| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is muT4 [H]
Identifier: 158319039
GI number: 158319039
Start: 8952153
End: 8952578
Strand: Direct
Name: muT4 [H]
Synonym: Franean1_7322
Alternate gene names: 158319039
Gene position: 8952153-8952578 (Clockwise)
Preceding gene: 158319037
Following gene: 158319040
Centisome position: 99.67
GC content: 71.83
Gene sequence:
>426_bases GTGGAGGAGACCTCGGCCGGGGGCCTCGTGCTCGACACCGCGTCCGCCGCCGCGAACGCGGCGCTGATCGCCCGCAGGGA CAAGCGTGGCCGGCTGTTGTGGTCGCTGCCGAAGGGTCATGTCGAGTGCGATGAGACCACGGAGGAGGCCGCCGTCCGAG AGGTCGCCGAGGAGACCGGTGTGACCGGAGCGGTTCTGGGCCCGCTGGGCACGATCGACTTCTGGTTCGTCGCCGGCGAG GCTCGCGTGCACAAGACCGTCCACCACTTCCTCCTGCTCCGGACGTCGGGCGACCTCTCCGACGACGACGTCGAGGTCGC GGAGGTCGCGTGGGTCCCGCTGCCCGAGGTGGCGCGACGGCTCGCGTACGCCGACGAACGACGGCTGCTCGACGGGGTGC CGACGATCCTCGCCGACGCCTCGTGA
Upstream 100 bases:
>100_bases GAACGAGCGGGACACACAACGGGGCTGTTTCGGCTGGTGCTCGTACGATCAGTCCATGCCCTCCCCGCCCAGGACGCCCG GCCGCAGGCCGTTGCGCAGG
Downstream 100 bases:
>100_bases CCGGCCGTAACCCGTTCCGCCGGCACCGGCTGGCGGCCGCGGCGCTGCTCGGGACCGTCGCGTTGGTCTGGCCCGGGGCC GATGTGGGCCTGGCGGCGGC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MEETSAGGLVLDTASAAANAALIARRDKRGRLLWSLPKGHVECDETTEEAAVREVAEETGVTGAVLGPLGTIDFWFVAGE ARVHKTVHHFLLLRTSGDLSDDDVEVAEVAWVPLPEVARRLAYADERRLLDGVPTILADAS
Sequences:
>Translated_141_residues MEETSAGGLVLDTASAAANAALIARRDKRGRLLWSLPKGHVECDETTEEAAVREVAEETGVTGAVLGPLGTIDFWFVAGE ARVHKTVHHFLLLRTSGDLSDDDVEVAEVAWVPLPEVARRLAYADERRLLDGVPTILADAS >Mature_141_residues MEETSAGGLVLDTASAAANAALIARRDKRGRLLWSLPKGHVECDETTEEAAVREVAEETGVTGAVLGPLGTIDFWFVAGE ARVHKTVHHFLLLRTSGDLSDDDVEVAEVAWVPLPEVARRLAYADERRLLDGVPTILADAS
Specific function: May be involved in the GO system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8- oxoguanine, 8-oxo-dGTP) from DNA and the nucleotide pool. In vitro has dATPase rather than 8-oxo-dGTPase activity [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: 3.6.-.- [C]
Molecular weight: Translated: 15144; Mature: 15144
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEETSAGGLVLDTASAAANAALIARRDKRGRLLWSLPKGHVECDETTEEAAVREVAEETG CCCCCCCCEEEECCHHHHCCCEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHC VTGAVLGPLGTIDFWFVAGEARVHKTVHHFLLLRTSGDLSDDDVEVAEVAWVPLPEVARR CCEEEECCCCCEEEEEEECCHHHHHHHHHHEEEECCCCCCCCCCEEEHEECCCCHHHHHH LAYADERRLLDGVPTILADAS HHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure MEETSAGGLVLDTASAAANAALIARRDKRGRLLWSLPKGHVECDETTEEAAVREVAEETG CCCCCCCCEEEECCHHHHCCCEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHC VTGAVLGPLGTIDFWFVAGEARVHKTVHHFLLLRTSGDLSDDDVEVAEVAWVPLPEVARR CCEEEECCCCCEEEEEEECCHHHHHHHHHHEEEECCCCCCCCCCEEEHEECCCCHHHHHH LAYADERRLLDGVPTILADAS HHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]