Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318913

Identifier: 158318913

GI number: 158318913

Start: 8787956

End: 8789509

Strand: Direct

Name: 158318913

Synonym: Franean1_7196

Alternate gene names: NA

Gene position: 8787956-8789509 (Clockwise)

Preceding gene: 158318912

Following gene: 158318914

Centisome position: 97.84

GC content: 66.92

Gene sequence:

>1554_bases
GTGGTCCAGGTCTGCTGCCTAGCCATTGTCATCGTGGCCGGGAACGGCCCGTTCCTCAGCGCCTGGGCGACCGACAAGTA
CGACACCTGGCGCTCGCACCAGCCGGACTACATGCGTCAGTACGGCCGCTGGGACATCGTCGCCGACCCCGGTTCGCGCT
CCATCCACGCGGCGCTGCTGCGGACCGGGAAGATTCTGCTGCTGGCCGGTTCGGGAAACAACCAGGCCAACTTCGACGCC
AAGCGCTTCGAGACCCTGCTGTGGGACCCGACCGCCAACACCTTCGAGCAGGTCTACACGCCGTGGGACGTCTTCTGCGC
CGGCCAGGCGTTTCTTCCGAGCGGTGAGCTGCTCATCGCCGGCGGCACGAAGAAGTACGAGGTCCTCGCCCAGGACTCGC
CGGACGGCAAGAAGCAGGAGTACCAGGGGCTGAAGGACAGCTACACGTTCAATCCGCAGACGGAGCGGTACGAGAAGACC
GGCGACCTGAACTTCGCCAGGTGGTACCCGACCCTGGTCACGCTGGCCAGCGGCCAGGTGGTCGCGGTCTCCGGCCTGAA
CGAGAAGGGCGACATCGACCCAGGCAACACGGAGTGGTTCGACCAGGCGAACCGGACGTGGAACCACAACGAGGGGCTGG
TCAAGGAGTTCCCGACCTACCCGTCGCTGCTGCTCGCCGGGGACGGCCGGCTGTTCTTCTCCGGCGCGAACGCCGGTTAC
GGGCCGGCCTCGCTGGAAGCCCGCCAGCCCGGATTCTGGAGCCTCGCCGACGGTACGTTCCAGGCGGTTCCGGGCCTGCC
TCAGCCGGAGATCAACGAGACCGCCGGAACGGTGATGCTGCCGCCGGCCCAGGAACAGCGGGTGATGTTCGTCGCCGGCG
GCGGCGTCGGCGACACCCAGGTGGCCACCGCCCGCACCGCGATCGTCGACCTGGACGACCCGAATCCCCATTACGTCCCG
GGGCCGAACACCACTGTCGCGAAGCGGTACCCCGGCGTCGTCGTCCTGCCGGACGACACCGTGCTCGTCTCCGGCGGCTC
CACCGCCTACCGCCAGAAGGACACCCAGACGGCGGAGATCTACCACCCGGACACGAACACCTTCACCACAGCCGCCGACC
CGCTCGTCGGCCGGGACTACCACTCGAGCTATCTACTGATGCCCGACGGCCGGGTGGCGGTTTTCGGTTCCAATCCGCTG
AGCGACGACAACTTCTTCGAGACCCGGATCGAGATCTACAGTCCGCCCTACATGTACCAGGGTGAGCGGCCGGTCATTAA
GACCGCGCCGACCTCGGTCACCCGTGGCACCACAATCGATCTGGGCGTCTCCCAGGAGGTTTCCAAGGTCCGCCTGATCC
GTCCGGGCGCCTACACGCACGTGACCGACACCGAGCAGCGCTCGGTGGCCCTCCCCCTGGTCAGCCAGGCGAACGGCAAG
GTAACGGTGAGTGTTCCCGACAACGCCAACCTGCTGCCGCCGGACTGGTACATGCTCTTCGTCGACAACGGCGAGAACAT
TCCGTCCGTCGCCACCTGGGTGCAGGTCCAGTGA

Upstream 100 bases:

>100_bases
GCGGGTGTCACTCGACGGCCTGTTGGAAGAGATCGGCTGATGGCCATGACGAGAATCTGATGGGACGATGAAAATAATCA
GCGGGCCGCGTCGGTGGCGA

Downstream 100 bases:

>100_bases
GCGCCCACCCCCACCATTCGGGCCAGCCGGACGGTCAGTACTAGCCTGGGACAGGTTGAATCGACGCAACGCAGGCGTCT
GGCCCGGCCGGCTGGATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: Galactose Oxidase; Kelch Domain Protein; Kelch Domain-Containing Protein; NHL Repeat Containing Protein; Arabinogalactan Endo-1 4-Beta-Galactosidase; Kelch Repeat-Containing Protein; Kelch Domain Containing Protein; Exported Oxidase; Lectin Repeat-Containing Protein

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MVQVCCLAIVIVAGNGPFLSAWATDKYDTWRSHQPDYMRQYGRWDIVADPGSRSIHAALLRTGKILLLAGSGNNQANFDA
KRFETLLWDPTANTFEQVYTPWDVFCAGQAFLPSGELLIAGGTKKYEVLAQDSPDGKKQEYQGLKDSYTFNPQTERYEKT
GDLNFARWYPTLVTLASGQVVAVSGLNEKGDIDPGNTEWFDQANRTWNHNEGLVKEFPTYPSLLLAGDGRLFFSGANAGY
GPASLEARQPGFWSLADGTFQAVPGLPQPEINETAGTVMLPPAQEQRVMFVAGGGVGDTQVATARTAIVDLDDPNPHYVP
GPNTTVAKRYPGVVVLPDDTVLVSGGSTAYRQKDTQTAEIYHPDTNTFTTAADPLVGRDYHSSYLLMPDGRVAVFGSNPL
SDDNFFETRIEIYSPPYMYQGERPVIKTAPTSVTRGTTIDLGVSQEVSKVRLIRPGAYTHVTDTEQRSVALPLVSQANGK
VTVSVPDNANLLPPDWYMLFVDNGENIPSVATWVQVQ

Sequences:

>Translated_517_residues
MVQVCCLAIVIVAGNGPFLSAWATDKYDTWRSHQPDYMRQYGRWDIVADPGSRSIHAALLRTGKILLLAGSGNNQANFDA
KRFETLLWDPTANTFEQVYTPWDVFCAGQAFLPSGELLIAGGTKKYEVLAQDSPDGKKQEYQGLKDSYTFNPQTERYEKT
GDLNFARWYPTLVTLASGQVVAVSGLNEKGDIDPGNTEWFDQANRTWNHNEGLVKEFPTYPSLLLAGDGRLFFSGANAGY
GPASLEARQPGFWSLADGTFQAVPGLPQPEINETAGTVMLPPAQEQRVMFVAGGGVGDTQVATARTAIVDLDDPNPHYVP
GPNTTVAKRYPGVVVLPDDTVLVSGGSTAYRQKDTQTAEIYHPDTNTFTTAADPLVGRDYHSSYLLMPDGRVAVFGSNPL
SDDNFFETRIEIYSPPYMYQGERPVIKTAPTSVTRGTTIDLGVSQEVSKVRLIRPGAYTHVTDTEQRSVALPLVSQANGK
VTVSVPDNANLLPPDWYMLFVDNGENIPSVATWVQVQ
>Mature_517_residues
MVQVCCLAIVIVAGNGPFLSAWATDKYDTWRSHQPDYMRQYGRWDIVADPGSRSIHAALLRTGKILLLAGSGNNQANFDA
KRFETLLWDPTANTFEQVYTPWDVFCAGQAFLPSGELLIAGGTKKYEVLAQDSPDGKKQEYQGLKDSYTFNPQTERYEKT
GDLNFARWYPTLVTLASGQVVAVSGLNEKGDIDPGNTEWFDQANRTWNHNEGLVKEFPTYPSLLLAGDGRLFFSGANAGY
GPASLEARQPGFWSLADGTFQAVPGLPQPEINETAGTVMLPPAQEQRVMFVAGGGVGDTQVATARTAIVDLDDPNPHYVP
GPNTTVAKRYPGVVVLPDDTVLVSGGSTAYRQKDTQTAEIYHPDTNTFTTAADPLVGRDYHSSYLLMPDGRVAVFGSNPL
SDDNFFETRIEIYSPPYMYQGERPVIKTAPTSVTRGTTIDLGVSQEVSKVRLIRPGAYTHVTDTEQRSVALPLVSQANGK
VTVSVPDNANLLPPDWYMLFVDNGENIPSVATWVQVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56549; Mature: 56549

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQVCCLAIVIVAGNGPFLSAWATDKYDTWRSHQPDYMRQYGRWDIVADPGSRSIHAALL
CCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEEE
RTGKILLLAGSGNNQANFDAKRFETLLWDPTANTFEQVYTPWDVFCAGQAFLPSGELLIA
CCCEEEEEECCCCCCCCCCHHHEEEEEECCCCHHHHHHCCCHHEEECCCEECCCCCEEEE
GGTKKYEVLAQDSPDGKKQEYQGLKDSYTFNPQTERYEKTGDLNFARWYPTLVTLASGQV
CCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHCCEEEEECCCCE
VAVSGLNEKGDIDPGNTEWFDQANRTWNHNEGLVKEFPTYPSLLLAGDGRLFFSGANAGY
EEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCEEEEECCCEEEEECCCCCC
GPASLEARQPGFWSLADGTFQAVPGLPQPEINETAGTVMLPPAQEQRVMFVAGGGVGDTQ
CCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCE
VATARTAIVDLDDPNPHYVPGPNTTVAKRYPGVVVLPDDTVLVSGGSTAYRQKDTQTAEI
EEEEEEEEEECCCCCCCCCCCCCCEEHHHCCCEEEECCCEEEEECCCCCEECCCCCEEEE
YHPDTNTFTTAADPLVGRDYHSSYLLMPDGRVAVFGSNPLSDDNFFETRIEIYSPPYMYQ
ECCCCCCEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCEEEC
GERPVIKTAPTSVTRGTTIDLGVSQEVSKVRLIRPGAYTHVTDTEQRSVALPLVSQANGK
CCCCEEEECCCCCCCCCEEEECCCCCCCEEEEECCCCEEEECCCCCCEEEEEEEECCCCE
VTVSVPDNANLLPPDWYMLFVDNGENIPSVATWVQVQ
EEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure
MVQVCCLAIVIVAGNGPFLSAWATDKYDTWRSHQPDYMRQYGRWDIVADPGSRSIHAALL
CCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEEE
RTGKILLLAGSGNNQANFDAKRFETLLWDPTANTFEQVYTPWDVFCAGQAFLPSGELLIA
CCCEEEEEECCCCCCCCCCHHHEEEEEECCCCHHHHHHCCCHHEEECCCEECCCCCEEEE
GGTKKYEVLAQDSPDGKKQEYQGLKDSYTFNPQTERYEKTGDLNFARWYPTLVTLASGQV
CCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHCCEEEEECCCCE
VAVSGLNEKGDIDPGNTEWFDQANRTWNHNEGLVKEFPTYPSLLLAGDGRLFFSGANAGY
EEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCEEEEECCCEEEEECCCCCC
GPASLEARQPGFWSLADGTFQAVPGLPQPEINETAGTVMLPPAQEQRVMFVAGGGVGDTQ
CCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCE
VATARTAIVDLDDPNPHYVPGPNTTVAKRYPGVVVLPDDTVLVSGGSTAYRQKDTQTAEI
EEEEEEEEEECCCCCCCCCCCCCCEEHHHCCCEEEECCCEEEEECCCCCEECCCCCEEEE
YHPDTNTFTTAADPLVGRDYHSSYLLMPDGRVAVFGSNPLSDDNFFETRIEIYSPPYMYQ
ECCCCCCEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCEEEC
GERPVIKTAPTSVTRGTTIDLGVSQEVSKVRLIRPGAYTHVTDTEQRSVALPLVSQANGK
CCCCEEEECCCCCCCCCEEEECCCCCCCEEEEECCCCEEEECCCCCCEEEEEEEECCCCE
VTVSVPDNANLLPPDWYMLFVDNGENIPSVATWVQVQ
EEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA