| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is ycbX [C]
Identifier: 158318962
GI number: 158318962
Start: 8847736
End: 8848674
Strand: Direct
Name: ycbX [C]
Synonym: Franean1_7245
Alternate gene names: 158318962
Gene position: 8847736-8848674 (Clockwise)
Preceding gene: 158318957
Following gene: 158318963
Centisome position: 98.5
GC content: 72.84
Gene sequence:
>939_bases ATGGACGCCAGCAGCGAGGCGGGCACGACCGCGAGCCCCGCCGTGGGCCGCGTCGTCCGGCTCTTCCGGTACCCGTTGAA GGGGATGACACCCGAGGCGCTCCCGGAGGTGCCGCTCCATCCGGGCGACAGCGTCCCCGGTGACCGCATGTTCGCGCTCG CCCGCCCGGACACGATGTTCGACGAGGAAGACCCCGAGGTCCTGCCCAAGACCCGTTTCGTCATGCTCCAGAAGGACGAG GCGCTCGCGCGGATCCGCAGCTCGTTCGACCCGGCGTCCGGGATGCTGACCTTCGGCCTGCGCGAGCAGGCGGCACACAC CGGTGACGTGCCTGGTGACGGGCCCGTCACCGGGCCCGGTGGCGGCCCCGCCGCCAGGCCCGGTGACGGGCTCGTCGACG TGCGCCGGGTCGACCTGAACACCCCGGCCGGGCGCACCGAGTTGGAGGACTACGTCCTCGCGGTGCTCGGGCCCCGGCTC GGCGGCCGGCCGCGGCTCGTCGCTGCCCGCGGGCGGCACCGCTTCACCGACACGGGTGCTGGCGGGGACACGTTCATGCA CGCCGTCTCGGTGATCAATCTCGCCTCCGTCCGGGATCTCGCGGAGCGGGTCGGTGAGCCCGTCGACCCGCTGCGGTTCC GGGCGAACGTCTACATCGACGGGATCGCACCGTGGGCGGAGCTCGGCTGGGCCGGCCTGGAGCTCGGCCTCGGCGCCGCC CGCGCGCGCGTGCTCGCACGGACGCCACGCTGCGCGGCGACGACCGTCAATCCCGAGACGGGGATCCGTGACATCCGGAT ACTCAAGGAACTCTCCAGCAACTACGGGCATACCGACTGCGGGGTCTACGTCACCATGCTGACCGAGGCGATCCTGCGCC CGGGCGACCCGCTCACGCCGCCGGACGGACGCGAGGAGGATGTGCTGTGCGGGTCGTGA
Upstream 100 bases:
>100_bases GGAACATGGCGAGACGGTTTCACCCGGCTCCGACAGTTTCGGCCCACTGACAGTTTCGGCCTACACCGGCGGTTTCGGGG ATGGAAGGTTGAGCACGGGC
Downstream 100 bases:
>100_bases TCGCGGAGGACTCCGTGCTGCTGCGCGAGGGAATCCGCCGCCTGCTGACCGACGCCGGCTGCGAGGTGGTCGCGACGGTC GGGGACGGCCCCGGCCTGGT
Product: MOSC domain-containing protein
Products: NA
Alternate protein names: MOSC Domain Containing Protein; Mosc Domain Protein; Mosc Domain Containing Protein; Transcriptional Regulator; Mosc Domain; Xylene Monooxygenase Electron Transfer Component; MOSC Domain Protein
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MDASSEAGTTASPAVGRVVRLFRYPLKGMTPEALPEVPLHPGDSVPGDRMFALARPDTMFDEEDPEVLPKTRFVMLQKDE ALARIRSSFDPASGMLTFGLREQAAHTGDVPGDGPVTGPGGGPAARPGDGLVDVRRVDLNTPAGRTELEDYVLAVLGPRL GGRPRLVAARGRHRFTDTGAGGDTFMHAVSVINLASVRDLAERVGEPVDPLRFRANVYIDGIAPWAELGWAGLELGLGAA RARVLARTPRCAATTVNPETGIRDIRILKELSSNYGHTDCGVYVTMLTEAILRPGDPLTPPDGREEDVLCGS
Sequences:
>Translated_312_residues MDASSEAGTTASPAVGRVVRLFRYPLKGMTPEALPEVPLHPGDSVPGDRMFALARPDTMFDEEDPEVLPKTRFVMLQKDE ALARIRSSFDPASGMLTFGLREQAAHTGDVPGDGPVTGPGGGPAARPGDGLVDVRRVDLNTPAGRTELEDYVLAVLGPRL GGRPRLVAARGRHRFTDTGAGGDTFMHAVSVINLASVRDLAERVGEPVDPLRFRANVYIDGIAPWAELGWAGLELGLGAA RARVLARTPRCAATTVNPETGIRDIRILKELSSNYGHTDCGVYVTMLTEAILRPGDPLTPPDGREEDVLCGS >Mature_312_residues MDASSEAGTTASPAVGRVVRLFRYPLKGMTPEALPEVPLHPGDSVPGDRMFALARPDTMFDEEDPEVLPKTRFVMLQKDE ALARIRSSFDPASGMLTFGLREQAAHTGDVPGDGPVTGPGGGPAARPGDGLVDVRRVDLNTPAGRTELEDYVLAVLGPRL GGRPRLVAARGRHRFTDTGAGGDTFMHAVSVINLASVRDLAERVGEPVDPLRFRANVYIDGIAPWAELGWAGLELGLGAA RARVLARTPRCAATTVNPETGIRDIRILKELSSNYGHTDCGVYVTMLTEAILRPGDPLTPPDGREEDVLCGS
Specific function: Unknown
COG id: COG3217
COG function: function code R; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33250; Mature: 33250
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDASSEAGTTASPAVGRVVRLFRYPLKGMTPEALPEVPLHPGDSVPGDRMFALARPDTMF CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCC DEEDPEVLPKTRFVMLQKDEALARIRSSFDPASGMLTFGLREQAAHTGDVPGDGPVTGPG CCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCEEEECHHHHHHCCCCCCCCCCCCCCC GGPAARPGDGLVDVRRVDLNTPAGRTELEDYVLAVLGPRLGGRPRLVAARGRHRFTDTGA CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCC GGDTFMHAVSVINLASVRDLAERVGEPVDPLRFRANVYIDGIAPWAELGWAGLELGLGAA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHCCHHHHHCCHHH RARVLARTPRCAATTVNPETGIRDIRILKELSSNYGHTDCGVYVTMLTEAILRPGDPLTP HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC PDGREEDVLCGS CCCCCCCCCCCC >Mature Secondary Structure MDASSEAGTTASPAVGRVVRLFRYPLKGMTPEALPEVPLHPGDSVPGDRMFALARPDTMF CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCC DEEDPEVLPKTRFVMLQKDEALARIRSSFDPASGMLTFGLREQAAHTGDVPGDGPVTGPG CCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCEEEECHHHHHHCCCCCCCCCCCCCCC GGPAARPGDGLVDVRRVDLNTPAGRTELEDYVLAVLGPRLGGRPRLVAARGRHRFTDTGA CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCC GGDTFMHAVSVINLASVRDLAERVGEPVDPLRFRANVYIDGIAPWAELGWAGLELGLGAA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHCCHHHHHCCHHH RARVLARTPRCAATTVNPETGIRDIRILKELSSNYGHTDCGVYVTMLTEAILRPGDPLTP HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC PDGREEDVLCGS CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA