| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mviN [H]
Identifier: 158319041
GI number: 158319041
Start: 8956654
End: 8958627
Strand: Direct
Name: mviN [H]
Synonym: Franean1_7324
Alternate gene names: 158319041
Gene position: 8956654-8958627 (Clockwise)
Preceding gene: 158319040
Following gene: 158319042
Centisome position: 99.72
GC content: 73.1
Gene sequence:
>1974_bases GTGACGCCGCCACCGGCGTCCACCCGGCGCCCCGCGGCCGAGGGGGCCCGGCCAGCCGGACGCAGGCCGGCCGCGGGCAA GCAGGCCACAGGCAGACCCGCCACAGGCAAGCAGGCCGCGGGCAAGCAGGCCTCAGGCGCCGCGCGGGGCGCCGCCACGG CGAAGCGCGGTGGGCTCGGCCGCGCCAGCGGGACGATGGCGATCGGCACCATCGTCTCGCGGGCCTCGGGCTTCCTGCGC ACGGTCGCGATCGCCGCGGCGATCGGCACCGGGGCCGTCGGCCAGGCCTACAACGTCGCCAACACGACCCCGAACATCCT CTACGACCTGCTGCTCGGCGGGATCCTGACGAGCGTCATCGTGCCGGTGCTGGTGCAGGCGTCCAAGGAGGACCCGGACG GGGGCGACAGCTTCGCCTCGTCCCTGCTCACGCTGATGGTGCTCGGCCTGGGCGCGGCGGTGGTGGTGGGGATGTTCGCC GCGCCGCAGATCATCGGTCTCTACCTGAACGCCGGGCCGGCGCAACGCGCCCTCGGCGCGGACATGCTGCGCTGGTTCAT GCCGCAGATCCTCTTCTACGGCGTCGGCGCGACGCTCGGGGCGATCCTCAACACCCGCCAGTCCTTCGCCGCGCCCATGT TCGCGCCGGTGCTGAACAACCTGGTGGTGATCGCCACCTGCGTGGTGTTCATCTTCCTGCCCGGGCCGCGGCCGCCGACC CTGGACGGCATCACCGACGCCCAGACGGTCGTGCTCGCGGGCGGCACGACGCTCGGCGTGGTCGTGATGACCATCGCGCT GCTGCCCTCGGTGCGTGCCGTGGGATTCCGGTACCGGCCCCGGCTCGACCTGCGGCACCCCGGGCTGCGCTCGGCGTCCC GGCTGGCCGGCTGGACGCTGCTCTACGTCATGGTCAGTCAGCTCGGCTTCATGATGATCTCCAGGCTCTCGACGTCGACC ACCGCGTACTCGATCTACAGCTTTGCCTACCAGATCTTCCAGCTGCCGTACGCGATCATCGGCGTCTCGGTGATCACCGC CCTGCTCCCCCGGATGAGCAGCCACGCCGCCAGCGATCAGGCCGACCTGGTGCGCGAGGACCTCTCCACCGCGTCCCGGA TGACGGTCACCGCGATCATCCCCTCAGCGCTGTTCCTGCTGGCGCTGGGACGCCCGATCGCCGTGACAGTCTTCAACCAC GGCGCGGTCGACTACGACGATGCGATCGCGATCGGGGACACGCTGAGCGCCTTCGCGATCGCGCTCGTGCCGTTCTCGCT GTTCCAGGTGCAGCTGCGGGCCTTCTACGCCTACCGGGACAGCCGCACGCCCGCACTGGTCAACATCGGCGTGGTCGCCA CGAACGTGCTGGCCGCGTTCGTGCTGTCGGAGGTGGTCGCCGAGAAGCACCGGGCAGCCGCGCTGGCGCTGGCCTTCTCG CTGGCCTACCTGATCGGCCTGATGGCGACGACGGTCCTGCTGCGGCGCCGCCTGCGCGGCATCGACGGCAACCGCATCGC GCGGGTGACGACCCGGGTGAGCGTGACGGCCGGCGTGGGCGCGGTCCTCGCCAGCGTCATCGCGGACGGCCTGCGCGACC TGCTCGGCAAGGGCTGGCTCGGCTCCGGGATCGCGGTGGTGCTGGCGCTGGTCGTCGGTGGCCTGGTCTTCGTCGTGATC TCCGTGCGCACCGGGATGCACGAGATGACGGCCCTGATGCGCATCGTCGGTGGCCGCCTCGGCGTCGGCCGCCGGACGAA GCCCGCCGGTGCTGGTGCCAGCGCCAGCGCCGGCACAGGCACTGGCGCGGCCTCGGCGTCCTCAGCCCGGCCACCGCGAT CGGCCGGCCGGGGAGACAGCGGGCGGGGCCGGCCCCCGGGTGGGCGTGGCGATCGCGGCGGTCGCGGCGGGCCCTCCGGT CGGCCAGGCGGGCCACCAGGTCGCCGCGGCGGGTCCTCGGGCCGGCGCGGCTGA
Upstream 100 bases:
>100_bases GCCGCCGGTCGAGCCGCTCGACGGGCCACACGTGGAGCCACTGGTCGAACCACTCGACGAGGTGGCCGCCGACGATCGCA CCAGCCGGCTCGCGCCGCCC
