAGCGC GCGCGGAGCACCGTCGCGTCGCTGACGACGTTCATAGTCGTCTCGCCCCCGCAGGCGGCGGCGCGGACGGCGGTCGTCAC CGTCCTGCCCGTCTCCAGCAAGCCCCGGCTGCGCTCGGACGGCCTGCTCACCGACGACACCCTCACCGACGAGATCCGCG ACGGCGGCCGGCTCGACGCGCTGCTCGACCCGCTCGAGTCCACCGCCCCCGGGACACCGCCGCCCCAGGTCGCCCTCGCG GTTGACCCCACGCTGGTACAGGCGTTGCAGCGGATGGAGACCCCCTACCAGTACGCCACACCCGGCGGAAGGAGGAATGC CGACCCCGACCCCGACGCGGGCGCCTTCCTCGACCGGATCAAGGACTTCGCGCGGCGGGGCGGCACCGTCATCGCCCTGC CCTACGGGGACACCGACCTGCCGGCCCTCGTCCGCGCCGACCAGCTCGACGCGCTGCAGTACTCGGTGAACACCGGCCAG CTCGTGATCGCCGGGCTGCTGGGCGGCAAGATCCCGAGAAGCGGCACGATCGCCTACCCCGCCGACGGCATCGCCGACCC ACACACCGTCGACGTGCTGAGTGCCAACGGCGCCGGCACGGTGATCGTCGACGACCGGCTGCTGCCCGCGGCCCAGTCCG TGCGGTACACCCCGTCCGCGGCGGTCACCCTGCCGACGTCCACCGGCCAGGTCCGCGTGCTCGCGGCGGACCACCGGCTG GCCGACGCGGTCGCCGGCTACGACGGCCAGCAGCTCCTGGAGCAGGCCCTCGCCCGGTTCCGCGCCGAGCTGGCGATGAT CACCGCTGAGCCGGCGAACGAGCGGGCCGCGGTGCTGGCCCTCCCGCGCGACTTCACGCCGCCCCCCGGCTGGCTCAACG CGATCCTGCGCAGCCTCGACAGCGCCTACTCCAGGCCGGTCGGCATCGAGGAGCCGTCCCCGGACGCCACCCGGCAGCGC GCCGGCCTGACCTACAACGCCGACGCGCAGAGCCGGGAGCTGCCGGTCGACTACGTGAAGGGCGTCGGGCAGATCCGCGG CGAGGTGGCCGTCCTCAGCGCGGCCTTCTGCCCGCCGACCACCCTGACCGGCGACCTGCTACAGCAGTGCCGTCTGGGCA AGGTCGACCCGATGCGCAACACGCTGATCACGGCGCTGTCGGCGTGGTGGCGGACGGACCGGCTCGGCGGGTTCTCCCTG GCCCAGCAGGCGGACGGGCAGGTCGGTGACTACCGGTCGAAGATCCGGGTCGTCGCGTCCCGGATCGTGAACCTCACCAG CAGCCGCGGACGGGTCCCGGTGACGCTGGAGAACGGTTCGGACTGGAATGTGACCGTGGTCCTGAAGCTCTCGTCCACCG ACCGGGGGCGGCTCGTGTCGGCGACCGAGGTCACCCGGGTTCTCGAACCGCTCCAGAAGGACCAGTTCGAGATCGAGGTG GACGCCGAGAGCGCCGGCACCTTCCCGGTGGACATCCGGCTCGAGACCGTCGACGGGCAGGCCCTGGGCCCGGATGCCGC CGCCCGGGTGCTGGTGCGCTCGACGGTCTACGGGGCCATCGCCACGGCGATCACGATCGGCGCGATCGGCGTGCTGATGC TGGCCGTGCTGATCCGCCTGCTACGCAAGCTCCGCGCGCGCTCCCGCGGCGGATCGGCGGCGGATGCGGCGGCCGCGGCC CCGCCCGACGGCTCCGGCCCGCCAGCCGGCGCCGGTCTCCTCGGCCCGGCCGGGGCGAACGGGGCCTCGGGCGCCGGCGA TCCCGACCACCCCGGCACGGGCGACGGGCCGTTCGATCCCCCCGGGACCGCCGGCCCCGGCTGGCCGGAGCGGCCCGTCG ACGATCCCGCGCCGGCCGGCCTCGGGCACGATCCCTACTTCGACGGACAACCCGCGCCCGCCGCGTACCGGGAGCCCACC GGCTCGCCGTACGGCCCGTCCACCGGTGGTCCCGGCGGCAGGACGGCCGAGCCGTGGTCCGGGCGTCCCGCGACCCCGGC CGGATCCGCGTCCCAGCCGCGGCGACGGGACGGCCGGTGA
Upstream 100 bases:
>100_bases AGGTCGCGTGGGTCCCGCTGCCCGAGGTGGCGCGACGGCTCGCGTACGCCGACGAACGACGGCTGCTCGACGGGGTGCCG ACGATCCTCGCCGACGCCTC
Downstream 100 bases:
>100_bases CCCCGCCGGACGAGTCGCGATGGCCGCCTGACGACGACCGCCACGGCACCCGGGACGGCCAGGGCACTCCCCGGTATCCG GACGACCGGTATCCGGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 919; Mature: 918
