Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is cenA [H]

Identifier: 158318914

GI number: 158318914

Start: 8789630

End: 8790811

Strand: Direct

Name: cenA [H]

Synonym: Franean1_7197

Alternate gene names: 158318914

Gene position: 8789630-8790811 (Clockwise)

Preceding gene: 158318913

Following gene: 158318915

Centisome position: 97.86

GC content: 74.03

Gene sequence:

>1182_bases
GTGACCGTCCGGGCGGAAGACGGCAACGGGCCGAAGCCGCGGTTGCGCGAGCCTCAGGTCCGGCCAGGTCGGCCAGGTCG
CACCCGCCTCCGGCGCCGGGCCTGTGCCGCCGGGGCGACGGTGGTCGCGGTGCTCGCCCTCGCCGCCTGCGGCGGGGGCT
CGAGCCCCACCCCGGTGACACCCAGCGTGACCGCGGCCGCACCGAACGTTCCCACCGGTCCGCTGACAGCGGTCGGACCG
CAATGCCCGGCCGGCGACCCGGCCGGCGCCCAGCGGCCGACCGAGACCGTCGTGCCCGCCGATCCCGCTCCCGCCGCGCC
CTTCCTCGTCGACCACGGCAGCCAGGCGGCCGAGGAGGCGCAGCGCAACCCCGCGCGCGCCCAGATCCTCGCGCCACTGG
TCAACACCCCCACCGCCTATCCGGTCGGTGACTGGCTGAGAGATGTGCCCGGCGAGGTCCACAAGCGCGCCTCCGCGAGC
CGCGACACCGGCACGACCGCGACATTCATGATCTATGCGATTCCGCACCGTGACGCGGAGGCCGTCTACTCCGCCGGTGG
CCTGCCCAACGCCGACGCCTACCGGACGTTCACCCGCCAGGTCGCCGGCGCGATCGGCGACGCCCGCGCAGTGATCATCC
TTGAGCCGGACTCGCTCGGTCAGATGGACAGCCTGCCCGCCGACCAGCAGGCCGAGCGCTACGCGCTGCTCAACGACGCG
GTCGGCGTGTACGGCGCGCTGCCCAACACCAGCGTCTACCTGGACGGCGCGAACTGCGGCTGGATGCCGGCGGGAGCGGC
GCCGGTGATCGCCGAACGGCTCCTGCGGGCCGGGGTGAAGGGCGCCCGCGGCTTCGCGGTCAACGTGTCCAACTACTACC
GGACCGAGGACGAGACCGCCCGAGGCGAGATCATCTCGGCCCTGACCGGCGGCACCCACTTCGTGGTCGACACCTCGCGC
AACGGCCGGGGCCCCGCCGAGGGCATCCAGAACCAGTGGTGCAACCCGCCGGACCGTGGCCTGGGCGTCGCCCCGACGAT
CGAGACGGGCTCACCGCACGCCGACGCGTTCCTCTGGATCAAGACCCCTGGTGCCAGCGACGGCGAGTGCGGACGCGGCA
ACCCCGCGGCCGGCGCCTGGTGGCAACAGCAGGCGGAGGAGCTGGTCCGCAATGCGGCCTGA

Upstream 100 bases:

>100_bases
GGCCAGCCGGACGGTCAGTACTAGCCTGGGACAGGTTGAATCGACGCAACGCAGGCGTCTGGCCCGGCCGGCTGGATCAC
GGGAGCAAGGGGGATGCCGG

Downstream 100 bases:

>100_bases
GCGACCTGAGCGGCCTGAGCCTCGACGGGGCCGCCAGGATCTGCGGGGCCGACAGCGCGGGCGGCGTGGGCCGACGTCCA
CCGGCCTGGCGTGCGCCGCG

Product: cellulase

Products: NA

Alternate protein names: Cellulase A; Endo-1,4-beta-glucanase A [H]

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MTVRAEDGNGPKPRLREPQVRPGRPGRTRLRRRACAAGATVVAVLALAACGGGSSPTPVTPSVTAAAPNVPTGPLTAVGP
QCPAGDPAGAQRPTETVVPADPAPAAPFLVDHGSQAAEEAQRNPARAQILAPLVNTPTAYPVGDWLRDVPGEVHKRASAS
RDTGTTATFMIYAIPHRDAEAVYSAGGLPNADAYRTFTRQVAGAIGDARAVIILEPDSLGQMDSLPADQQAERYALLNDA
VGVYGALPNTSVYLDGANCGWMPAGAAPVIAERLLRAGVKGARGFAVNVSNYYRTEDETARGEIISALTGGTHFVVDTSR
NGRGPAEGIQNQWCNPPDRGLGVAPTIETGSPHADAFLWIKTPGASDGECGRGNPAAGAWWQQQAEELVRNAA

Sequences:

>Translated_393_residues
MTVRAEDGNGPKPRLREPQVRPGRPGRTRLRRRACAAGATVVAVLALAACGGGSSPTPVTPSVTAAAPNVPTGPLTAVGP
QCPAGDPAGAQRPTETVVPADPAPAAPFLVDHGSQAAEEAQRNPARAQILAPLVNTPTAYPVGDWLRDVPGEVHKRASAS
RDTGTTATFMIYAIPHRDAEAVYSAGGLPNADAYRTFTRQVAGAIGDARAVIILEPDSLGQMDSLPADQQAERYALLNDA
VGVYGALPNTSVYLDGANCGWMPAGAAPVIAERLLRAGVKGARGFAVNVSNYYRTEDETARGEIISALTGGTHFVVDTSR
NGRGPAEGIQNQWCNPPDRGLGVAPTIETGSPHADAFLWIKTPGASDGECGRGNPAAGAWWQQQAEELVRNAA
>Mature_392_residues
TVRAEDGNGPKPRLREPQVRPGRPGRTRLRRRACAAGATVVAVLALAACGGGSSPTPVTPSVTAAAPNVPTGPLTAVGPQ
CPAGDPAGAQRPTETVVPADPAPAAPFLVDHGSQAAEEAQRNPARAQILAPLVNTPTAYPVGDWLRDVPGEVHKRASASR
DTGTTATFMIYAIPHRDAEAVYSAGGLPNADAYRTFTRQVAGAIGDARAVIILEPDSLGQMDSLPADQQAERYALLNDAV
GVYGALPNTSVYLDGANCGWMPAGAAPVIAERLLRAGVKGARGFAVNVSNYYRTEDETARGEIISALTGGTHFVVDTSRN
GRGPAEGIQNQWCNPPDRGLGVAPTIETGSPHADAFLWIKTPGASDGECGRGNPAAGAWWQQQAEELVRNAA

Specific function: The biological conversion of cellulose to glucose generally requires three types of hydrolytic enzymes:(1) Endoglucanases which cut internal beta-1,4-glucosidic bonds; (2) Exocellobiohydrolases that cut the dissaccharide cellobiose from the non-reducing e

COG id: COG5297

COG function: function code G; Cellobiohydrolase A (1,4-beta-cellobiosidase A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CBM2 (carbohydrate binding type-2) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016288
- InterPro:   IPR008965
- InterPro:   IPR012291
- InterPro:   IPR018366
- InterPro:   IPR001919
- InterPro:   IPR001524
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00553 CBM_2; PF01341 Glyco_hydro_6 [H]

EC number: =3.2.1.4 [H]

Molecular weight: Translated: 40736; Mature: 40605

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00656 GLYCOSYL_HYDROL_F6_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRAEDGNGPKPRLREPQVRPGRPGRTRLRRRACAAGATVVAVLALAACGGGSSPTPVT
CEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PSVTAAAPNVPTGPLTAVGPQCPAGDPAGAQRPTETVVPADPAPAAPFLVDHGSQAAEEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
QRNPARAQILAPLVNTPTAYPVGDWLRDVPGEVHKRASASRDTGTTATFMIYAIPHRDAE
HCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEEECCCCHH
AVYSAGGLPNADAYRTFTRQVAGAIGDARAVIILEPDSLGQMDSLPADQQAERYALLNDA
HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
VGVYGALPNTSVYLDGANCGWMPAGAAPVIAERLLRAGVKGARGFAVNVSNYYRTEDETA
HHHEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECHHHCCCCCCHH
RGEIISALTGGTHFVVDTSRNGRGPAEGIQNQWCNPPDRGLGVAPTIETGSPHADAFLWI
HHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEE
KTPGASDGECGRGNPAAGAWWQQQAEELVRNAA
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVRAEDGNGPKPRLREPQVRPGRPGRTRLRRRACAAGATVVAVLALAACGGGSSPTPVT
EEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PSVTAAAPNVPTGPLTAVGPQCPAGDPAGAQRPTETVVPADPAPAAPFLVDHGSQAAEEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
QRNPARAQILAPLVNTPTAYPVGDWLRDVPGEVHKRASASRDTGTTATFMIYAIPHRDAE
HCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEEECCCCHH
AVYSAGGLPNADAYRTFTRQVAGAIGDARAVIILEPDSLGQMDSLPADQQAERYALLNDA
HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
VGVYGALPNTSVYLDGANCGWMPAGAAPVIAERLLRAGVKGARGFAVNVSNYYRTEDETA
HHHEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECHHHCCCCCCHH
RGEIISALTGGTHFVVDTSRNGRGPAEGIQNQWCNPPDRGLGVAPTIETGSPHADAFLWI
HHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEE
KTPGASDGECGRGNPAAGAWWQQQAEELVRNAA
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3023193; 2681184; 1761039 [H]