Downstream 100 bases:
>100_bases CGGGCCGGGGCCACCTCCCGACACGGCCTCACCCATGCGGGCCGATGGTCTCGATTCCGTCGCCCGGATTACCTGCCGGG ATGGCACCAAGGTCCCACCG
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MTPPPASTRRPAAEGARPAGRRPAAGKQATGRPATGKQAAGKQASGAARGAATAKRGGLGRASGTMAIGTIVSRASGFLR TVAIAAAIGTGAVGQAYNVANTTPNILYDLLLGGILTSVIVPVLVQASKEDPDGGDSFASSLLTLMVLGLGAAVVVGMFA APQIIGLYLNAGPAQRALGADMLRWFMPQILFYGVGATLGAILNTRQSFAAPMFAPVLNNLVVIATCVVFIFLPGPRPPT LDGITDAQTVVLAGGTTLGVVVMTIALLPSVRAVGFRYRPRLDLRHPGLRSASRLAGWTLLYVMVSQLGFMMISRLSTST TAYSIYSFAYQIFQLPYAIIGVSVITALLPRMSSHAASDQADLVREDLSTASRMTVTAIIPSALFLLALGRPIAVTVFNH GAVDYDDAIAIGDTLSAFAIALVPFSLFQVQLRAFYAYRDSRTPALVNIGVVATNVLAAFVLSEVVAEKHRAAALALAFS LAYLIGLMATTVLLRRRLRGIDGNRIARVTTRVSVTAGVGAVLASVIADGLRDLLGKGWLGSGIAVVLALVVGGLVFVVI SVRTGMHEMTALMRIVGGRLGVGRRTKPAGAGASASAGTGTGAASASSARPPRSAGRGDSGRGRPPGGRGDRGGRGGPSG RPGGPPGRRGGSSGRRG
Sequences:
>Translated_657_residues MTPPPASTRRPAAEGARPAGRRPAAGKQATGRPATGKQAAGKQASGAARGAATAKRGGLGRASGTMAIGTIVSRASGFLR TVAIAAAIGTGAVGQAYNVANTTPNILYDLLLGGILTSVIVPVLVQASKEDPDGGDSFASSLLTLMVLGLGAAVVVGMFA APQIIGLYLNAGPAQRALGADMLRWFMPQILFYGVGATLGAILNTRQSFAAPMFAPVLNNLVVIATCVVFIFLPGPRPPT LDGITDAQTVVLAGGTTLGVVVMTIALLPSVRAVGFRYRPRLDLRHPGLRSASRLAGWTLLYVMVSQLGFMMISRLSTST TAYSIYSFAYQIFQLPYAIIGVSVITALLPRMSSHAASDQADLVREDLSTASRMTVTAIIPSALFLLALGRPIAVTVFNH GAVDYDDAIAIGDTLSAFAIALVPFSLFQVQLRAFYAYRDSRTPALVNIGVVATNVLAAFVLSEVVAEKHRAAALALAFS LAYLIGLMATTVLLRRRLRGIDGNRIARVTTRVSVTAGVGAVLASVIADGLRDLLGKGWLGSGIAVVLALVVGGLVFVVI SVRTGMHEMTALMRIVGGRLGVGRRTKPAGAGASASAGTGTGAASASSARPPRSAGRGDSGRGRPPGGRGDRGGRGGPSG RPGGPPGRRGGSSGRRG >Mature_656_residues TPPPASTRRPAAEGARPAGRRPAAGKQATGRPATGKQAAGKQASGAARGAATAKRGGLGRASGTMAIGTIVSRASGFLRT VAIAAAIGTGAVGQAYNVANTTPNILYDLLLGGILTSVIVPVLVQASKEDPDGGDSFASSLLTLMVLGLGAAVVVGMFAA PQIIGLYLNAGPAQRALGADMLRWFMPQILFYGVGATLGAILNTRQSFAAPMFAPVLNNLVVIATCVVFIFLPGPRPPTL DGITDAQTVVLAGGTTLGVVVMTIALLPSVRAVGFRYRPRLDLRHPGLRSASRLAGWTLLYVMVSQLGFMMISRLSTSTT AYSIYSFAYQIFQLPYAIIGVSVITALLPRMSSHAASDQADLVREDLSTASRMTVTAIIPSALFLLALGRPIAVTVFNHG AVDYDDAIAIGDTLSAFAIALVPFSLFQVQLRAFYAYRDSRTPALVNIGVVATNVLAAFVLSEVVAEKHRAAALALAFSL AYLIGLMATTVLLRRRLRGIDGNRIARVTTRVSVTAGVGAVLASVIADGLRDLLGKGWLGSGIAVVLALVVGGLVFVVIS VRTGMHEMTALMRIVGGRLGVGRRTKPAGAGASASAGTGTGAASASSARPPRSAGRGDSGRGRPPGGRGDRGGRGGPSGR PGGPPGRRGGSSGRRG
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=425, Percent_Identity=29.4117647058824, Blast_Score=132, Evalue=1e-31,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 67307; Mature: 67176
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPPASTRRPAAEGARPAGRRPAAGKQATGRPATGKQAAGKQASGAARGAATAKRGGLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHCCHHHHHCCCC RASGTMAIGTIVSRASGFLRTVAIAAAIGTGAVGQAYNVANTTPNILYDLLLGGILTSVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VPVLVQASKEDPDGGDSFASSLLTLMVLGLGAAVVVGMFAAPQIIGLYLNAGPAQRALGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH DMLRWFMPQILFYGVGATLGAILNTRQSFAAPMFAPVLNNLVVIATCVVFIFLPGPRPPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LDGITDAQTVVLAGGTTLGVVVMTIALLPSVRAVGFRYRPRLDLRHPGLRSASRLAGWTL CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH LYVMVSQLGFMMISRLSTSTTAYSIYSFAYQIFQLPYAIIGVSVITALLPRMSSHAASDQ HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ADLVREDLSTASRMTVTAIIPSALFLLALGRPIAVTVFNHGAVDYDDAIAIGDTLSAFAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHH ALVPFSLFQVQLRAFYAYRDSRTPALVNIGVVATNVLAAFVLSEVVAEKHRAAALALAFS HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYLIGLMATTVLLRRRLRGIDGNRIARVTTRVSVTAGVGAVLASVIADGLRDLLGKGWL HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC GSGIAVVLALVVGGLVFVVISVRTGMHEMTALMRIVGGRLGVGRRTKPAGAGASASAGTG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC TGAASASSARPPRSAGRGDSGRGRPPGGRGDRGGRGGPSGRPGGPPGRRGGSSGRRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TPPPASTRRPAAEGARPAGRRPAAGKQATGRPATGKQAAGKQASGAARGAATAKRGGLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHCCHHHHHCCCC RASGTMAIGTIVSRASGFLRTVAIAAAIGTGAVGQAYNVANTTPNILYDLLLGGILTSVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VPVLVQASKEDPDGGDSFASSLLTLMVLGLGAAVVVGMFAAPQIIGLYLNAGPAQRALGA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH DMLRWFMPQILFYGVGATLGAILNTRQSFAAPMFAPVLNNLVVIATCVVFIFLPGPRPPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LDGITDAQTVVLAGGTTLGVVVMTIALLPSVRAVGFRYRPRLDLRHPGLRSASRLAGWTL CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH LYVMVSQLGFMMISRLSTSTTAYSIYSFAYQIFQLPYAIIGVSVITALLPRMSSHAASDQ HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ADLVREDLSTASRMTVTAIIPSALFLLALGRPIAVTVFNHGAVDYDDAIAIGDTLSAFAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHH ALVPFSLFQVQLRAFYAYRDSRTPALVNIGVVATNVLAAFVLSEVVAEKHRAAALALAFS HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYLIGLMATTVLLRRRLRGIDGNRIARVTTRVSVTAGVGAVLASVIADGLRDLLGKGWL HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC GSGIAVVLALVVGGLVFVVISVRTGMHEMTALMRIVGGRLGVGRRTKPAGAGASASAGTG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC TGAASASSARPPRSAGRGDSGRGRPPGGRGDRGGRGGPSGRPGGPPGRRGGSSGRRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]