Protein sequence:
>919_residues MTGRNPFRRHRLAAAALLGTVALVWPGADVGLAAAPPDGARAPAATSITSTTLDSHNPQASSTVSTGLSTELSTGSASSV GISPDSAAIIQPITRTNPSTSGTSGTQQTTPSTGGTTNGTTGLPIEVRLTSLVTPSAAAPQLRVTGTVDVGGTVLPTDLG VVLEVGGPLRSRGELAQLTSGGPPPQIRYSLLGSGPLTISPTATTPGQFAAQADVPAMFRSSAVSVRPVQIRIVGRVGER ARSTVASLTTFIVVSPPQAAARTAVVTVLPVSSKPRLRSDGLLTDDTLTDEIRDGGRLDALLDPLESTAPGTPPPQVALA VDPTLVQALQRMETPYQYATPGGRRNADPDPDAGAFLDRIKDFARRGGTVIALPYGDTDLPALVRADQLDALQYSVNTGQ LVIAGLLGGKIPRSGTIAYPADGIADPHTVDVLSANGAGTVIVDDRLLPAAQSVRYTPSAAVTLPTSTGQVRVLAADHRL ADAVAGYDGQQLLEQALARFRAELAMITAEPANERAAVLALPRDFTPPPGWLNAILRSLDSAYSRPVGIEEPSPDATRQR AGLTYNADAQSRELPVDYVKGVGQIRGEVAVLSAAFCPPTTLTGDLLQQCRLGKVDPMRNTLITALSAWWRTDRLGGFSL AQQADGQVGDYRSKIRVVASRIVNLTSSRGRVPVTLENGSDWNVTVVLKLSSTDRGRLVSATEVTRVLEPLQKDQFEIEV DAESAGTFPVDIRLETVDGQALGPDAAARVLVRSTVYGAIATAITIGAIGVLMLAVLIRLLRKLRARSRGGSAADAAAAA PPDGSGPPAGAGLLGPAGANGASGAGDPDHPGTGDGPFDPPGTAGPGWPERPVDDPAPAGLGHDPYFDGQPAPAAYREPT GSPYGPSTGGPGGRTAEPWSGRPATPAGSASQPRRRDGR
Sequences:
>Translated_919_residues MTGRNPFRRHRLAAAALLGTVALVWPGADVGLAAAPPDGARAPAATSITSTTLDSHNPQASSTVSTGLSTELSTGSASSV GISPDSAAIIQPITRTNPSTSGTSGTQQTTPSTGGTTNGTTGLPIEVRLTSLVTPSAAAPQLRVTGTVDVGGTVLPTDLG VVLEVGGPLRSRGELAQLTSGGPPPQIRYSLLGSGPLTISPTATTPGQFAAQADVPAMFRSSAVSVRPVQIRIVGRVGER ARSTVASLTTFIVVSPPQAAARTAVVTVLPVSSKPRLRSDGLLTDDTLTDEIRDGGRLDALLDPLESTAPGTPPPQVALA VDPTLVQALQRMETPYQYATPGGRRNADPDPDAGAFLDRIKDFARRGGTVIALPYGDTDLPALVRADQLDALQYSVNTGQ LVIAGLLGGKIPRSGTIAYPADGIADPHTVDVLSANGAGTVIVDDRLLPAAQSVRYTPSAAVTLPTSTGQVRVLAADHRL ADAVAGYDGQQLLEQALARFRAELAMITAEPANERAAVLALPRDFTPPPGWLNAILRSLDSAYSRPVGIEEPSPDATRQR AGLTYNADAQSRELPVDYVKGVGQIRGEVAVLSAAFCPPTTLTGDLLQQCRLGKVDPMRNTLITALSAWWRTDRLGGFSL AQQADGQVGDYRSKIRVVASRIVNLTSSRGRVPVTLENGSDWNVTVVLKLSSTDRGRLVSATEVTRVLEPLQKDQFEIEV DAESAGTFPVDIRLETVDGQALGPDAAARVLVRSTVYGAIATAITIGAIGVLMLAVLIRLLRKLRARSRGGSAADAAAAA PPDGSGPPAGAGLLGPAGANGASGAGDPDHPGTGDGPFDPPGTAGPGWPERPVDDPAPAGLGHDPYFDGQPAPAAYREPT GSPYGPSTGGPGGRTAEPWSGRPATPAGSASQPRRRDGR >Mature_918_residues TGRNPFRRHRLAAAALLGTVALVWPGADVGLAAAPPDGARAPAATSITSTTLDSHNPQASSTVSTGLSTELSTGSASSVG ISPDSAAIIQPITRTNPSTSGTSGTQQTTPSTGGTTNGTTGLPIEVRLTSLVTPSAAAPQLRVTGTVDVGGTVLPTDLGV VLEVGGPLRSRGELAQLTSGGPPPQIRYSLLGSGPLTISPTATTPGQFAAQADVPAMFRSSAVSVRPVQIRIVGRVGERA RSTVASLTTFIVVSPPQAAARTAVVTVLPVSSKPRLRSDGLLTDDTLTDEIRDGGRLDALLDPLESTAPGTPPPQVALAV