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The map label for this gene is cspD [C]

Identifier: 158318882

GI number: 158318882

Start: 8746592

End: 8746810

Strand: Direct

Name: cspD [C]

Synonym: Franean1_7165

Alternate gene names: 158318882

Gene position: 8746592-8746810 (Clockwise)

Preceding gene: 158318881

Following gene: 158318884

Centisome position: 97.38

GC content: 64.84

Gene sequence:

>219_bases
ATGACCAAGGGCACCGTGAAGTTCTACAACGCCGAACGGGGGTGGGGAGCGATCTCCTCCCCCGACCTGCCGCCTGGGTT
CGACGCGTGGGTTGGCTTCAGCATGATCGAAATGGACGGGTACCGCTTCCTGGAGGCCGGCGACCGCGTCGAGTTCGACT
ACGAACAGGTCCGACAGGACAGCTTCCGCTACCGCGCGACCCGCGTCCGCAAGCTCTGA

Upstream 100 bases:

>100_bases
CGCCTCCGCGGTTTTCGGGGCCGTCCGGAGCGGCGTGCTGGAACGACCTGTCCCGCGAAACTCGATCGCCGCGCCGGCGC
GAACAGGTCATCCTGGCTCA

Downstream 100 bases:

>100_bases
CAGGTGCCCCCACCTGCGCCGATGCTGTTCACGGGCTGGTCTCACCGGCGGGTGCGGGGGGCGACGCGGCGGGTCGGCGG
GGCGGTGGTCGGGTCGTCCG

Product: cold-shock DNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MTKGTVKFYNAERGWGAISSPDLPPGFDAWVGFSMIEMDGYRFLEAGDRVEFDYEQVRQDSFRYRATRVRKL

Sequences:

>Translated_72_residues
MTKGTVKFYNAERGWGAISSPDLPPGFDAWVGFSMIEMDGYRFLEAGDRVEFDYEQVRQDSFRYRATRVRKL
>Mature_71_residues
TKGTVKFYNAERGWGAISSPDLPPGFDAWVGFSMIEMDGYRFLEAGDRVEFDYEQVRQDSFRYRATRVRKL

Specific function: Inhibits DNA Replication At Both Initiation And Elongation Steps, Most Probably By Binding To The Opened, Single- Stranded Regions At Replication Forks. Plays A Regulatory Role In Chromosomal Replication In Nutrient-Depleted Cells. [C]

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8420; Mature: 8288

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKGTVKFYNAERGWGAISSPDLPPGFDAWVGFSMIEMDGYRFLEAGDRVEFDYEQVRQD
CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCEECHHHHHHH
SFRYRATRVRKL
HHHHHHHHHCCC
>Mature Secondary Structure 
TKGTVKFYNAERGWGAISSPDLPPGFDAWVGFSMIEMDGYRFLEAGDRVEFDYEQVRQD
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCEECHHHHHHH
SFRYRATRVRKL
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA