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The map label for this gene is nreC [H]

Identifier: 158318963

GI number: 158318963

Start: 8848662

End: 8849309

Strand: Direct

Name: nreC [H]

Synonym: Franean1_7246

Alternate gene names: 158318963

Gene position: 8848662-8849309 (Clockwise)

Preceding gene: 158318962

Following gene: 158318964

Centisome position: 98.52

GC content: 72.69

Gene sequence:

>648_bases
GTGCGGGTCGTGATCGCGGAGGACTCCGTGCTGCTGCGCGAGGGAATCCGCCGCCTGCTGACCGACGCCGGCTGCGAGGT
GGTCGCGACGGTCGGGGACGGCCCCGGCCTGGTCACCGCGATCGTCGAGCACCGGCCCGACGTCTCGGTGGTGGACGTGC
GCATGCCGCCGTCGCACCGCGACGAGGGGCTGCGCGCCGCGATCTCCGCGCGGGACAAGGTGCCCGGTACGCCGGTGCTC
GTCCTGAGCCAGTACGTGGAGAAGCAGTACGCCAGCGAGCTGCTCGCGGACGGCGCGGGTGCCGTCGGCTACCTCCTCAA
GGACAGGGTCGCGGACGTCCGTGAGTTCGTCGAGGCGGTGCGGCGCGTCGCCGCCGGCGGGACGGTGATGGATCCCGAGG
TGGTCGCGCAGCTGCTGGTGCGCAGCCGCCGCAACGATCCGATGGCCACGCTCACCCCGCGCGAGCGCGAGGTGCTGGGA
CTGATGGCCGAAGGCCGGTCGAACACGGCCATCGCCGCTGCGCTCGTGGTGAGCGCCGGCGCGGTGGAGAAGCACATCTC
GAACGTCTTCGCCAAGCTGGGGCTGGAGTCCTCCGGGACGGACCACCGCCGGGTCCTCGCCGTCCTCACCTACCTCCGGG
AGTCCTGA

Upstream 100 bases:

>100_bases
GGCATACCGACTGCGGGGTCTACGTCACCATGCTGACCGAGGCGATCCTGCGCCCGGGCGACCCGCTCACGCCGCCGGAC
GGACGCGAGGAGGATGTGCT

Downstream 100 bases:

>100_bases
CCTCCGGGAGTACCCACCTCCGGAATCCTGACCGGACCTGCTGCGGGAATCCTGCCGAGGCCCATCTCGGGAAATGCTGA
CCGGCGTCCATTTCGGACGT

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Nitrogen regulation protein C [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MRVVIAEDSVLLREGIRRLLTDAGCEVVATVGDGPGLVTAIVEHRPDVSVVDVRMPPSHRDEGLRAAISARDKVPGTPVL
VLSQYVEKQYASELLADGAGAVGYLLKDRVADVREFVEAVRRVAAGGTVMDPEVVAQLLVRSRRNDPMATLTPREREVLG
LMAEGRSNTAIAAALVVSAGAVEKHISNVFAKLGLESSGTDHRRVLAVLTYLRES

Sequences:

>Translated_215_residues
MRVVIAEDSVLLREGIRRLLTDAGCEVVATVGDGPGLVTAIVEHRPDVSVVDVRMPPSHRDEGLRAAISARDKVPGTPVL
VLSQYVEKQYASELLADGAGAVGYLLKDRVADVREFVEAVRRVAAGGTVMDPEVVAQLLVRSRRNDPMATLTPREREVLG
LMAEGRSNTAIAAALVVSAGAVEKHISNVFAKLGLESSGTDHRRVLAVLTYLRES
>Mature_215_residues
MRVVIAEDSVLLREGIRRLLTDAGCEVVATVGDGPGLVTAIVEHRPDVSVVDVRMPPSHRDEGLRAAISARDKVPGTPVL
VLSQYVEKQYASELLADGAGAVGYLLKDRVADVREFVEAVRRVAAGGTVMDPEVVAQLLVRSRRNDPMATLTPREREVLG
LMAEGRSNTAIAAALVVSAGAVEKHISNVFAKLGLESSGTDHRRVLAVLTYLRES

Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. Phosphorylated nreC binds to a GC-rich palindromic sequence at the promoters of the nitrate (narGHJI) and nit

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=219, Percent_Identity=35.6164383561644, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1790102, Length=206, Percent_Identity=29.6116504854369, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1788222, Length=200, Percent_Identity=26.5, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23027; Mature: 23027

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVIAEDSVLLREGIRRLLTDAGCEVVATVGDGPGLVTAIVEHRPDVSVVDVRMPPSHR
CEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCC
DEGLRAAISARDKVPGTPVLVLSQYVEKQYASELLADGAGAVGYLLKDRVADVREFVEAV
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RRVAAGGTVMDPEVVAQLLVRSRRNDPMATLTPREREVLGLMAEGRSNTAIAAALVVSAG
HHHHCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHH
AVEKHISNVFAKLGLESSGTDHRRVLAVLTYLRES
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVVIAEDSVLLREGIRRLLTDAGCEVVATVGDGPGLVTAIVEHRPDVSVVDVRMPPSHR
CEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCC
DEGLRAAISARDKVPGTPVLVLSQYVEKQYASELLADGAGAVGYLLKDRVADVREFVEAV
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
RRVAAGGTVMDPEVVAQLLVRSRRNDPMATLTPREREVLGLMAEGRSNTAIAAALVVSAG
HHHHCCCCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHH
AVEKHISNVFAKLGLESSGTDHRRVLAVLTYLRES
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12426351 [H]