DPTLVQALQRMETPYQYATPGGRRNADPDPDAGAFLDRIKDFARRGGTVIALPYGDTDLPALVRADQLDALQYSVNTGQL VIAGLLGGKIPRSGTIAYPADGIADPHTVDVLSANGAGTVIVDDRLLPAAQSVRYTPSAAVTLPTSTGQVRVLAADHRLA DAVAGYDGQQLLEQALARFRAELAMITAEPANERAAVLALPRDFTPPPGWLNAILRSLDSAYSRPVGIEEPSPDATRQRA GLTYNADAQSRELPVDYVKGVGQIRGEVAVLSAAFCPPTTLTGDLLQQCRLGKVDPMRNTLITALSAWWRTDRLGGFSLA QQADGQVGDYRSKIRVVASRIVNLTSSRGRVPVTLENGSDWNVTVVLKLSSTDRGRLVSATEVTRVLEPLQKDQFEIEVD AESAGTFPVDIRLETVDGQALGPDAAARVLVRSTVYGAIATAITIGAIGVLMLAVLIRLLRKLRARSRGGSAADAAAAAP PDGSGPPAGAGLLGPAGANGASGAGDPDHPGTGDGPFDPPGTAGPGWPERPVDDPAPAGLGHDPYFDGQPAPAAYREPTG SPYGPSTGGPGGRTAEPWSGRPATPAGSASQPRRRDGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94549; Mature: 94418
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRNPFRRHRLAAAALLGTVALVWPGADVGLAAAPPDGARAPAATSITSTTLDSHNPQA CCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC SSTVSTGLSTELSTGSASSVGISPDSAAIIQPITRTNPSTSGTSGTQQTTPSTGGTTNGT CHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCC TGLPIEVRLTSLVTPSAAAPQLRVTGTVDVGGTVLPTDLGVVLEVGGPLRSRGELAQLTS CCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEECCCCCEEEECCCCCCCCCCHHHHCC GGPPPQIRYSLLGSGPLTISPTATTPGQFAAQADVPAMFRSSAVSVRPVQIRIVGRVGER CCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEEEHHHHH ARSTVASLTTFIVVSPPQAAARTAVVTVLPVSSKPRLRSDGLLTDDTLTDEIRDGGRLDA HHHHHHHEEEEEEECCCHHHHCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCHHH LLDPLESTAPGTPPPQVALAVDPTLVQALQRMETPYQYATPGGRRNADPDPDAGAFLDRI HHCCHHHCCCCCCCCCEEEEECHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHH KDFARRGGTVIALPYGDTDLPALVRADQLDALQYSVNTGQLVIAGLLGGKIPRSGTIAYP HHHHHCCCEEEEEECCCCCCHHHHHHCCHHHEEEECCCCCEEEEEHHCCCCCCCCEEECC ADGIADPHTVDVLSANGAGTVIVDDRLLPAAQSVRYTPSAAVTLPTSTGQVRVLAADHRL CCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHCEECCCCEEEECCCCCCEEEEECCCHH ADAVAGYDGQQLLEQALARFRAELAMITAEPANERAAVLALPRDFTPPPGWLNAILRSLD HHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH SAYSRPVGIEEPSPDATRQRAGLTYNADAQSRELPVDYVKGVGQIRGEVAVLSAAFCPPT HHHCCCCCCCCCCCCHHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCC TLTGDLLQQCRLGKVDPMRNTLITALSAWWRTDRLGGFSLAQQADGQVGDYRSKIRVVAS CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHH RIVNLTSSRGRVPVTLENGSDWNVTVVLKLSSTDRGRLVSATEVTRVLEPLQKDQFEIEV HHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCEEEEE DAESAGTFPVDIRLETVDGQALGPDAAARVLVRSTVYGAIATAITIGAIGVLMLAVLIRL ECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRKLRARSRGGSAADAAAAAPPDGSGPPAGAGLLGPAGANGASGAGDPDHPGTGDGPFDP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGTAGPGWPERPVDDPAPAGLGHDPYFDGQPAPAAYREPTGSPYGPSTGGPGGRTAEPWS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRPATPAGSASQPRRRDGR CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGRNPFRRHRLAAAALLGTVALVWPGADVGLAAAPPDGARAPAATSITSTTLDSHNPQA CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC SSTVSTGLSTELSTGSASSVGISPDSAAIIQPITRTNPSTSGTSGTQQTTPSTGGTTNGT CHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECHHCCCCCCCCCCCCCCCCCCCCCCCCCC TGLPIEVRLTSLVTPSAAAPQLRVTGTVDVGGTVLPTDLGVVLEVGGPLRSRGELAQLTS CCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEECCCCCEEEECCCCCCCCCCHHHHCC GGPPPQIRYSLLGSGPLTISPTATTPGQFAAQADVPAMFRSSAVSVRPVQIRIVGRVGER CCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEEEHHHHH ARSTVASLTTFIVVSPPQAAARTAVVTVLPVSSKPRLRSDGLLTDDTLTDEIRDGGRLDA HHHHHHHEEEEEEECCCHHHHCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCHHH LLDPLESTAPGTPPPQVALAVDPTLVQALQRMETPYQYATPGGRRNADPDPDAGAFLDRI HHCCHHHCCCCCCCCCEEEEECHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHH KDFARRGGTVIALPYGDTDLPALVRADQLDALQYSVNTGQLVIAGLLGGKIPRSGTIAYP HHHHHCCCEEEEEECCCCCCHHHHHHCCHHHEEEECCCCCEEEEEHHCCCCCCCCEEECC ADGIADPHTVDVLSANGAGTVIVDDRLLPAAQSVRYTPSAAVTLPTSTGQVRVLAADHRL CCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHCEECCCCEEEECCCCCCEEEEECCCHH ADAVAGYDGQQLLEQALARFRAELAMITAEPANERAAVLALPRDFTPPPGWLNAILRSLD HHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH SAYSRPVGIEEPSPDATRQRAGLTYNADAQSRELPVDYVKGVGQIRGEVAVLSAAFCPPT HHHCCCCCCCCCCCCHHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCC TLTGDLLQQCRLGKVDPMRNTLITALSAWWRTDRLGGFSLAQQADGQVGDYRSKIRVVAS CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHH RIVNLTSSRGRVPVTLENGSDWNVTVVLKLSSTDRGRLVSATEVTRVLEPLQKDQFEIEV HHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCEEEEE DAESAGTFPVDIRLETVDGQALGPDAAARVLVRSTVYGAIATAITIGAIGVLMLAVLIRL ECCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRKLRARSRGGSAADAAAAAPPDGSGPPAGAGLLGPAGANGASGAGDPDHPGTGDGPFDP HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGTAGPGWPERPVDDPAPAGLGHDPYFDGQPAPAAYREPTGSPYGPSTGGPGGRTAEPWS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GRPATPAGSASQPRRRDGR CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA